| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175370
Identifier: 126175370
GI number: 126175370
Start: 3709487
End: 3710281
Strand: Direct
Name: 126175370
Synonym: Sbal_3169
Alternate gene names: NA
Gene position: 3709487-3710281 (Clockwise)
Preceding gene: 126175369
Following gene: 126175371
Centisome position: 72.35
GC content: 46.67
Gene sequence:
>795_bases ATGGGGAAAAAATTACTCACATTATCTGGCTTTTGCTTGTTTATGCTCGGCTTTATCCACCCCGCATTTGCAGGTCGAGA ACTCCATTTAGTAGCCACTAACTACCCTCCTTTTTATGCCGATGCTTTACCCGAACAAGGCGGCGTCGCCCAAGTGGTCA AAGAAGCCTTTAAACGCCAGGGTTACAATGCCAGCCTTAAGTTTTATCCCTTCGCTCGCGCAGCCCTACTCGTTAAAACG GGCCAAGCCGATGGCATCATTGGACTCTGGTATCGTAAAGAGCGTGAGCAATGGGCCCAATATTCTGCGCCAATCCAACC CGTACAAATCGTGTTTTATAAACGTAAAGATGCGCCGCTGAGCTTTAGTCAGCTCTCTGAGCTCAAGCCCTACACGATTG GCATAGGTCGCGGTTACGCTAATCCACCCGAAATCTTCGCCGCAGGACTCACCACCGAAGAAGGTAATTCGGATGAAATG AACCTCAAGAAGCTATTTTTAAAGCGTATTGATTTAGTCTTGATTGGCCATAACTTAGCGAGGTATTTAATTAAAAAAGG CCCAGCTGAATATAACGATGCCTTTGAACAAGTCGGTCAACCCATAGCGACTGAGGTATTTCACTTAGGGGTGTCTCTGG CCGTGACAGATCATCAGCAGTTAGTAACGGATTTTAATCAAGGCTTAGAAAGTATGCGCAGCGATGGTCGATTAGCTTCC ATTTTGAGCCAATATCCTCAAGTTGAAACGACTCAAGCACCAGTCGAAAAAACGCGTACTGAGGTCCATCCCTAG
Upstream 100 bases:
>100_bases TCTCAACATGCACTCATCTTAATATCCATAAGTTCGCCAGTTTTTATTAACTCTGACTATACTCAAGCCAAGTGCGACTC ACCTCAGTGCTGGAGTAGAA
Downstream 100 bases:
>100_bases CGCACGTGGGTCTTCTCGCACTGGCCCTTTGCACAAAAAAACCGCAAAAGCCGCGTTGAATTGTGTTCAAGGCTCAAAAA ACACAATTTCTTTCATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter; Amino Acid ABC Transporter; Succinate Dehydrogenase; Sugar ABC Transporter Periplasmic Protein; ABC-Type Amino Acid Transport/Signal Transduction System; ABC-Type Transporter Periplasmic Component
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MGKKLLTLSGFCLFMLGFIHPAFAGRELHLVATNYPPFYADALPEQGGVAQVVKEAFKRQGYNASLKFYPFARAALLVKT GQADGIIGLWYRKEREQWAQYSAPIQPVQIVFYKRKDAPLSFSQLSELKPYTIGIGRGYANPPEIFAAGLTTEEGNSDEM NLKKLFLKRIDLVLIGHNLARYLIKKGPAEYNDAFEQVGQPIATEVFHLGVSLAVTDHQQLVTDFNQGLESMRSDGRLAS ILSQYPQVETTQAPVEKTRTEVHP
Sequences:
>Translated_264_residues MGKKLLTLSGFCLFMLGFIHPAFAGRELHLVATNYPPFYADALPEQGGVAQVVKEAFKRQGYNASLKFYPFARAALLVKT GQADGIIGLWYRKEREQWAQYSAPIQPVQIVFYKRKDAPLSFSQLSELKPYTIGIGRGYANPPEIFAAGLTTEEGNSDEM NLKKLFLKRIDLVLIGHNLARYLIKKGPAEYNDAFEQVGQPIATEVFHLGVSLAVTDHQQLVTDFNQGLESMRSDGRLAS ILSQYPQVETTQAPVEKTRTEVHP >Mature_263_residues GKKLLTLSGFCLFMLGFIHPAFAGRELHLVATNYPPFYADALPEQGGVAQVVKEAFKRQGYNASLKFYPFARAALLVKTG QADGIIGLWYRKEREQWAQYSAPIQPVQIVFYKRKDAPLSFSQLSELKPYTIGIGRGYANPPEIFAAGLTTEEGNSDEMN LKKLFLKRIDLVLIGHNLARYLIKKGPAEYNDAFEQVGQPIATEVFHLGVSLAVTDHQQLVTDFNQGLESMRSDGRLASI LSQYPQVETTQAPVEKTRTEVHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29481; Mature: 29350
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKLLTLSGFCLFMLGFIHPAFAGRELHLVATNYPPFYADALPEQGGVAQVVKEAFKRQ CCCEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHC GYNASLKFYPFARAALLVKTGQADGIIGLWYRKEREQWAQYSAPIQPVQIVFYKRKDAPL CCCCCEEECCHHHEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEECCCCCC SFSQLSELKPYTIGIGRGYANPPEIFAAGLTTEEGNSDEMNLKKLFLKRIDLVLIGHNLA CHHHHHHCCCEEEEECCCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHEECHHHH RYLIKKGPAEYNDAFEQVGQPIATEVFHLGVSLAVTDHQQLVTDFNQGLESMRSDGRLAS HHHHHCCCCHHHHHHHHHCCHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHCCCHHHH ILSQYPQVETTQAPVEKTRTEVHP HHHHCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure GKKLLTLSGFCLFMLGFIHPAFAGRELHLVATNYPPFYADALPEQGGVAQVVKEAFKRQ CCEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHC GYNASLKFYPFARAALLVKTGQADGIIGLWYRKEREQWAQYSAPIQPVQIVFYKRKDAPL CCCCCEEECCHHHEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCCCCEEEEEEECCCCCC SFSQLSELKPYTIGIGRGYANPPEIFAAGLTTEEGNSDEMNLKKLFLKRIDLVLIGHNLA CHHHHHHCCCEEEEECCCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHEECHHHH RYLIKKGPAEYNDAFEQVGQPIATEVFHLGVSLAVTDHQQLVTDFNQGLESMRSDGRLAS HHHHHCCCCHHHHHHHHHCCHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHCCCHHHH ILSQYPQVETTQAPVEKTRTEVHP HHHHCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA