| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175367
Identifier: 126175367
GI number: 126175367
Start: 3706529
End: 3707221
Strand: Direct
Name: 126175367
Synonym: Sbal_3166
Alternate gene names: NA
Gene position: 3706529-3707221 (Clockwise)
Preceding gene: 126175366
Following gene: 126175368
Centisome position: 72.29
GC content: 53.1
Gene sequence:
>693_bases ATGACTACCCCAACAACTCCTTCTGCTAGCACGGCCAACAGCACACCAGCGGCCAAAGTGCGTACTCTGCACGCGATTAT CGACCCTTTATGTGGTTGGTGTTATGCCGCAGCGCCGTTACTCGATGCTGCAGCCAAAGCTGGCTTTACCATTAAGCTCC ACGGCGGCGGTATGCTCACAGGCCCAAGACGCAAACAAATCGATGCCAACTGGCGCGACTATGTTATGCCCCACGATCTG CGCATTGGCGAGCTAACCGGACAGCCTTTTGGTGAGAACTACTTTGATGGTCTGCTGCGCGATACCACAGTCGTACTCGA CTCGGCGCCCCCCATTAAAGCCATGCTCGCAGTCGATGCTATGGGCGGCGACAGTTTGGCTTATCTACACTCAGTACAAC TAGCCCATTACCGCGATGGTCACAGTGCCAGTGATGAGGGCAATCTCGCCAGCTTAGCCGCGGAACTTGGGCTCGACCCG ATAAGCTTTGCACAGCATTATGCCCAAGGAGATGACAAGCTGTATGAGCATATCGTTGAGTCCAGAGCATTATTGAATCT GATAGGTGCCCAAGGTTTCCCTTCGATGGCTATAGAGGATAATGACGGCAACATCACCGCCATTAATATCAACCGCTTCT ACGGCCAACCCGCCCAGTGGTTAAGCCATCTTGAAGCGCAATTTGAGTCATAA
Upstream 100 bases:
>100_bases GCACCTAAATAACGGTACCAAACTAACGATTTTAATCGATGATATCAAAGGGCTTAAGACGCTAATGTAGCGACGAACTT AAGCCAAAAGGTTTAACACT
Downstream 100 bases:
>100_bases TCATGCCAATGCTTAATGGTATTTCAGAAGGCTCATTAGTGAGTGAGCTTGCTCAGTTAAGTCTTATAGAAACAGCAAGG CAGACTGATGCGAATCTTGC
Product: putative protein-disulfide isomerase
Products: NA
Alternate protein names: DSBA Oxidoreductase; Thioredoxin Domain-Containing Protein; DSBA-Like Thioredoxin Domain-Containing Protein; Thioredoxin Domain-Containing Protein DsbA Family
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTTPTTPSASTANSTPAAKVRTLHAIIDPLCGWCYAAAPLLDAAAKAGFTIKLHGGGMLTGPRRKQIDANWRDYVMPHDL RIGELTGQPFGENYFDGLLRDTTVVLDSAPPIKAMLAVDAMGGDSLAYLHSVQLAHYRDGHSASDEGNLASLAAELGLDP ISFAQHYAQGDDKLYEHIVESRALLNLIGAQGFPSMAIEDNDGNITAININRFYGQPAQWLSHLEAQFES
Sequences:
>Translated_230_residues MTTPTTPSASTANSTPAAKVRTLHAIIDPLCGWCYAAAPLLDAAAKAGFTIKLHGGGMLTGPRRKQIDANWRDYVMPHDL RIGELTGQPFGENYFDGLLRDTTVVLDSAPPIKAMLAVDAMGGDSLAYLHSVQLAHYRDGHSASDEGNLASLAAELGLDP ISFAQHYAQGDDKLYEHIVESRALLNLIGAQGFPSMAIEDNDGNITAININRFYGQPAQWLSHLEAQFES >Mature_229_residues TTPTTPSASTANSTPAAKVRTLHAIIDPLCGWCYAAAPLLDAAAKAGFTIKLHGGGMLTGPRRKQIDANWRDYVMPHDLR IGELTGQPFGENYFDGLLRDTTVVLDSAPPIKAMLAVDAMGGDSLAYLHSVQLAHYRDGHSASDEGNLASLAAELGLDPI SFAQHYAQGDDKLYEHIVESRALLNLIGAQGFPSMAIEDNDGNITAININRFYGQPAQWLSHLEAQFES
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24748; Mature: 24617
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTTPSASTANSTPAAKVRTLHAIIDPLCGWCYAAAPLLDAAAKAGFTIKLHGGGMLT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEC GPRRKQIDANWRDYVMPHDLRIGELTGQPFGENYFDGLLRDTTVVLDSAPPIKAMLAVDA CCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCHHHHHHHHCCEEEEECCCCCEEEEEEEC MGGDSLAYLHSVQLAHYRDGHSASDEGNLASLAAELGLDPISFAQHYAQGDDKLYEHIVE CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH SRALLNLIGAQGFPSMAIEDNDGNITAININRFYGQPAQWLSHLEAQFES HHHHHHHHCCCCCCCEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure TTPTTPSASTANSTPAAKVRTLHAIIDPLCGWCYAAAPLLDAAAKAGFTIKLHGGGMLT CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEC GPRRKQIDANWRDYVMPHDLRIGELTGQPFGENYFDGLLRDTTVVLDSAPPIKAMLAVDA CCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCHHHHHHHHCCEEEEECCCCCEEEEEEEC MGGDSLAYLHSVQLAHYRDGHSASDEGNLASLAAELGLDPISFAQHYAQGDDKLYEHIVE CCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH SRALLNLIGAQGFPSMAIEDNDGNITAININRFYGQPAQWLSHLEAQFES HHHHHHHHCCCCCCCEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA