| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175338
Identifier: 126175338
GI number: 126175338
Start: 3674902
End: 3676185
Strand: Reverse
Name: 126175338
Synonym: Sbal_3137
Alternate gene names: NA
Gene position: 3676185-3674902 (Counterclockwise)
Preceding gene: 126175340
Following gene: 126175337
Centisome position: 71.7
GC content: 44.16
Gene sequence:
>1284_bases ATGAAAACACAGATCGAGTCTAAAAATCTCACACTACGTCAGATAAATTTTATAAGTAGGGTATATAGAAACTTAGCGGT ATTGGTTTTTACCCTAATTGCCTCATTTTCACCCCTCGCCATCGCGGCAACCTATCAAATGTCGACCCCTGCAAATGATG ATGGTCAAGGAAACTTCCTATTCCTTGATAGGCACCATGTCGATTGCGGCGTTAATGCAATGAGTTCACTTCACTTGTTC AGACCTTCATTAACCGAAATTGCTTATGAATATCAGTGCACCGAAATGGGCAATGACAACAGCACTAACGTCTTTACTAC TGACAATGATGATGGTGGGGGCAATGTTATTTACTTGGATCGACACACTATAAATTGTGAGAATAAAGGGCTTCAATATC TGCATTTAGAACGTCCGACCGCGAGCACTGCTCGTTATAATTACCGCTGTGGCAATCAAACGCTGAGTAATGTGACGGAT TATTTTACTGCTGCAGATGACGATGGTGCTGGTAACGCAGTTTTTCTTGATAGACACAATGTGAGTTGTCCAAACAATAA GGTACTGAGCTACCTTCGACTGGAAAGACCCACCAGCAATACTATCCGGTATCATTACAAGTGCGGAACTTATAGTGATG CAACGGTTCATGGATTTACAGGAGCCTTTGCTCCGGCTCATTGGAGCATATCGGGTGTCGCAGCTTCAAGCATGAGCAGC TCGGCATTGACAGCAGTAGTCAATTCCGGCGGAGGTGGTGTAACGGCATCAATCACCATACCCTTAAAGGGAACCATCAA CTTTGACTGGATGATATCCATCTACTCAGCTGGTCAATATGGTGATGTCATCAAGTACCTGATAAATGGCGTGTCTTACA ATCTCTCTACAGCCGGCAGTGCTTCTGGTTCAGCTCAGGGTATCGAAGTTAATACCGGTGATTTATTTGAACTTCTGACA TGGGGGACTACGCGGTCTTCCAGTTATAGTGCCAAGTTCGATAATTTCAGCTTTGTACCATCAGCAGCAATTACTCCCCA ATGTGCCTTTGCAGGTGACAACCAAGGTCGTAACGATGCAGGCTTTACTGGACAAACTTTTGTTTACAGTAACACCAGTT ACGGTACCAACAGATTTATGTGGGACGGCATTAACAAAGGTGAAGTGCCTATAGGTACAGGCTCAGTAACCGATGAAAAT GGCAACGTATTTACTTTAGGGGCGCAAGTATCACATCCATACGCAGACCTGTGGTATTACGAGATTTGCGTAAACATGCC CTGA
Upstream 100 bases:
>100_bases AACATTCTTCTACTACATTTGTTTCTCTTATAGGTGATCCAGACTACCTATACGATTGTGTAAACCAAATCGATGAAACA TCTACCAAAAGGAAAGGGTA
Downstream 100 bases:
>100_bases GCACTGCTAATTTAACCTGAACTCAGGATTAGAAAGTTAGAACTAGAGGCCCTCTTAGTGCTCGGATTTTTCGACCAAGA ATCATCCCATCACAAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MKTQIESKNLTLRQINFISRVYRNLAVLVFTLIASFSPLAIAATYQMSTPANDDGQGNFLFLDRHHVDCGVNAMSSLHLF RPSLTEIAYEYQCTEMGNDNSTNVFTTDNDDGGGNVIYLDRHTINCENKGLQYLHLERPTASTARYNYRCGNQTLSNVTD YFTAADDDGAGNAVFLDRHNVSCPNNKVLSYLRLERPTSNTIRYHYKCGTYSDATVHGFTGAFAPAHWSISGVAASSMSS SALTAVVNSGGGGVTASITIPLKGTINFDWMISIYSAGQYGDVIKYLINGVSYNLSTAGSASGSAQGIEVNTGDLFELLT WGTTRSSSYSAKFDNFSFVPSAAITPQCAFAGDNQGRNDAGFTGQTFVYSNTSYGTNRFMWDGINKGEVPIGTGSVTDEN GNVFTLGAQVSHPYADLWYYEICVNMP
Sequences:
>Translated_427_residues MKTQIESKNLTLRQINFISRVYRNLAVLVFTLIASFSPLAIAATYQMSTPANDDGQGNFLFLDRHHVDCGVNAMSSLHLF RPSLTEIAYEYQCTEMGNDNSTNVFTTDNDDGGGNVIYLDRHTINCENKGLQYLHLERPTASTARYNYRCGNQTLSNVTD YFTAADDDGAGNAVFLDRHNVSCPNNKVLSYLRLERPTSNTIRYHYKCGTYSDATVHGFTGAFAPAHWSISGVAASSMSS SALTAVVNSGGGGVTASITIPLKGTINFDWMISIYSAGQYGDVIKYLINGVSYNLSTAGSASGSAQGIEVNTGDLFELLT WGTTRSSSYSAKFDNFSFVPSAAITPQCAFAGDNQGRNDAGFTGQTFVYSNTSYGTNRFMWDGINKGEVPIGTGSVTDEN GNVFTLGAQVSHPYADLWYYEICVNMP >Mature_427_residues MKTQIESKNLTLRQINFISRVYRNLAVLVFTLIASFSPLAIAATYQMSTPANDDGQGNFLFLDRHHVDCGVNAMSSLHLF RPSLTEIAYEYQCTEMGNDNSTNVFTTDNDDGGGNVIYLDRHTINCENKGLQYLHLERPTASTARYNYRCGNQTLSNVTD YFTAADDDGAGNAVFLDRHNVSCPNNKVLSYLRLERPTSNTIRYHYKCGTYSDATVHGFTGAFAPAHWSISGVAASSMSS SALTAVVNSGGGGVTASITIPLKGTINFDWMISIYSAGQYGDVIKYLINGVSYNLSTAGSASGSAQGIEVNTGDLFELLT WGTTRSSSYSAKFDNFSFVPSAAITPQCAFAGDNQGRNDAGFTGQTFVYSNTSYGTNRFMWDGINKGEVPIGTGSVTDEN GNVFTLGAQVSHPYADLWYYEICVNMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46399; Mature: 46399
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTQIESKNLTLRQINFISRVYRNLAVLVFTLIASFSPLAIAATYQMSTPANDDGQGNFL CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEE FLDRHHVDCGVNAMSSLHLFRPSLTEIAYEYQCTEMGNDNSTNVFTTDNDDGGGNVIYLD EEECCCCCCCCHHHHHHHHCCCCHHHHEEEEEEEECCCCCCCEEEECCCCCCCCEEEEEE RHTINCENKGLQYLHLERPTASTARYNYRCGNQTLSNVTDYFTAADDDGAGNAVFLDRHN CEEECCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHEECCCCCCCCCEEEEECCC VSCPNNKVLSYLRLERPTSNTIRYHYKCGTYSDATVHGFTGAFAPAHWSISGVAASSMSS CCCCCHHHEEEEEECCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCCCC SALTAVVNSGGGGVTASITIPLKGTINFDWMISIYSAGQYGDVIKYLINGVSYNLSTAGS CEEEEEEECCCCCEEEEEEEEEEEEECEEEEEEEECCCCHHHHHHHHHCCCEEEECCCCC ASGSAQGIEVNTGDLFELLTWGTTRSSSYSAKFDNFSFVPSAAITPQCAFAGDNQGRNDA CCCCCCCEEECCCCHHHHHCCCCCCCCCCEECCCCEEECCCCCCCCCEEECCCCCCCCCC GFTGQTFVYSNTSYGTNRFMWDGINKGEVPIGTGSVTDENGNVFTLGAQVSHPYADLWYY CCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCEECCCCCEEEEECCCCCCHHHEEEE EICVNMP EEEEECC >Mature Secondary Structure MKTQIESKNLTLRQINFISRVYRNLAVLVFTLIASFSPLAIAATYQMSTPANDDGQGNFL CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEE FLDRHHVDCGVNAMSSLHLFRPSLTEIAYEYQCTEMGNDNSTNVFTTDNDDGGGNVIYLD EEECCCCCCCCHHHHHHHHCCCCHHHHEEEEEEEECCCCCCCEEEECCCCCCCCEEEEEE RHTINCENKGLQYLHLERPTASTARYNYRCGNQTLSNVTDYFTAADDDGAGNAVFLDRHN CEEECCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHEECCCCCCCCCEEEEECCC VSCPNNKVLSYLRLERPTSNTIRYHYKCGTYSDATVHGFTGAFAPAHWSISGVAASSMSS CCCCCHHHEEEEEECCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCEEEEEEECCCCCC SALTAVVNSGGGGVTASITIPLKGTINFDWMISIYSAGQYGDVIKYLINGVSYNLSTAGS CEEEEEEECCCCCEEEEEEEEEEEEECEEEEEEEECCCCHHHHHHHHHCCCEEEECCCCC ASGSAQGIEVNTGDLFELLTWGTTRSSSYSAKFDNFSFVPSAAITPQCAFAGDNQGRNDA CCCCCCCEEECCCCHHHHHCCCCCCCCCCEECCCCEEECCCCCCCCCEEECCCCCCCCCC GFTGQTFVYSNTSYGTNRFMWDGINKGEVPIGTGSVTDENGNVFTLGAQVSHPYADLWYY CCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCEECCCCCEEEEECCCCCCHHHEEEE EICVNMP EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA