Click here to switch to the map view.

The map label for this gene is 126175307

Identifier: 126175307

GI number: 126175307

Start: 3633831

End: 3634340

Strand: Direct

Name: 126175307

Synonym: Sbal_3106

Alternate gene names: NA

Gene position: 3633831-3634340 (Clockwise)

Preceding gene: 126175306

Following gene: 126175310

Centisome position: 70.87

GC content: 50.39

Gene sequence:

>510_bases
ATGCTCAATACCGAACATGCTAACTTTCCCCGTGCGGGATTCTTTCGCCGCTTAGGTGCTGCCGTTTACGATTCGCTGTT
AGCCGTGGCCGTTTATATGGTTTCTGGCGCTGTGGGCTTTGGCATTTTCTACGGCCTTACTGCTTCTGGATTGGCTGGCA
TGAATGGCTTTGAGCATGTCTCTGACGCGCTCAATGGCACACCGATTTACCATGGTATTTATCAACTCTGGCTCGTCTTG
TGTGTTGGCACTTTCTACGCCTTGTTCTGGAGTAAGGGCGGTCAAACCTTAGGGATGCGCGCTTGGCGGCTTAAGATCCA
ACATCCAAACGGCCAAAACTTAAGCATGATCACGGCCTACGCTCGCATCGTTTGGTCACTGCTCGGCATTGGTAATCTGT
GGATCCTCATCAATGGCAATAAGCTTGCCCTACAAGATAGTATGACCCGCTCAGAAGTGGTTGTCTTGTCTAAAGAAGCC
AACCAAATGCGTAACTGGCACGGGGCATAA

Upstream 100 bases:

>100_bases
CTTTAGCAATATCCACTTTGTTAGAGACGAAGAACCCGAAGCCTAGGCAGGTTATTCATTTTTGTATTCGCTTTTAGCAC
TTTAAAAACAGGACACTGTG

Downstream 100 bases:

>100_bases
GTTTATTCTTAAGCAAATCCGAAATACAAAAAACGACGCAAAAGCGTCGTTTTTTTATGAGCTATTTTTTATGGACTGTT
CTTATAAACTATTCTTATAA

Product: RDD domain-containing protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; Proline-Rich Antigen; RDD Family

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MLNTEHANFPRAGFFRRLGAAVYDSLLAVAVYMVSGAVGFGIFYGLTASGLAGMNGFEHVSDALNGTPIYHGIYQLWLVL
CVGTFYALFWSKGGQTLGMRAWRLKIQHPNGQNLSMITAYARIVWSLLGIGNLWILINGNKLALQDSMTRSEVVVLSKEA
NQMRNWHGA

Sequences:

>Translated_169_residues
MLNTEHANFPRAGFFRRLGAAVYDSLLAVAVYMVSGAVGFGIFYGLTASGLAGMNGFEHVSDALNGTPIYHGIYQLWLVL
CVGTFYALFWSKGGQTLGMRAWRLKIQHPNGQNLSMITAYARIVWSLLGIGNLWILINGNKLALQDSMTRSEVVVLSKEA
NQMRNWHGA
>Mature_169_residues
MLNTEHANFPRAGFFRRLGAAVYDSLLAVAVYMVSGAVGFGIFYGLTASGLAGMNGFEHVSDALNGTPIYHGIYQLWLVL
CVGTFYALFWSKGGQTLGMRAWRLKIQHPNGQNLSMITAYARIVWSLLGIGNLWILINGNKLALQDSMTRSEVVVLSKEA
NQMRNWHGA

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18614; Mature: 18614

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNTEHANFPRAGFFRRLGAAVYDSLLAVAVYMVSGAVGFGIFYGLTASGLAGMNGFEHV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
SDALNGTPIYHGIYQLWLVLCVGTFYALFWSKGGQTLGMRAWRLKIQHPNGQNLSMITAY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEEEEEECCCCCCHHHHHHH
ARIVWSLLGIGNLWILINGNKLALQDSMTRSEVVVLSKEANQMRNWHGA
HHHHHHHHCCCCEEEEEECCEEEECCCCCCCCEEEEECCHHHHHCCCCC
>Mature Secondary Structure
MLNTEHANFPRAGFFRRLGAAVYDSLLAVAVYMVSGAVGFGIFYGLTASGLAGMNGFEHV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
SDALNGTPIYHGIYQLWLVLCVGTFYALFWSKGGQTLGMRAWRLKIQHPNGQNLSMITAY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECEEEEEEEEECCCCCCHHHHHHH
ARIVWSLLGIGNLWILINGNKLALQDSMTRSEVVVLSKEANQMRNWHGA
HHHHHHHHCCCCEEEEEECCEEEECCCCCCCCEEEEECCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA