| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175295
Identifier: 126175295
GI number: 126175295
Start: 3620179
End: 3620931
Strand: Direct
Name: 126175295
Synonym: Sbal_3094
Alternate gene names: NA
Gene position: 3620179-3620931 (Clockwise)
Preceding gene: 126175294
Following gene: 126175299
Centisome position: 70.6
GC content: 46.08
Gene sequence:
>753_bases ATGGTTAAGCGATGTTTGCAGTATAAACACTTAGTTCGATTTGCCTTGTTTGCCCTTTGCTTTACTCAACCACACGCCTA TGCGGAGCAGCTCAAATACAATATCACTGGCTCCTATTCTTGGTATCCGTATTTTATCGGTGATCAAGCCGAGGCGCCGG GGATGATCACTGAGCTTATCCCGCTGATTCTATCCTTAGCTAAAATCGACGGTGAAATCCTCACCTTGCCGCCAAAGCGC ACTAATAACGCTCTGGAAACTGGTCAACTCGACTTTGATATCGTCAGCCCTAGTTGGTTTGAAAAGCAGGATTTGGGGCC GCTGTTTGTCAAATCCGCCCCCATAATGCAAATCACCGAATATGTGGTCACCCTGCCTGAAAATGTCAGTAAATATAAGG ATATCGACCAGATAAAAGGCAAACAAATCGGGACTGTGCGCGGTTATTTATACCACGACGATAAGGACTTTATCCGTGCC GACTTTACCTCTGAGCAAGAGTTAGTCAAAGCCTTAGATAAACACAGAGTCGATGCGATTATTTCCGGTAATTATCCAGC CTTGTATTGGTCGACTCAGTTGCGGATCCCTGTCGCCCTTGCGGCGGTGCATTCCGATGGAGACTTAGTGTTTAGGTTAC GTAAGGAACATGCCGATTTGCTGCCTGCCATCAATCAAGCGATAGCAACCCTAAAAGCCAACGGTAAGATTGATGCGATA GTCAAAAATTACACCCAAACACTGACAAGCTGA
Upstream 100 bases:
>100_bases GACTGATTGTGACCCAATAAACAATTTATTCACACAGTTTAGGTAGAATGGCCATCGGATAGGCATTGGCTAAAGCAGAG ATAATAAGGATAAAAGCAAT
Downstream 100 bases:
>100_bases TCCTATGCTCAAGCATTGGCGTTATTAAGACCACAGTTACAGCTTGGGCTTAGCTCAATCGTTTTTTTTCGTTATAACAT CATCGGCATGCCATCTGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MVKRCLQYKHLVRFALFALCFTQPHAYAEQLKYNITGSYSWYPYFIGDQAEAPGMITELIPLILSLAKIDGEILTLPPKR TNNALETGQLDFDIVSPSWFEKQDLGPLFVKSAPIMQITEYVVTLPENVSKYKDIDQIKGKQIGTVRGYLYHDDKDFIRA DFTSEQELVKALDKHRVDAIISGNYPALYWSTQLRIPVALAAVHSDGDLVFRLRKEHADLLPAINQAIATLKANGKIDAI VKNYTQTLTS
Sequences:
>Translated_250_residues MVKRCLQYKHLVRFALFALCFTQPHAYAEQLKYNITGSYSWYPYFIGDQAEAPGMITELIPLILSLAKIDGEILTLPPKR TNNALETGQLDFDIVSPSWFEKQDLGPLFVKSAPIMQITEYVVTLPENVSKYKDIDQIKGKQIGTVRGYLYHDDKDFIRA DFTSEQELVKALDKHRVDAIISGNYPALYWSTQLRIPVALAAVHSDGDLVFRLRKEHADLLPAINQAIATLKANGKIDAI VKNYTQTLTS >Mature_250_residues MVKRCLQYKHLVRFALFALCFTQPHAYAEQLKYNITGSYSWYPYFIGDQAEAPGMITELIPLILSLAKIDGEILTLPPKR TNNALETGQLDFDIVSPSWFEKQDLGPLFVKSAPIMQITEYVVTLPENVSKYKDIDQIKGKQIGTVRGYLYHDDKDFIRA DFTSEQELVKALDKHRVDAIISGNYPALYWSTQLRIPVALAAVHSDGDLVFRLRKEHADLLPAINQAIATLKANGKIDAI VKNYTQTLTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28266; Mature: 28266
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRCLQYKHLVRFALFALCFTQPHAYAEQLKYNITGSYSWYPYFIGDQAEAPGMITELI CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEECCCCEEEEEEECCCCCCCCHHHHHH PLILSLAKIDGEILTLPPKRTNNALETGQLDFDIVSPSWFEKQDLGPLFVKSAPIMQITE HHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCHHHHHH YVVTLPENVSKYKDIDQIKGKQIGTVRGYLYHDDKDFIRADFTSEQELVKALDKHRVDAI HHHHCCHHHHHHHHHHHHCCCEECEEEEEEEECCCHHEEECCCCHHHHHHHHHHHCCEEE ISGNYPALYWSTQLRIPVALAAVHSDGDLVFRLRKEHADLLPAINQAIATLKANGKIDAI EECCCCEEEEEEEEECEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHH VKNYTQTLTS HHHHHHHHCC >Mature Secondary Structure MVKRCLQYKHLVRFALFALCFTQPHAYAEQLKYNITGSYSWYPYFIGDQAEAPGMITELI CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEECCCCEEEEEEECCCCCCCCHHHHHH PLILSLAKIDGEILTLPPKRTNNALETGQLDFDIVSPSWFEKQDLGPLFVKSAPIMQITE HHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEECCCCHHHHHH YVVTLPENVSKYKDIDQIKGKQIGTVRGYLYHDDKDFIRADFTSEQELVKALDKHRVDAI HHHHCCHHHHHHHHHHHHCCCEECEEEEEEEECCCHHEEECCCCHHHHHHHHHHHCCEEE ISGNYPALYWSTQLRIPVALAAVHSDGDLVFRLRKEHADLLPAINQAIATLKANGKIDAI EECCCCEEEEEEEEECEEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHH VKNYTQTLTS HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA