Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is yggL [H]

Identifier: 126175239

GI number: 126175239

Start: 3561931

End: 3562257

Strand: Reverse

Name: yggL [H]

Synonym: Sbal_3037

Alternate gene names: 126175239

Gene position: 3562257-3561931 (Counterclockwise)

Preceding gene: 126175240

Following gene: 126175238

Centisome position: 69.48

GC content: 44.04

Gene sequence:

>327_bases
ATGGCAACTAATCGTAGCCGTCGTTTACGTAAGAAAATGCGCGTTGATGAATTCCAAGAGTTAGGTTTTGATATGGCTTG
GACTTTTGATGCATCTGTATCAGAAGCCGATATCGATGCAACAGTGGATAAATTCATCGATGAAGTGATCGAAACCCGTA
AGTTAGGTTTCCATGGCGGCGGTCACATCGAATGGGAAGGCATTATCGCAACCCAAACGATCGGCAAATGTACCGAAGAA
GATATTGCTGCAGTTAAGGCATTCTGGGCGAACCAAAAAGTTTCTCAGGTTGAAGTTAGCGAACTGTACGACATTTGGTG
GGGTTAA

Upstream 100 bases:

>100_bases
GATTGGGTCACGGTGTATGGGATCTGATGTTTGAGCGTATCGCTTAATCTAGATATTTCAATTGATTAATTAGTTTTTTA
ACACAACGGGGAAAGTCACT

Downstream 100 bases:

>100_bases
TGCCCGAGTTGGCATTACTTGAGGAAGTGGTCGAGAAAGTTCGACCCTTGCTCGGCCAAGGAAAGGTTGCAGATTACATC
CCCGCACTGGCCAGCGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MATNRSRRLRKKMRVDEFQELGFDMAWTFDASVSEADIDATVDKFIDEVIETRKLGFHGGGHIEWEGIIATQTIGKCTEE
DIAAVKAFWANQKVSQVEVSELYDIWWG

Sequences:

>Translated_108_residues
MATNRSRRLRKKMRVDEFQELGFDMAWTFDASVSEADIDATVDKFIDEVIETRKLGFHGGGHIEWEGIIATQTIGKCTEE
DIAAVKAFWANQKVSQVEVSELYDIWWG
>Mature_107_residues
ATNRSRRLRKKMRVDEFQELGFDMAWTFDASVSEADIDATVDKFIDEVIETRKLGFHGGGHIEWEGIIATQTIGKCTEED
IAAVKAFWANQKVSQVEVSELYDIWWG

Specific function: Unknown

COG id: COG3171

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0341 [H]

Homologues:

Organism=Escherichia coli, GI87082190, Length=107, Percent_Identity=58.8785046728972, Blast_Score=133, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007416 [H]

Pfam domain/function: PF04320 DUF469 [H]

EC number: NA

Molecular weight: Translated: 12372; Mature: 12241

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNRSRRLRKKMRVDEFQELGFDMAWTFDASVSEADIDATVDKFIDEVIETRKLGFHGG
CCCCHHHHHHHHHCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GHIEWEGIIATQTIGKCTEEDIAAVKAFWANQKVSQVEVSELYDIWWG
CEEEECEEEECHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATNRSRRLRKKMRVDEFQELGFDMAWTFDASVSEADIDATVDKFIDEVIETRKLGFHGG
CCCHHHHHHHHHCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GHIEWEGIIATQTIGKCTEEDIAAVKAFWANQKVSQVEVSELYDIWWG
CEEEECEEEECHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 2001994 [H]