| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yggL [H]
Identifier: 126175239
GI number: 126175239
Start: 3561931
End: 3562257
Strand: Reverse
Name: yggL [H]
Synonym: Sbal_3037
Alternate gene names: 126175239
Gene position: 3562257-3561931 (Counterclockwise)
Preceding gene: 126175240
Following gene: 126175238
Centisome position: 69.48
GC content: 44.04
Gene sequence:
>327_bases ATGGCAACTAATCGTAGCCGTCGTTTACGTAAGAAAATGCGCGTTGATGAATTCCAAGAGTTAGGTTTTGATATGGCTTG GACTTTTGATGCATCTGTATCAGAAGCCGATATCGATGCAACAGTGGATAAATTCATCGATGAAGTGATCGAAACCCGTA AGTTAGGTTTCCATGGCGGCGGTCACATCGAATGGGAAGGCATTATCGCAACCCAAACGATCGGCAAATGTACCGAAGAA GATATTGCTGCAGTTAAGGCATTCTGGGCGAACCAAAAAGTTTCTCAGGTTGAAGTTAGCGAACTGTACGACATTTGGTG GGGTTAA
Upstream 100 bases:
>100_bases GATTGGGTCACGGTGTATGGGATCTGATGTTTGAGCGTATCGCTTAATCTAGATATTTCAATTGATTAATTAGTTTTTTA ACACAACGGGGAAAGTCACT
Downstream 100 bases:
>100_bases TGCCCGAGTTGGCATTACTTGAGGAAGTGGTCGAGAAAGTTCGACCCTTGCTCGGCCAAGGAAAGGTTGCAGATTACATC CCCGCACTGGCCAGCGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MATNRSRRLRKKMRVDEFQELGFDMAWTFDASVSEADIDATVDKFIDEVIETRKLGFHGGGHIEWEGIIATQTIGKCTEE DIAAVKAFWANQKVSQVEVSELYDIWWG
Sequences:
>Translated_108_residues MATNRSRRLRKKMRVDEFQELGFDMAWTFDASVSEADIDATVDKFIDEVIETRKLGFHGGGHIEWEGIIATQTIGKCTEE DIAAVKAFWANQKVSQVEVSELYDIWWG >Mature_107_residues ATNRSRRLRKKMRVDEFQELGFDMAWTFDASVSEADIDATVDKFIDEVIETRKLGFHGGGHIEWEGIIATQTIGKCTEED IAAVKAFWANQKVSQVEVSELYDIWWG
Specific function: Unknown
COG id: COG3171
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0341 [H]
Homologues:
Organism=Escherichia coli, GI87082190, Length=107, Percent_Identity=58.8785046728972, Blast_Score=133, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007416 [H]
Pfam domain/function: PF04320 DUF469 [H]
EC number: NA
Molecular weight: Translated: 12372; Mature: 12241
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNRSRRLRKKMRVDEFQELGFDMAWTFDASVSEADIDATVDKFIDEVIETRKLGFHGG CCCCHHHHHHHHHCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GHIEWEGIIATQTIGKCTEEDIAAVKAFWANQKVSQVEVSELYDIWWG CEEEECEEEECHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure ATNRSRRLRKKMRVDEFQELGFDMAWTFDASVSEADIDATVDKFIDEVIETRKLGFHGG CCCHHHHHHHHHCHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GHIEWEGIIATQTIGKCTEEDIAAVKAFWANQKVSQVEVSELYDIWWG CEEEECEEEECHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 2001994 [H]