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The map label for this gene is yciH [H]

Identifier: 126175220

GI number: 126175220

Start: 3544289

End: 3544627

Strand: Direct

Name: yciH [H]

Synonym: Sbal_3018

Alternate gene names: 126175220

Gene position: 3544289-3544627 (Clockwise)

Preceding gene: 126175219

Following gene: 126175221

Centisome position: 69.12

GC content: 43.95

Gene sequence:

>339_bases
ATGAAATCTATGAAAGCAGATCCTAATGTATCCTTAGTGTACAGCACCGACAAAGGCCGTATTAATGCAGAGCCCGTCAC
TAAAGCGATTCCTGAATCCGACGGTATAGTCAGGATCCATAGAGACAGTAAGGGCCGCAAAGGCAAAGGCGTTTCGATTA
TCTCAGGCCTAGGTCTCGATGAAACCGCGTTAAAAGCAATGGCTCAAACCCTTAAAAAACAATGTGGTTGTGGTGGCACG
GTTAAAGATTTCACTATTGAGGTCCAAACCGATAACCGCGAGCAATTAAAGCTATTGCTTGAGAAGCAGAACTACAAAGT
TAAATTAGCTGGCGGTTAA

Upstream 100 bases:

>100_bases
ACCACTTAAGGATAATCCTCAAGTGGTCTTTTTTTACCTCCCAGAACCCCTGCAAATTTGATAAACTCAACGGGTATAAG
TCATCTTTTAACACCAATGA

Downstream 100 bases:

>100_bases
TCTCGCCCGACTTAGCAATATAGCAGCATGCTAGATCAACTTAGCCACATCGAACGGAGTAGTTTAATGGAGAGTTTGCA
GAACCATTTCTTAATTGCCA

Product: translation initiation factor Sui1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKSMKADPNVSLVYSTDKGRINAEPVTKAIPESDGIVRIHRDSKGRKGKGVSIISGLGLDETALKAMAQTLKKQCGCGGT
VKDFTIEVQTDNREQLKLLLEKQNYKVKLAGG

Sequences:

>Translated_112_residues
MKSMKADPNVSLVYSTDKGRINAEPVTKAIPESDGIVRIHRDSKGRKGKGVSIISGLGLDETALKAMAQTLKKQCGCGGT
VKDFTIEVQTDNREQLKLLLEKQNYKVKLAGG
>Mature_112_residues
MKSMKADPNVSLVYSTDKGRINAEPVTKAIPESDGIVRIHRDSKGRKGKGVSIISGLGLDETALKAMAQTLKKQCGCGGT
VKDFTIEVQTDNREQLKLLLEKQNYKVKLAGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=107, Percent_Identity=54.2056074766355, Blast_Score=115, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 12117; Mature: 12117

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSMKADPNVSLVYSTDKGRINAEPVTKAIPESDGIVRIHRDSKGRKGKGVSIISGLGLD
CCCCCCCCCEEEEEECCCCEECCCCCHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCC
ETALKAMAQTLKKQCGCGGTVKDFTIEVQTDNREQLKLLLEKQNYKVKLAGG
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHEEECCCCEEEEECC
>Mature Secondary Structure
MKSMKADPNVSLVYSTDKGRINAEPVTKAIPESDGIVRIHRDSKGRKGKGVSIISGLGLD
CCCCCCCCCEEEEEECCCCEECCCCCHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCC
ETALKAMAQTLKKQCGCGGTVKDFTIEVQTDNREQLKLLLEKQNYKVKLAGG
HHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2956254; 9097039; 9278503; 10497266 [H]