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The map label for this gene is ybjY [C]

Identifier: 126175175

GI number: 126175175

Start: 3489496

End: 3490602

Strand: Direct

Name: ybjY [C]

Synonym: Sbal_2973

Alternate gene names: 126175175

Gene position: 3489496-3490602 (Clockwise)

Preceding gene: 126175172

Following gene: 126175176

Centisome position: 68.06

GC content: 50.86

Gene sequence:

>1107_bases
ATGGATCGAACTGCCCGACGTTCTTGGCGCACTATCAGCGTCTGCGTGTTTGCTTTAGTCACATTATCCGCCTGTCAAAA
GGAAGTCACTGAACACGCCACGACAACCATACTGCCCACAGTCACAAGCAAAGTGTTGATCCTGACCCCAAGCTATGAGC
ACGAGCAAACCTTCACGGGGACTATCCGTGCGGGTAACACAACTGGCGTCGGCTTTGAACTTTCAGGAAAGTTAAACGAG
CTACAGGCCGATTCCGGTATCAAAGTGAAGCAAGGTCAAATACTGGCAATCCTCGATACCCGACTACTCGAAGCCGAGCG
TCAGGAAATCCAAGCGAGTCTGGCGCAAACCCAAGCCGATGTTGATTTGGCCACCAGCACTCTAAAACGTAATCAAGAAT
TGAAAAAATCGGGTTATGTCTCTGAGCAGCTATTAGATGAAAACCGCTCACAATTAAATAGCTTAGCCGCGGCGAAAAAC
CGCCTACTTGCCTCACAGCATGCCAATCAACTTAAGCTCGATAAATCCATCTTAGTGGCGCCCTTCGACGGCACCATCAG
CCGAAGACTGCATAACTTGGGCGAAGTGGTTGCTGCGGGTAGCCCCATTTTCACCTTAGTGGGCAATATCAATCCTGAAG
CCTACATTGGCGTACCTGTGGCGTTAGCGGAGCAGTTTCACGCCGAACAGCAAGTACAAGTCAGCGTGCAAGATCAAACC
TTTACCGCCGAAATCGCCGGTATCAGCGCCGAAGTGAATCCCGTCAGCCGCACCCTACAACTTAGGATCAGCCTGCCCCA
AGATGCCCGTGTGATTAACGGTGAAATTGCGTATCTGCATCAACAGCAGCAAATTGAGCAAGCTGGGTATTGGGTGCCAA
TTTCAGCGCTGACGGATGGCATTCGCGGATTATGGAATCTGTATGTCATCGCAAAGGATGAACAGCAATCCATCATAGAG
CGCCGAGATGTGGAAATCCTCTACACCACCCAAGACATGGCCTACATTCAAGGCGCGATTCAGCCCAATGAAATCTATGT
CAGCCAAGGAATCCATAAGCTGGTCGTAGGCCAAGCCGTGTCTCCTATTGCCGCAGCCACGAGGTAG

Upstream 100 bases:

>100_bases
GTTAAGCACAAAATAGACTAGACAGTCTAGTTCCGCACAACTAGACTAGCAAGTCTAGTTACATTGTATTAACGTTTAAC
TTACAGCGGAAGCACTTAAA

Downstream 100 bases:

>100_bases
TTATGATTAAAGCCTTTGTTGAAAACGGCCGCTTAGTCAGCCTCGTTATTGCACTATTACTGGTCGCGGGCTTTGGTGCT
ATCTCGAGTCTGCCGCGCAC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Efflux Transporter RND Family MFP Subunit; Secretion Protein HlyD; Membrane-Fusion Protein; RND Efflux Membrane Fusion Protein; HlyD Family Secretion Protein; Membrane Fusion Protein; RND Efflux System Membrane Fusion Protein; Multidrug RND Transporter Membrane Fusion Protein; Auxiliary Transport Protein MFP Family; Transport/Efflux Transmembrane Protein; Component Of Multidrug Efflux System; Efflux Protein; Efflux Transporter; Acriflavin Resistance Periplasmic Protein; Multidrug Efflux Transporter Protein; Cation/Multidrug Efflux System Mebrane-Fusion Component; Secretion Protein; Lipoprotein; RND Family Transporter Membrane-Fusion Protein; MFP Family Efflux Transporter; RND Membrane Fusion Protein; Protein Secretion Protein; Efflux Transporter MFP Subunit; Transmembrane Efflux Protein; Efflux System Protein; Secretion Protein HlyD Family Protein; Nodulation Protein; Efflux Transmembrane Protein; Acriflavin Resistance Protein AcrE; CzcB Subfamily Membrane Fusion Protein; Cation Efflux System; Cation Efflux Pump HlyD; AcrA/E Family Efflux Transporter MFP Subunit; HlyD Family Multidrug Efflux Protein; Membrane Efflux Protein; Secretion Protein Family Hlyd; RND Efflux Transporter; RND Superfamily Transport Protein Membrane-Fusion Protein; Efflux Transporter Rnd Family Mfp Subunit; RND Superfamily Transporter Membrane- Fusion Protein; RND/Acr Family Transmembrane Transporter

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MDRTARRSWRTISVCVFALVTLSACQKEVTEHATTTILPTVTSKVLILTPSYEHEQTFTGTIRAGNTTGVGFELSGKLNE
LQADSGIKVKQGQILAILDTRLLEAERQEIQASLAQTQADVDLATSTLKRNQELKKSGYVSEQLLDENRSQLNSLAAAKN
RLLASQHANQLKLDKSILVAPFDGTISRRLHNLGEVVAAGSPIFTLVGNINPEAYIGVPVALAEQFHAEQQVQVSVQDQT
FTAEIAGISAEVNPVSRTLQLRISLPQDARVINGEIAYLHQQQQIEQAGYWVPISALTDGIRGLWNLYVIAKDEQQSIIE
RRDVEILYTTQDMAYIQGAIQPNEIYVSQGIHKLVVGQAVSPIAAATR

Sequences:

>Translated_368_residues
MDRTARRSWRTISVCVFALVTLSACQKEVTEHATTTILPTVTSKVLILTPSYEHEQTFTGTIRAGNTTGVGFELSGKLNE
LQADSGIKVKQGQILAILDTRLLEAERQEIQASLAQTQADVDLATSTLKRNQELKKSGYVSEQLLDENRSQLNSLAAAKN
RLLASQHANQLKLDKSILVAPFDGTISRRLHNLGEVVAAGSPIFTLVGNINPEAYIGVPVALAEQFHAEQQVQVSVQDQT
FTAEIAGISAEVNPVSRTLQLRISLPQDARVINGEIAYLHQQQQIEQAGYWVPISALTDGIRGLWNLYVIAKDEQQSIIE
RRDVEILYTTQDMAYIQGAIQPNEIYVSQGIHKLVVGQAVSPIAAATR
>Mature_368_residues
MDRTARRSWRTISVCVFALVTLSACQKEVTEHATTTILPTVTSKVLILTPSYEHEQTFTGTIRAGNTTGVGFELSGKLNE
LQADSGIKVKQGQILAILDTRLLEAERQEIQASLAQTQADVDLATSTLKRNQELKKSGYVSEQLLDENRSQLNSLAAAKN
RLLASQHANQLKLDKSILVAPFDGTISRRLHNLGEVVAAGSPIFTLVGNINPEAYIGVPVALAEQFHAEQQVQVSVQDQT
FTAEIAGISAEVNPVSRTLQLRISLPQDARVINGEIAYLHQQQQIEQAGYWVPISALTDGIRGLWNLYVIAKDEQQSIIE
RRDVEILYTTQDMAYIQGAIQPNEIYVSQGIHKLVVGQAVSPIAAATR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40347; Mature: 40347

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRTARRSWRTISVCVFALVTLSACQKEVTEHATTTILPTVTSKVLILTPSYEHEQTFTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCEEEE
TIRAGNTTGVGFELSGKLNELQADSGIKVKQGQILAILDTRLLEAERQEIQASLAQTQAD
EEECCCCCCCCEEECCCHHHHCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
VDLATSTLKRNQELKKSGYVSEQLLDENRSQLNSLAAAKNRLLASQHANQLKLDKSILVA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEE
PFDGTISRRLHNLGEVVAAGSPIFTLVGNINPEAYIGVPVALAEQFHAEQQVQVSVQDQT
ECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCHHHHHHHHCCCCEEEEEEECCE
FTAEIAGISAEVNPVSRTLQLRISLPQDARVINGEIAYLHQQQQIEQAGYWVPISALTDG
EEEEEECCCCCCCCCCEEEEEEEECCCCCEEECCEEEEHHHHHHHHHCCCEEEHHHHHHH
IRGLWNLYVIAKDEQQSIIERRDVEILYTTQDMAYIQGAIQPNEIYVSQGIHKLVVGQAV
HHHHEEEEEEEECHHHHHHHHCCCEEEEEECHHHHHHCCCCCCEEEHHCCHHHHHHHHCC
SPIAAATR
CCHHHCCC
>Mature Secondary Structure
MDRTARRSWRTISVCVFALVTLSACQKEVTEHATTTILPTVTSKVLILTPSYEHEQTFTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCEEEE
TIRAGNTTGVGFELSGKLNELQADSGIKVKQGQILAILDTRLLEAERQEIQASLAQTQAD
EEECCCCCCCCEEECCCHHHHCCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
VDLATSTLKRNQELKKSGYVSEQLLDENRSQLNSLAAAKNRLLASQHANQLKLDKSILVA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEEE
PFDGTISRRLHNLGEVVAAGSPIFTLVGNINPEAYIGVPVALAEQFHAEQQVQVSVQDQT
ECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCHHHHHHHHCCCCEEEEEEECCE
FTAEIAGISAEVNPVSRTLQLRISLPQDARVINGEIAYLHQQQQIEQAGYWVPISALTDG
EEEEEECCCCCCCCCCEEEEEEEECCCCCEEECCEEEEHHHHHHHHHCCCEEEHHHHHHH
IRGLWNLYVIAKDEQQSIIERRDVEILYTTQDMAYIQGAIQPNEIYVSQGIHKLVVGQAV
HHHHEEEEEEEECHHHHHHHHCCCEEEEEECHHHHHHCCCCCCEEEHHCCHHHHHHHHCC
SPIAAATR
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA