| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175104
Identifier: 126175104
GI number: 126175104
Start: 3416324
End: 3417334
Strand: Reverse
Name: 126175104
Synonym: Sbal_2902
Alternate gene names: NA
Gene position: 3417334-3416324 (Counterclockwise)
Preceding gene: 126175105
Following gene: 126175103
Centisome position: 66.65
GC content: 44.51
Gene sequence:
>1011_bases ATGTCAAAATCGGTTGATGAAACTGTTTTTGATTTTTTCGCATTATTGCTGCAGGAAGACGACACTCCAAGTCAGGTTGT TTCCTCTCAAAGCATTGTAACAGCAGACTCAAATCAAAATGTTGCCGTTAATCAAACGGAGGCAGCATTACTTGATGCCG CAATCTTGGCTGAAAATGGTCGTACGACTGCATCACAAGCTCTAGATAGGACGATAACGCCGGCGGTACAGTTGCAGCCA AAAGCAACGTCAAGACAACATGAGTTTGTTGCTCCAGTGAGCAAGATTGCTTCTCAAGTGAACAAGCAAGCGCTAGAAAA GTTGTTGGCGCCTGTACTTAAGACTCAAACATTAGCACCGACGCCACCTCTTGTTGAAGTTACGCCTGCAGTTGATGTTC AACCCGTTGTGGTGGAAGTACCGCAAGCCAAGCCTGTTATTGATGAAGCGGTTGTTGATGAAATAATTGCTGAAAAAGTC GTTGAGCCAGTGGTTGTGCCCGAAACACAAGTCGGCATTACGCCTCCTAGCGTGACAAAAGATTTGCAAGAAGTGCTCGA TGATGAGTTTCAGGTACTATTCTTTAAAGTAGCTGGGCTGACATTGGCGGTGCCTTTGGTCAGTTTAGGCGGAATAGTTA AAATTGAGCGGATAAACCACATCTTTGGCCGACCCGCATGGTTTCTTGGTGTACAGACGCATAGGGAGGAGCAATTGAAC ATTGTTGACACTTGTGCGTGGGTTATGCCAGAAAAATACTCAGATAAACTGGCACAATCGGTAAATTATCAATATCTTGT ATTATTAGAAGGTAGTAACTGGGGATTAACTTGTGAGTCCTTGGTCAATGCGGTAAAAATTAATAAATCGCAAGTCAACT GGCGTAGTCAAGCAGGCAAGCGCCCTTGGTTAGCGGGTGTAGTGAAAGAGCAGATGTGTGGCATTTTGCACGTACAAGCC TTAGTTGAAATGCTTAATGCGGGTTTAGGTTGTCAGGACTCAATTGGTTGA
Upstream 100 bases:
>100_bases AGTTTGGCACATTTACCAGCATCGCATTATGCGAGTGGTTGTCGTGGCGTGAAAGCCTATGAAAGATTATTAGATTTCTT ATTAGTTGGGGAGTTTGGCC
Downstream 100 bases:
>100_bases GGTAAACATGAAAGATACAAGAAATGTAGCAGCAGTTGCTGCAAGTAAAGATGATGCAGTATTACAATGGGTTACCTTTA AGTTAGACCATGAAACTTAC
Product: putative CheW protein
Products: NA
Alternate protein names: CheW Domain-Containing Protein; CheW-Like Protein; CheW Domain Protein; CheW-Like Domain-Containing Protein; Chemotaxis Coupling Protein; Chemotaxis-Like Protein; Flagellar Hook-Basal Body Complex Protein FliE
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSKSVDETVFDFFALLLQEDDTPSQVVSSQSIVTADSNQNVAVNQTEAALLDAAILAENGRTTASQALDRTITPAVQLQP KATSRQHEFVAPVSKIASQVNKQALEKLLAPVLKTQTLAPTPPLVEVTPAVDVQPVVVEVPQAKPVIDEAVVDEIIAEKV VEPVVVPETQVGITPPSVTKDLQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKIERINHIFGRPAWFLGVQTHREEQLN IVDTCAWVMPEKYSDKLAQSVNYQYLVLLEGSNWGLTCESLVNAVKINKSQVNWRSQAGKRPWLAGVVKEQMCGILHVQA LVEMLNAGLGCQDSIG
Sequences:
>Translated_336_residues MSKSVDETVFDFFALLLQEDDTPSQVVSSQSIVTADSNQNVAVNQTEAALLDAAILAENGRTTASQALDRTITPAVQLQP KATSRQHEFVAPVSKIASQVNKQALEKLLAPVLKTQTLAPTPPLVEVTPAVDVQPVVVEVPQAKPVIDEAVVDEIIAEKV VEPVVVPETQVGITPPSVTKDLQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKIERINHIFGRPAWFLGVQTHREEQLN IVDTCAWVMPEKYSDKLAQSVNYQYLVLLEGSNWGLTCESLVNAVKINKSQVNWRSQAGKRPWLAGVVKEQMCGILHVQA LVEMLNAGLGCQDSIG >Mature_335_residues SKSVDETVFDFFALLLQEDDTPSQVVSSQSIVTADSNQNVAVNQTEAALLDAAILAENGRTTASQALDRTITPAVQLQPK ATSRQHEFVAPVSKIASQVNKQALEKLLAPVLKTQTLAPTPPLVEVTPAVDVQPVVVEVPQAKPVIDEAVVDEIIAEKVV EPVVVPETQVGITPPSVTKDLQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKIERINHIFGRPAWFLGVQTHREEQLNI VDTCAWVMPEKYSDKLAQSVNYQYLVLLEGSNWGLTCESLVNAVKINKSQVNWRSQAGKRPWLAGVVKEQMCGILHVQAL VEMLNAGLGCQDSIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36485; Mature: 36354
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSVDETVFDFFALLLQEDDTPSQVVSSQSIVTADSNQNVAVNQTEAALLDAAILAENG CCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCEEECHHHHHHHHHHHHHCCC RTTASQALDRTITPAVQLQPKATSRQHEFVAPVSKIASQVNKQALEKLLAPVLKTQTLAP CCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TPPLVEVTPAVDVQPVVVEVPQAKPVIDEAVVDEIIAEKVVEPVVVPETQVGITPPSVTK CCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCHHHH DLQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKIERINHIFGRPAWFLGVQTHREEQLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCEEEEECHHCCHHHCC IVDTCAWVMPEKYSDKLAQSVNYQYLVLLEGSNWGLTCESLVNAVKINKSQVNWRSQAGK HHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHCCHHHCCHHHHCCC RPWLAGVVKEQMCGILHVQALVEMLNAGLGCQDSIG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SKSVDETVFDFFALLLQEDDTPSQVVSSQSIVTADSNQNVAVNQTEAALLDAAILAENG CCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCEEECHHHHHHHHHHHHHCCC RTTASQALDRTITPAVQLQPKATSRQHEFVAPVSKIASQVNKQALEKLLAPVLKTQTLAP CCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC TPPLVEVTPAVDVQPVVVEVPQAKPVIDEAVVDEIIAEKVVEPVVVPETQVGITPPSVTK CCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCHHHH DLQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKIERINHIFGRPAWFLGVQTHREEQLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCEEEEECHHCCHHHCC IVDTCAWVMPEKYSDKLAQSVNYQYLVLLEGSNWGLTCESLVNAVKINKSQVNWRSQAGK HHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCEEHHHHHHHHHCCHHHCCHHHHCCC RPWLAGVVKEQMCGILHVQALVEMLNAGLGCQDSIG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA