| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is mlaA [H]
Identifier: 126175099
GI number: 126175099
Start: 3411824
End: 3412609
Strand: Reverse
Name: mlaA [H]
Synonym: Sbal_2897
Alternate gene names: 126175099
Gene position: 3412609-3411824 (Counterclockwise)
Preceding gene: 126175102
Following gene: 126175098
Centisome position: 66.56
GC content: 42.75
Gene sequence:
>786_bases ATGAAGTTAAAATGGATGGGATTATCTTTGGGGTTAATGCTGTTGCCTAAAGTGCAAGCGGCTGAAGTGCCCGTATCAGA TACCATTCAGCAGGAAGCACCTGCTAAGGTACAAATTACTTATGACGATCCCCGCGACCCGTTCGAAGGCTTTAACCGTG CGATGTGGGATTTTAACTATCTTTATTTAGATAGATATTTATATCGTCCTGTAGCTCATGGTTATAACGATTACATTCCT ATGCCTGCTAAAACAGGCATAAATAATTTTGTACAGAATTTAGAAGAACCTAGCAGTTTGGTAAACAACGTGCTGCAGGG GAAGTGGGGCTGGGCGGCGAATGCCGGTGGACGCTTTACTATCAACTCAACTGTAGGTCTATTAGGTGTCATTGACGTCG CAGATATGATGGGTATGAGCCGTAAGCAAGATGAGTTTAATGAAGTACTTGGTTATTATGGCGTGCCTAATGGACCATAC TTCATGGCGCCGTTTGCGGGTCCTTACGTCGTGCGAGAACTCGCGTCTGATTGGGTTGATGGTCTATACTTTCCCTTGTC TGAGTTAACAATGTGGCAAACCATTGTTAAATGGGGACTTAAAAATCTTCATTCCAGAGCGTCTGCGATCGATCAAGAAC GACTCGTTGATAATGCACTCGATCCTTATGCCTTTGTCAAAGATGCGTATTTACAACATATGGACTATAAAGTCTATGAT GGTAATGTTCCTCAAAAACAAGATGATGATGAGTTACTCGATCAGTATATGCAGGAGCTTGAGTAA
Upstream 100 bases:
>100_bases GTATGCCACTAAGACGAATTATCTTTATATCGTCATTTTTGTATTGTCACTTTAGCGAAAACTTGCTGCCTAAGCTGCAC ATTTATATTAAGAGAGCGAT
Downstream 100 bases:
>100_bases CCCTCTAGGCCGTACTTGACAGCATTTGTCGTTAGTATTCAAGTGTTAGCCTTATCGAAAAACGTTATCGGCATGTTCAC TTGAGTAATGGTTAAGCGAT
Product: VacJ family lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKLKWMGLSLGLMLLPKVQAAEVPVSDTIQQEAPAKVQITYDDPRDPFEGFNRAMWDFNYLYLDRYLYRPVAHGYNDYIP MPAKTGINNFVQNLEEPSSLVNNVLQGKWGWAANAGGRFTINSTVGLLGVIDVADMMGMSRKQDEFNEVLGYYGVPNGPY FMAPFAGPYVVRELASDWVDGLYFPLSELTMWQTIVKWGLKNLHSRASAIDQERLVDNALDPYAFVKDAYLQHMDYKVYD GNVPQKQDDDELLDQYMQELE
Sequences:
>Translated_261_residues MKLKWMGLSLGLMLLPKVQAAEVPVSDTIQQEAPAKVQITYDDPRDPFEGFNRAMWDFNYLYLDRYLYRPVAHGYNDYIP MPAKTGINNFVQNLEEPSSLVNNVLQGKWGWAANAGGRFTINSTVGLLGVIDVADMMGMSRKQDEFNEVLGYYGVPNGPY FMAPFAGPYVVRELASDWVDGLYFPLSELTMWQTIVKWGLKNLHSRASAIDQERLVDNALDPYAFVKDAYLQHMDYKVYD GNVPQKQDDDELLDQYMQELE >Mature_261_residues MKLKWMGLSLGLMLLPKVQAAEVPVSDTIQQEAPAKVQITYDDPRDPFEGFNRAMWDFNYLYLDRYLYRPVAHGYNDYIP MPAKTGINNFVQNLEEPSSLVNNVLQGKWGWAANAGGRFTINSTVGLLGVIDVADMMGMSRKQDEFNEVLGYYGVPNGPY FMAPFAGPYVVRELASDWVDGLYFPLSELTMWQTIVKWGLKNLHSRASAIDQERLVDNALDPYAFVKDAYLQHMDYKVYD GNVPQKQDDDELLDQYMQELE
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane [H]
COG id: COG2853
COG function: function code M; Surface lipoprotein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaA family [H]
Homologues:
Organism=Escherichia coli, GI1788688, Length=265, Percent_Identity=36.6037735849057, Blast_Score=162, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007428 [H]
Pfam domain/function: PF04333 VacJ [H]
EC number: NA
Molecular weight: Translated: 29822; Mature: 29822
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKWMGLSLGLMLLPKVQAAEVPVSDTIQQEAPAKVQITYDDPRDPFEGFNRAMWDFNY CCEEEECHHHHHHHHCCCHHHCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH LYLDRYLYRPVAHGYNDYIPMPAKTGINNFVQNLEEPSSLVNNVLQGKWGWAANAGGRFT HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEE INSTVGLLGVIDVADMMGMSRKQDEFNEVLGYYGVPNGPYFMAPFAGPYVVRELASDWVD ECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHH GLYFPLSELTMWQTIVKWGLKNLHSRASAIDQERLVDNALDPYAFVKDAYLQHMDYKVYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEC GNVPQKQDDDELLDQYMQELE CCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKLKWMGLSLGLMLLPKVQAAEVPVSDTIQQEAPAKVQITYDDPRDPFEGFNRAMWDFNY CCEEEECHHHHHHHHCCCHHHCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH LYLDRYLYRPVAHGYNDYIPMPAKTGINNFVQNLEEPSSLVNNVLQGKWGWAANAGGRFT HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEE INSTVGLLGVIDVADMMGMSRKQDEFNEVLGYYGVPNGPYFMAPFAGPYVVRELASDWVD ECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHH GLYFPLSELTMWQTIVKWGLKNLHSRASAIDQERLVDNALDPYAFVKDAYLQHMDYKVYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEC GNVPQKQDDDELLDQYMQELE CCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]