| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is rfbG [H]
Identifier: 126175082
GI number: 126175082
Start: 3391445
End: 3392341
Strand: Reverse
Name: rfbG [H]
Synonym: Sbal_2879
Alternate gene names: 126175082
Gene position: 3392341-3391445 (Counterclockwise)
Preceding gene: 126175083
Following gene: 126175081
Centisome position: 66.16
GC content: 34.34
Gene sequence:
>897_bases ATGATATCAAAAAAAATAGCTATTTTACTTGCGGCCTATAATGGTGGAGATTCTATATCTGATCAGATTGATACTATTTT GAGTCAAGATGTTGATAACGTTGAAGTTTATATTAGTCTAGATCTCAGTGTTGATGATTCATTTGATATATGTACCAGTT ATGTTAGGCAGCATGAGAGTTTAAAGTTACTGCTTTACGGTGAACGATTTGGTGGTGCAGGTAAAAATTTTTATCGACTA TTGAAAGATGTAGACCTTACTAAGTATGATTATATTGCCTTTAGCGATCAAGATGATATTTGGCCTGAGACTAAGCTATC TAAAGCGATAGAAAAATTACAACAATATGATTGTTATTCTGCAAATGTTACCGCGTTTTGGGAAGATGGTCGTGAGGCAT TGATAGATAAAGCTCAACCGCAACGAGAGTGGGACTTTTTATTTGAAGCTGCAGGCCCTGGTTGTACTTATGTTTTTAAG CGTGAAGTAGCCATACAATTTAAATCTTGGTTACTAGAACGTTATGATAAAATTGGTGAAGATATATCGTTGCATGACTG GCTACTTTATGCTTTTGCACGTAGTCATGGCTATCGTTGGTTTATCGATCCTGAATCCATGATGTATTATCGACAACATG CCAATAATCAAGTGGGTACTAATAACAGCTTTGCTGCAGCTAATCGACGGTTAAAATTAATCAAAAGTAAGTGGTATCGC AATCAGTCTACCAAAATTGCAGAGCATTTAGAGTTACAGCACTTGCCAGTTTTTAAATATGGCTTAAGTAAAGGTTACTT AGGTAACTTGTATTTACTTTGTCATATTATTAAAATTAGACGTAGATTACGCGACAGAGTTGCATTGTCTTTTGCATTAT TATTTAATTTATTTTAA
Upstream 100 bases:
>100_bases TGATGGTTGTATTGTTGGTGCTAATGCAGTAGTTACAAAGTCATTTCCAAACGGGGTAATTATTGCAGGAAATCCCGCTA AAATTATTAGGTTTCGTTAG
Downstream 100 bases:
>100_bases ATTTGAGGGGGCACATGATTATGTTAACCGGTGCTACTGGCTTTGTCGGTGGCGCAGTTTTAACTCAGTTAATGCAACAG CCAGACTTGGCAATTCGTAC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MISKKIAILLAAYNGGDSISDQIDTILSQDVDNVEVYISLDLSVDDSFDICTSYVRQHESLKLLLYGERFGGAGKNFYRL LKDVDLTKYDYIAFSDQDDIWPETKLSKAIEKLQQYDCYSANVTAFWEDGREALIDKAQPQREWDFLFEAAGPGCTYVFK REVAIQFKSWLLERYDKIGEDISLHDWLLYAFARSHGYRWFIDPESMMYYRQHANNQVGTNNSFAAANRRLKLIKSKWYR NQSTKIAEHLELQHLPVFKYGLSKGYLGNLYLLCHIIKIRRRLRDRVALSFALLFNLF
Sequences:
>Translated_298_residues MISKKIAILLAAYNGGDSISDQIDTILSQDVDNVEVYISLDLSVDDSFDICTSYVRQHESLKLLLYGERFGGAGKNFYRL LKDVDLTKYDYIAFSDQDDIWPETKLSKAIEKLQQYDCYSANVTAFWEDGREALIDKAQPQREWDFLFEAAGPGCTYVFK REVAIQFKSWLLERYDKIGEDISLHDWLLYAFARSHGYRWFIDPESMMYYRQHANNQVGTNNSFAAANRRLKLIKSKWYR NQSTKIAEHLELQHLPVFKYGLSKGYLGNLYLLCHIIKIRRRLRDRVALSFALLFNLF >Mature_298_residues MISKKIAILLAAYNGGDSISDQIDTILSQDVDNVEVYISLDLSVDDSFDICTSYVRQHESLKLLLYGERFGGAGKNFYRL LKDVDLTKYDYIAFSDQDDIWPETKLSKAIEKLQQYDCYSANVTAFWEDGREALIDKAQPQREWDFLFEAAGPGCTYVFK REVAIQFKSWLLERYDKIGEDISLHDWLLYAFARSHGYRWFIDPESMMYYRQHANNQVGTNNSFAAANRRLKLIKSKWYR NQSTKIAEHLELQHLPVFKYGLSKGYLGNLYLLCHIIKIRRRLRDRVALSFALLFNLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 34834; Mature: 34834
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISKKIAILLAAYNGGDSISDQIDTILSQDVDNVEVYISLDLSVDDSFDICTSYVRQHES CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCC LKLLLYGERFGGAGKNFYRLLKDVDLTKYDYIAFSDQDDIWPETKLSKAIEKLQQYDCYS EEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC ANVTAFWEDGREALIDKAQPQREWDFLFEAAGPGCTYVFKREVAIQFKSWLLERYDKIGE CCEEEEECCCHHHHHCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCC DISLHDWLLYAFARSHGYRWFIDPESMMYYRQHANNQVGTNNSFAAANRRLKLIKSKWYR CCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC NQSTKIAEHLELQHLPVFKYGLSKGYLGNLYLLCHIIKIRRRLRDRVALSFALLFNLF CCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MISKKIAILLAAYNGGDSISDQIDTILSQDVDNVEVYISLDLSVDDSFDICTSYVRQHES CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCC LKLLLYGERFGGAGKNFYRLLKDVDLTKYDYIAFSDQDDIWPETKLSKAIEKLQQYDCYS EEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC ANVTAFWEDGREALIDKAQPQREWDFLFEAAGPGCTYVFKREVAIQFKSWLLERYDKIGE CCEEEEECCCHHHHHCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCC DISLHDWLLYAFARSHGYRWFIDPESMMYYRQHANNQVGTNNSFAAANRRLKLIKSKWYR CCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC NQSTKIAEHLELQHLPVFKYGLSKGYLGNLYLLCHIIKIRRRLRDRVALSFALLFNLF CCCHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7507920; 12384590; 12704152 [H]