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The map label for this gene is ydjR [C]

Identifier: 126175074

GI number: 126175074

Start: 3380326

End: 3381033

Strand: Direct

Name: ydjR [C]

Synonym: Sbal_2870

Alternate gene names: 126175074

Gene position: 3380326-3381033 (Clockwise)

Preceding gene: 126175073

Following gene: 126175077

Centisome position: 65.93

GC content: 41.67

Gene sequence:

>708_bases
ATGACTTTAAATAAACAAGCGCAATTGATCCGCTATCAAGATTGCCCATCAACACCATGGAAAAATGGCGGTGGGAGCAC
AAAACAGCTACTTATTTCGCCCGCCACTGCCGATCTTACTGAATTCGATTATCGGATCAGCATAGCAAGCATTGGCAGTA
ACGGACCCTTTTCATTATTTAATGGCATGGACAGACAACTGGTTATCCTAGAAGGTGATGGTGTTCAACTCAGCATCGAT
AACCATGAAGGGGAAAAACAGATAAATGACCTTGGGGGAGAAGAAAGAATACTGGGAGACACAGATACAACTGAATATAA
ACGACTCACGCCTATAGACAGTGCCTTCTGCTTTGCAGGCGAAACCTCAATAACAAGTCAACTATTAGGCAATAATGTTA
TTGATTTCAATGTGATGACCAAACGCGGTGTATTTAAAGCGCATACTCAAAGGCTTAACTTTGATGGCATATTTATAGAA
GAACATGCTGCAATTACAAACAACAATAAAAGTGAGCACCATAAGACTGAAGCTGACGCAACTATCATCCAACTGCTCTG
CTGCTTAGATACAATGACATGGCAGCACAATGGCAAGATCATCAAGATCATGCCCTATGACATGCTTATTATTAGACCAG
GCGAAGATATAAAGTTAGTAACGACAACGCCAAGCCGGTTACTTAGCGTCACCATTACGGCCTGTTAA

Upstream 100 bases:

>100_bases
GCTCAAATGTACTCAGCTCAATCTCGGAAGTAATATAAGGCTCAAGGATGAGCGAACGACATTGTTATTAAGCCACAGCG
GAAAATACAGAGACGAAGGA

Downstream 100 bases:

>100_bases
CCATCAAGCAAATAAGTGGGCACAAACTTCCTCTAGTAAAGCACAAGTTCATTGTTCGACCCCAAGATTGCTCTGCTCAT
TAGTGTCACCACTATCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MTLNKQAQLIRYQDCPSTPWKNGGGSTKQLLISPATADLTEFDYRISIASIGSNGPFSLFNGMDRQLVILEGDGVQLSID
NHEGEKQINDLGGEERILGDTDTTEYKRLTPIDSAFCFAGETSITSQLLGNNVIDFNVMTKRGVFKAHTQRLNFDGIFIE
EHAAITNNNKSEHHKTEADATIIQLLCCLDTMTWQHNGKIIKIMPYDMLIIRPGEDIKLVTTTPSRLLSVTITAC

Sequences:

>Translated_235_residues
MTLNKQAQLIRYQDCPSTPWKNGGGSTKQLLISPATADLTEFDYRISIASIGSNGPFSLFNGMDRQLVILEGDGVQLSID
NHEGEKQINDLGGEERILGDTDTTEYKRLTPIDSAFCFAGETSITSQLLGNNVIDFNVMTKRGVFKAHTQRLNFDGIFIE
EHAAITNNNKSEHHKTEADATIIQLLCCLDTMTWQHNGKIIKIMPYDMLIIRPGEDIKLVTTTPSRLLSVTITAC
>Mature_234_residues
TLNKQAQLIRYQDCPSTPWKNGGGSTKQLLISPATADLTEFDYRISIASIGSNGPFSLFNGMDRQLVILEGDGVQLSIDN
HEGEKQINDLGGEERILGDTDTTEYKRLTPIDSAFCFAGETSITSQLLGNNVIDFNVMTKRGVFKAHTQRLNFDGIFIEE
HAAITNNNKSEHHKTEADATIIQLLCCLDTMTWQHNGKIIKIMPYDMLIIRPGEDIKLVTTTPSRLLSVTITAC

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 26065; Mature: 25934

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNKQAQLIRYQDCPSTPWKNGGGSTKQLLISPATADLTEFDYRISIASIGSNGPFSLF
CCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEECEEEEEEEEECCCCCCHHH
NGMDRQLVILEGDGVQLSIDNHEGEKQINDLGGEERILGDTDTTEYKRLTPIDSAFCFAG
CCCCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCEEECCCCCCCEEECCCCCCEEEECC
ETSITSQLLGNNVIDFNVMTKRGVFKAHTQRLNFDGIFIEEHAAITNNNKSEHHKTEADA
CHHHHHHHHCCCEEEEEEECCCCEEEHHHHEECCCEEEEECCEEECCCCCCHHHCCHHHH
TIIQLLCCLDTMTWQHNGKIIKIMPYDMLIIRPGEDIKLVTTTPSRLLSVTITAC
HHHHHHHHHHHCEEECCCEEEEEECCEEEEEECCCCEEEEEECCCCEEEEEEEEC
>Mature Secondary Structure 
TLNKQAQLIRYQDCPSTPWKNGGGSTKQLLISPATADLTEFDYRISIASIGSNGPFSLF
CCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEECEEEEEEEEECCCCCCHHH
NGMDRQLVILEGDGVQLSIDNHEGEKQINDLGGEERILGDTDTTEYKRLTPIDSAFCFAG
CCCCCEEEEEECCCEEEEECCCCCHHHHHHCCCCCEEECCCCCCCEEECCCCCCEEEECC
ETSITSQLLGNNVIDFNVMTKRGVFKAHTQRLNFDGIFIEEHAAITNNNKSEHHKTEADA
CHHHHHHHHCCCEEEEEEECCCCEEEHHHHEECCCEEEEECCEEECCCCCCHHHCCHHHH
TIIQLLCCLDTMTWQHNGKIIKIMPYDMLIIRPGEDIKLVTTTPSRLLSVTITAC
HHHHHHHHHHHCEEECCCEEEEEECCEEEEEECCCCEEEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]