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The map label for this gene is gfcB [H]

Identifier: 126175065

GI number: 126175065

Start: 3369784

End: 3370491

Strand: Direct

Name: gfcB [H]

Synonym: Sbal_2861

Alternate gene names: 126175065

Gene position: 3369784-3370491 (Clockwise)

Preceding gene: 126175064

Following gene: 126175066

Centisome position: 65.72

GC content: 41.38

Gene sequence:

>708_bases
ATGCGTATAAATAAAAAACTACTCTTACTCACAGCCTCAATTGCAGTAATGGGTATTGCTGGCTGTAGTCAACGAATTAG
CGCCCTCAACGATACGATGAAATTGGCTTTTATTGAAGAGAGCGATATTAAGCTCACCACCGAGCAAATAAAAGCCAATC
CCTACGCCAGCATCTATGTCAAGATAGAAGATATACCTCAAGCATTTGTTGTTTTAGCCTTTGCAGAACCGAAACAAACC
CTCACCACTGTCAGGCCAGCGCCAGAAGCAATGGAGCTAAAATGGCTCTCTGCAGATAAAGCAATGTTAGTGACAGTGAA
CGGGCGTTTGGTGAGAACTCATAGTCTGCTCTCAGGCAATTTAGCCGCTATTGAAAGTTCAGAACCCGATCCTATTCTCC
TAGGTCTGCATCTAAATAGTACGCCTAAGACTTGGACTCGCACGCTTGACTGGCAGCCCGGCTACCATTATGGATATAAA
CTTAATTCACAGTTTGATTTTATCGCTGAGGAAAAGATACTCATAAATGATACTCCCACTCAAGCATTGCATTACAGCGA
GTTAGTATCTGTTGAAGGTCTTAATATTAAATATTTAAATGAGTTTTGGTTAAAACCGGATAATGGGCACGTCATTAAAA
GCCGCCAGAAGATAGCACCCAATCTGCCTTTTATCGATATAACTTTACTTAAGCCATTTGCATCTTAG

Upstream 100 bases:

>100_bases
TTTGCTCGTTTAGAGAAAGTGAGAATCACTTCATTTATTGAAATAAGTCTCAGATATCTCTACATTAGATATTTATTACT
ATTGAGAATAAGCAACTCGG

Downstream 100 bases:

>100_bases
TGGAACCATTATGAGATATTACATCGCGCCATTGGCACTTGTACTTAGTTCAGCACTAACGGCAACCGTTCATGCTGAAA
CCCAGTTATTCATCAGTACA

Product: putative lipoprotein

Products: NA

Alternate protein names: Group 4 capsule protein B homolog [H]

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRINKKLLLLTASIAVMGIAGCSQRISALNDTMKLAFIEESDIKLTTEQIKANPYASIYVKIEDIPQAFVVLAFAEPKQT
LTTVRPAPEAMELKWLSADKAMLVTVNGRLVRTHSLLSGNLAAIESSEPDPILLGLHLNSTPKTWTRTLDWQPGYHYGYK
LNSQFDFIAEEKILINDTPTQALHYSELVSVEGLNIKYLNEFWLKPDNGHVIKSRQKIAPNLPFIDITLLKPFAS

Sequences:

>Translated_235_residues
MRINKKLLLLTASIAVMGIAGCSQRISALNDTMKLAFIEESDIKLTTEQIKANPYASIYVKIEDIPQAFVVLAFAEPKQT
LTTVRPAPEAMELKWLSADKAMLVTVNGRLVRTHSLLSGNLAAIESSEPDPILLGLHLNSTPKTWTRTLDWQPGYHYGYK
LNSQFDFIAEEKILINDTPTQALHYSELVSVEGLNIKYLNEFWLKPDNGHVIKSRQKIAPNLPFIDITLLKPFAS
>Mature_235_residues
MRINKKLLLLTASIAVMGIAGCSQRISALNDTMKLAFIEESDIKLTTEQIKANPYASIYVKIEDIPQAFVVLAFAEPKQT
LTTVRPAPEAMELKWLSADKAMLVTVNGRLVRTHSLLSGNLAAIESSEPDPILLGLHLNSTPKTWTRTLDWQPGYHYGYK
LNSQFDFIAEEKILINDTPTQALHYSELVSVEGLNIKYLNEFWLKPDNGHVIKSRQKIAPNLPFIDITLLKPFAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjbF [H]

Homologues:

Organism=Escherichia coli, GI1787221, Length=224, Percent_Identity=30.8035714285714, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI87082360, Length=217, Percent_Identity=29.0322580645161, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021308 [H]

Pfam domain/function: PF11102 DUF2886 [H]

EC number: NA

Molecular weight: Translated: 26320; Mature: 26320

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRINKKLLLLTASIAVMGIAGCSQRISALNDTMKLAFIEESDIKLTTEQIKANPYASIYV
CCCCCEEEEEEEHHHEEECCCHHHHHHHHCCEEEEEEEECCCCEEEHHHHCCCCEEEEEE
KIEDIPQAFVVLAFAEPKQTLTTVRPAPEAMELKWLSADKAMLVTVNGRLVRTHSLLSGN
EEECCCCEEEEEEECCCCHHEEECCCCCCCEEEEEECCCCEEEEEECCEEEEEEEECCCC
LAAIESSEPDPILLGLHLNSTPKTWTRTLDWQPGYHYGYKLNSQFDFIAEEKILINDTPT
EEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCEECEEECCCCCEEECCEEEEECCCC
QALHYSELVSVEGLNIKYLNEFWLKPDNGHVIKSRQKIAPNLPFIDITLLKPFAS
HHEEHHHHEEECCCCEEEEEEEEECCCCCCEEECCHHCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MRINKKLLLLTASIAVMGIAGCSQRISALNDTMKLAFIEESDIKLTTEQIKANPYASIYV
CCCCCEEEEEEEHHHEEECCCHHHHHHHHCCEEEEEEEECCCCEEEHHHHCCCCEEEEEE
KIEDIPQAFVVLAFAEPKQTLTTVRPAPEAMELKWLSADKAMLVTVNGRLVRTHSLLSGN
EEECCCCEEEEEEECCCCHHEEECCCCCCCEEEEEECCCCEEEEEECCEEEEEEEECCCC
LAAIESSEPDPILLGLHLNSTPKTWTRTLDWQPGYHYGYKLNSQFDFIAEEKILINDTPT
EEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCEECEEECCCCCEEECCEEEEECCCC
QALHYSELVSVEGLNIKYLNEFWLKPDNGHVIKSRQKIAPNLPFIDITLLKPFAS
HHEEHHHHEEECCCCEEEEEEEEECCCCCCEEECCHHCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]