| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175054
Identifier: 126175054
GI number: 126175054
Start: 3356525
End: 3357229
Strand: Direct
Name: 126175054
Synonym: Sbal_2849
Alternate gene names: NA
Gene position: 3356525-3357229 (Clockwise)
Preceding gene: 126175053
Following gene: 126175055
Centisome position: 65.46
GC content: 41.84
Gene sequence:
>705_bases ATGCAGATAAACAATAAGATAATTATAAGCTGCAGCATAATCGCTAGCTTAGTCTCACAGACCACATATGCCCAAATCAA TACAGGGACAACCTCCAATAAACTCACGGCTTTTATCCATGCTGAATTAATCATTGCGCCGGGTAAGCGTTTAAGTGATG CCACTTTATTGGTTGGAAATAATCGAATTAAAGCCATTATTGAGCACGGTGACATTCCCGCTGGCGCATTTAAAATCGAT TTGAGTGGTTATACTATTTACCCTGGATTTATCGATCCTTTCACCGATTATGGGATTGAGTTCGAATATCCAAAACTTGG GCTCACTCGTCCTGTCTATGGTATTAAACGTATCGGTGGCAATGCAGACAATGGTGCAATTCATTCTGAAAAAGAATGGT TTAATTACGTTTACCCCAATAAAGAACGCGCTAAAGAGTGGATCAATAATGGCTTTACGAGTGTGCAAAGTAGCAAACTC GACGGAATCTTCCGAGGGACGGGTGTCAGCCTGTCATTAGCAGACAAAACCGCCAACGAAGTGATTTATCGTGCCCGCAG TCAACCTTTTATGGCATTCGATAAAGGCTCATCTGAACAAGATTATCCGTCATCATTAATGGGCAGTATTGCACTTATTA GACCCAGAATTCAGATAATAAGTGCAACGCTCGGTCAAAATGGTGAGGAGGGAGTTAGCTGCTGA
Upstream 100 bases:
>100_bases CCACGCCTCATTCCCGCTCAAATTGCGTTACAATTCAACCTTAGTATTTACATCTGCTTTCAGTTACTCTTTATTCACCC TCACTCGATTGAATAAAATA
Downstream 100 bases:
>100_bases TAAGCTACCCCTCTTCCGACCAAAGATGAGCGAGTAACCATGAACTACCAGCAGCTAACTGAGGGGCAACGATACCAGAT TGCCCTGCTTTATAAAGAGA
Product: amidohydrolase
Products: NA
Alternate protein names: Metal-Dependent Hydrolase Superfamily Protein; Amidohydrolase-Like Domain-Containing Protein; Secreted; Amidohydrolase Family Protein
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MQINNKIIISCSIIASLVSQTTYAQINTGTTSNKLTAFIHAELIIAPGKRLSDATLLVGNNRIKAIIEHGDIPAGAFKID LSGYTIYPGFIDPFTDYGIEFEYPKLGLTRPVYGIKRIGGNADNGAIHSEKEWFNYVYPNKERAKEWINNGFTSVQSSKL DGIFRGTGVSLSLADKTANEVIYRARSQPFMAFDKGSSEQDYPSSLMGSIALIRPRIQIISATLGQNGEEGVSC
Sequences:
>Translated_234_residues MQINNKIIISCSIIASLVSQTTYAQINTGTTSNKLTAFIHAELIIAPGKRLSDATLLVGNNRIKAIIEHGDIPAGAFKID LSGYTIYPGFIDPFTDYGIEFEYPKLGLTRPVYGIKRIGGNADNGAIHSEKEWFNYVYPNKERAKEWINNGFTSVQSSKL DGIFRGTGVSLSLADKTANEVIYRARSQPFMAFDKGSSEQDYPSSLMGSIALIRPRIQIISATLGQNGEEGVSC >Mature_234_residues MQINNKIIISCSIIASLVSQTTYAQINTGTTSNKLTAFIHAELIIAPGKRLSDATLLVGNNRIKAIIEHGDIPAGAFKID LSGYTIYPGFIDPFTDYGIEFEYPKLGLTRPVYGIKRIGGNADNGAIHSEKEWFNYVYPNKERAKEWINNGFTSVQSSKL DGIFRGTGVSLSLADKTANEVIYRARSQPFMAFDKGSSEQDYPSSLMGSIALIRPRIQIISATLGQNGEEGVSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25578; Mature: 25578
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQINNKIIISCSIIASLVSQTTYAQINTGTTSNKLTAFIHAELIIAPGKRLSDATLLVGN CCCCCEEEEEHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEC NRIKAIIEHGDIPAGAFKIDLSGYTIYPGFIDPFTDYGIEFEYPKLGLTRPVYGIKRIGG CEEEEEEECCCCCCCEEEEEECCEEECCCCCCCHHHCCCEEECCCCCCCCCCHHHHHCCC NADNGAIHSEKEWFNYVYPNKERAKEWINNGFTSVQSSKLDGIFRGTGVSLSLADKTANE CCCCCCCCCCHHHHEECCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECCHHHHH VIYRARSQPFMAFDKGSSEQDYPSSLMGSIALIRPRIQIISATLGQNGEEGVSC HHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCHHEEEEHHHCCCCCCCCCC >Mature Secondary Structure MQINNKIIISCSIIASLVSQTTYAQINTGTTSNKLTAFIHAELIIAPGKRLSDATLLVGN CCCCCEEEEEHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEC NRIKAIIEHGDIPAGAFKIDLSGYTIYPGFIDPFTDYGIEFEYPKLGLTRPVYGIKRIGG CEEEEEEECCCCCCCEEEEEECCEEECCCCCCCHHHCCCEEECCCCCCCCCCHHHHHCCC NADNGAIHSEKEWFNYVYPNKERAKEWINNGFTSVQSSKLDGIFRGTGVSLSLADKTANE CCCCCCCCCCHHHHEECCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEEECCHHHHH VIYRARSQPFMAFDKGSSEQDYPSSLMGSIALIRPRIQIISATLGQNGEEGVSC HHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCHHEEEEHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA