Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is dcp [H]

Identifier: 126175049

GI number: 126175049

Start: 3349690

End: 3351840

Strand: Direct

Name: dcp [H]

Synonym: Sbal_2844

Alternate gene names: 126175049

Gene position: 3349690-3351840 (Clockwise)

Preceding gene: 126175048

Following gene: 126175053

Centisome position: 65.33

GC content: 50.35

Gene sequence:

>2151_bases
ATGCGTAAACGATTTATTGCCATCGCCATCGGCGCCACACTCACCGCCGGATTTATGGCAGGTTGTAGCAACACAGAAAG
CAAAGCCCCTAACGCCATGTCGGTACAAGCCCAAAACCCCTTGTTTCAAGTCAGTAATCTGCAATATCAAGCGCCCGACT
TTAGCCTCATCAAGAATGAGCACTTTACGCCTGCCCTAGAGCAAGGCATGGCCGAGCACTATCAAGAAATCCTCGCGATT
GCGAATAATCCCGCAGCGGCGACCTTCAATAACACGATTGTGGCTATGGAGAAAAGTGGCGCCCTGCTCAGCCGTGCATC
GAGTGTGTTTTATAATTTAGCGGGTTCGAACAGCAATCCAGAGCTGCGTAAAATTCAAGGTGAAATGGCGCCAAAAATGG
CGGCGCACTCGGACAACATCAACTTAAACCCAGCGCTATTTGCCCGTATCGAAGCCATTTATAACGACCGCGCTAATCTA
GGTTTAACCCCAGAAGCTGTGCGTTTGGTTGAGGTCTATCACCAACGCTTTATCATGGCGGGCGCAAAACTCACCGACGA
ACAGAAAGTGAAAATCCGCGCATTAAATGAAGAACAATCGACACTGACCAATGAGTTTTCCCAGCGTTTACTGCGCCTAA
CTAAAGAAATCGCCGTTATCGTGGAATCAAAGAATGAGCTTGCTGGATTAACTGACAGCGACATCACTTCGGCCGCAAAC
GATGCTAAAGCTGCGGGTCACGATGGCAAGTATCTGATCAATATCACCAACACCACTCGTCAGCCCGTATTGGCCTCACT
GGAAAACCGTGAACTGCGCCAACGCATCTGGGAAGCCTCAGCTAACCGTGGCTTAAGTGGTGAAAACGAGACGGCGTCAC
TGGTATCTCGTTTAGCGCAACTGCGTGCTGAGCGCGCCACCCTATTAGGTTATGAAAACTGGGCGAGTTATCGCCTAGCG
CCACAAATGGCCAAAACGCCAGAAGCGGTTTACAGCATGTTTGGCTCTATGGTGCCAGCCGTAGTCGCAAATACAGAGAA
AGAAGCGGCTGACATTCAAGCCATGATCACTAAAACCGGTGGTGATTTTGAACTGGCGCCGTGGGACTGGGAATTCTACG
CAGAGAAAGTCCGCCAAGAAAAATACGCCCTCGATGGCAATAGCATTCGCCCATACTTTGAGTTTAACCGCGTCCTCGAA
GATGGCGTGTTCTACACACTCAAAGAACTCTATGGCGTCACCCTAAAACCTCGCCCAGATTTACCGGTTTATCATCCCGA
TGTGAAAGCCTACGAAATGTTTGATGCCGACGGTTCAAGCATGGCTATTTTCTACGCCGACTATTTTGCCCGTGAAGGCA
AACGCGGCGGCGCTTGGATGAGTTCGTTCGTCGGTCAATCCTTCCTCGAAGGTACTAAACCTGTGGTCGTCAACGTGATG
AACATTAAGAAAGCGCCAGAGGGTGAACCTACATTCGTCAGCTATAACGAAGTCACCACTATGTTCCATGAAATGGGCCA
CGGCACCCACGGCATGTTCTCCAAAGTGACATATCCAAGTCTGGCGGGCACTTCGGTTTCACGGGACTTTGTCGAATTCC
CATCGACCTTCGAAGAGGATTGGGCGGCCCATCCAAAAGTGTTGGCCAACTACGCGAAACACTATGAAACCGGCAAACCC
ATTCCCGACGAACTGCTGCAAAAACTGCTGAAATCTGGCAGCTTTAACCAAGGATTCGACACACTGGAATACATGGCCGC
CGCATTAGTGGATATGGAGTGGCATTCATTAAGCCCAGATATGCCGCTACAAGATGTGGCCACCTTTGAAGCCAATGCCC
TGAAAAAGCACGGCTTAAACATCAGCGCCGTGCCGCCACGCTATAAGTCGACCTACTTTGCCCACGCCTTCCCCGGTGGT
TACTCGGCAAGTTATTACGCGTATATGTGGAGTGAGATTTTAGCGGCGGATGCCTTTGCCTATGTGCAAACCCAAGGCGG
GCTCAATCGTGAAATCGGCATGAAGTACCGCAAAACAATCAGAGAAGTGGGTAATAGCATAGCGCCAATGGAAGCCTACA
AAAACTTCCGTGGACAAGAGCCAACCACACAAGGATTGCTTAAACGCCGCGGGCTAGACCAAACACTCTAA

Upstream 100 bases:

>100_bases
TTATTTAGATACAGCCCCATAACAAGCCATTTTCAGTCCCATTTAAGTTACTAACGTTACAGTCCTAAAAAAACAACAAT
TCAAAGGAAGTCACTCAATT

Downstream 100 bases:

>100_bases
GCTACAAAAAACCTAAGCAACAAGCACTTTAAACTGAGTATTGATAGCCTTAATGCAATTAAGTTAGAGATAGAGCGTTA
ACCAAAAAAATCAGCCAGCA

Product: peptidyl-dipeptidase Dcp

Products: NA

Alternate protein names: Dipeptidyl carboxypeptidase [H]

Number of amino acids: Translated: 716; Mature: 716

Protein sequence:

>716_residues
MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSNLQYQAPDFSLIKNEHFTPALEQGMAEHYQEILAI
ANNPAAATFNNTIVAMEKSGALLSRASSVFYNLAGSNSNPELRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRANL
GLTPEAVRLVEVYHQRFIMAGAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVIVESKNELAGLTDSDITSAAN
DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLSGENETASLVSRLAQLRAERATLLGYENWASYRLA
PQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMITKTGGDFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLE
DGVFYTLKELYGVTLKPRPDLPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM
NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEEDWAAHPKVLANYAKHYETGKP
IPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPDMPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGG
YSASYYAYMWSEILAADAFAYVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQTL

Sequences:

>Translated_716_residues
MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSNLQYQAPDFSLIKNEHFTPALEQGMAEHYQEILAI
ANNPAAATFNNTIVAMEKSGALLSRASSVFYNLAGSNSNPELRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRANL
GLTPEAVRLVEVYHQRFIMAGAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVIVESKNELAGLTDSDITSAAN
DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLSGENETASLVSRLAQLRAERATLLGYENWASYRLA
PQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMITKTGGDFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLE
DGVFYTLKELYGVTLKPRPDLPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM
NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEEDWAAHPKVLANYAKHYETGKP
IPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPDMPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGG
YSASYYAYMWSEILAADAFAYVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQTL
>Mature_716_residues
MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSNLQYQAPDFSLIKNEHFTPALEQGMAEHYQEILAI
ANNPAAATFNNTIVAMEKSGALLSRASSVFYNLAGSNSNPELRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRANL
GLTPEAVRLVEVYHQRFIMAGAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVIVESKNELAGLTDSDITSAAN
DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLSGENETASLVSRLAQLRAERATLLGYENWASYRLA
PQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMITKTGGDFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLE
DGVFYTLKELYGVTLKPRPDLPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM
NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEEDWAAHPKVLANYAKHYETGKP
IPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPDMPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGG
YSASYYAYMWSEILAADAFAYVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQTL

Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]

COG id: COG0339

COG function: function code E; Zn-dependent oligopeptidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3 family [H]

Homologues:

Organism=Homo sapiens, GI4507491, Length=607, Percent_Identity=28.33607907743, Blast_Score=233, Evalue=4e-61,
Organism=Homo sapiens, GI14149738, Length=608, Percent_Identity=28.7828947368421, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI156105687, Length=608, Percent_Identity=22.6973684210526, Blast_Score=158, Evalue=1e-38,
Organism=Escherichia coli, GI1787819, Length=676, Percent_Identity=45.7100591715976, Blast_Score=646, Evalue=0.0,
Organism=Escherichia coli, GI1789913, Length=685, Percent_Identity=31.5328467153285, Blast_Score=351, Evalue=1e-97,
Organism=Caenorhabditis elegans, GI32565901, Length=636, Percent_Identity=21.6981132075472, Blast_Score=81, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6319793, Length=689, Percent_Identity=26.2699564586357, Blast_Score=194, Evalue=5e-50,
Organism=Saccharomyces cerevisiae, GI6322715, Length=476, Percent_Identity=25.2100840336134, Blast_Score=134, Evalue=5e-32,
Organism=Drosophila melanogaster, GI21356111, Length=477, Percent_Identity=23.2704402515723, Blast_Score=164, Evalue=3e-40,
Organism=Drosophila melanogaster, GI20129717, Length=406, Percent_Identity=25.8620689655172, Blast_Score=144, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567 [H]

Pfam domain/function: PF01432 Peptidase_M3 [H]

EC number: =3.4.15.5 [H]

Molecular weight: Translated: 79622; Mature: 79622

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSNLQYQAPDFSLIKNE
CCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCEECCCCHHHHCCC
HFTPALEQGMAEHYQEILAIANNPAAATFNNTIVAMEKSGALLSRASSVFYNLAGSNSNP
CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCHHHHHHHHHHEEECCCCCCC
ELRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRANLGLTPEAVRLVEVYHQRFIMA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
GAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVIVESKNELAGLTDSDITSAAN
CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCHHHHCCC
DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLSGENETASLVSRLAQ
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LRAERATLLGYENWASYRLAPQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMITKTG
HHHHHHHHCCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCC
GDFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLEDGVFYTLKELYGVTLKPRPD
CCEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM
CCCCCCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEED
ECCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCHHHHH
WAAHPKVLANYAKHYETGKPIPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPD
HCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCC
MPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGGYSASYYAYMWSEILAADAFA
CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
YVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQTL
EEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSNLQYQAPDFSLIKNE
CCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCEECCCCHHHHCCC
HFTPALEQGMAEHYQEILAIANNPAAATFNNTIVAMEKSGALLSRASSVFYNLAGSNSNP
CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCHHHHHHHHHHEEECCCCCCC
ELRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRANLGLTPEAVRLVEVYHQRFIMA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
GAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVIVESKNELAGLTDSDITSAAN
CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCHHHHCCC
DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLSGENETASLVSRLAQ
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LRAERATLLGYENWASYRLAPQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMITKTG
HHHHHHHHCCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCC
GDFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLEDGVFYTLKELYGVTLKPRPD
CCEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM
CCCCCCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEED
ECCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCHHHHH
WAAHPKVLANYAKHYETGKPIPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPD
HCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCC
MPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGGYSASYYAYMWSEILAADAFA
CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
YVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQTL
EEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8226676; 9097039; 9278503 [H]