| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is dcp [H]
Identifier: 126175049
GI number: 126175049
Start: 3349690
End: 3351840
Strand: Direct
Name: dcp [H]
Synonym: Sbal_2844
Alternate gene names: 126175049
Gene position: 3349690-3351840 (Clockwise)
Preceding gene: 126175048
Following gene: 126175053
Centisome position: 65.33
GC content: 50.35
Gene sequence:
>2151_bases ATGCGTAAACGATTTATTGCCATCGCCATCGGCGCCACACTCACCGCCGGATTTATGGCAGGTTGTAGCAACACAGAAAG CAAAGCCCCTAACGCCATGTCGGTACAAGCCCAAAACCCCTTGTTTCAAGTCAGTAATCTGCAATATCAAGCGCCCGACT TTAGCCTCATCAAGAATGAGCACTTTACGCCTGCCCTAGAGCAAGGCATGGCCGAGCACTATCAAGAAATCCTCGCGATT GCGAATAATCCCGCAGCGGCGACCTTCAATAACACGATTGTGGCTATGGAGAAAAGTGGCGCCCTGCTCAGCCGTGCATC GAGTGTGTTTTATAATTTAGCGGGTTCGAACAGCAATCCAGAGCTGCGTAAAATTCAAGGTGAAATGGCGCCAAAAATGG CGGCGCACTCGGACAACATCAACTTAAACCCAGCGCTATTTGCCCGTATCGAAGCCATTTATAACGACCGCGCTAATCTA GGTTTAACCCCAGAAGCTGTGCGTTTGGTTGAGGTCTATCACCAACGCTTTATCATGGCGGGCGCAAAACTCACCGACGA ACAGAAAGTGAAAATCCGCGCATTAAATGAAGAACAATCGACACTGACCAATGAGTTTTCCCAGCGTTTACTGCGCCTAA CTAAAGAAATCGCCGTTATCGTGGAATCAAAGAATGAGCTTGCTGGATTAACTGACAGCGACATCACTTCGGCCGCAAAC GATGCTAAAGCTGCGGGTCACGATGGCAAGTATCTGATCAATATCACCAACACCACTCGTCAGCCCGTATTGGCCTCACT GGAAAACCGTGAACTGCGCCAACGCATCTGGGAAGCCTCAGCTAACCGTGGCTTAAGTGGTGAAAACGAGACGGCGTCAC TGGTATCTCGTTTAGCGCAACTGCGTGCTGAGCGCGCCACCCTATTAGGTTATGAAAACTGGGCGAGTTATCGCCTAGCG CCACAAATGGCCAAAACGCCAGAAGCGGTTTACAGCATGTTTGGCTCTATGGTGCCAGCCGTAGTCGCAAATACAGAGAA AGAAGCGGCTGACATTCAAGCCATGATCACTAAAACCGGTGGTGATTTTGAACTGGCGCCGTGGGACTGGGAATTCTACG CAGAGAAAGTCCGCCAAGAAAAATACGCCCTCGATGGCAATAGCATTCGCCCATACTTTGAGTTTAACCGCGTCCTCGAA GATGGCGTGTTCTACACACTCAAAGAACTCTATGGCGTCACCCTAAAACCTCGCCCAGATTTACCGGTTTATCATCCCGA TGTGAAAGCCTACGAAATGTTTGATGCCGACGGTTCAAGCATGGCTATTTTCTACGCCGACTATTTTGCCCGTGAAGGCA AACGCGGCGGCGCTTGGATGAGTTCGTTCGTCGGTCAATCCTTCCTCGAAGGTACTAAACCTGTGGTCGTCAACGTGATG AACATTAAGAAAGCGCCAGAGGGTGAACCTACATTCGTCAGCTATAACGAAGTCACCACTATGTTCCATGAAATGGGCCA CGGCACCCACGGCATGTTCTCCAAAGTGACATATCCAAGTCTGGCGGGCACTTCGGTTTCACGGGACTTTGTCGAATTCC CATCGACCTTCGAAGAGGATTGGGCGGCCCATCCAAAAGTGTTGGCCAACTACGCGAAACACTATGAAACCGGCAAACCC ATTCCCGACGAACTGCTGCAAAAACTGCTGAAATCTGGCAGCTTTAACCAAGGATTCGACACACTGGAATACATGGCCGC CGCATTAGTGGATATGGAGTGGCATTCATTAAGCCCAGATATGCCGCTACAAGATGTGGCCACCTTTGAAGCCAATGCCC TGAAAAAGCACGGCTTAAACATCAGCGCCGTGCCGCCACGCTATAAGTCGACCTACTTTGCCCACGCCTTCCCCGGTGGT TACTCGGCAAGTTATTACGCGTATATGTGGAGTGAGATTTTAGCGGCGGATGCCTTTGCCTATGTGCAAACCCAAGGCGG GCTCAATCGTGAAATCGGCATGAAGTACCGCAAAACAATCAGAGAAGTGGGTAATAGCATAGCGCCAATGGAAGCCTACA AAAACTTCCGTGGACAAGAGCCAACCACACAAGGATTGCTTAAACGCCGCGGGCTAGACCAAACACTCTAA
Upstream 100 bases:
>100_bases TTATTTAGATACAGCCCCATAACAAGCCATTTTCAGTCCCATTTAAGTTACTAACGTTACAGTCCTAAAAAAACAACAAT TCAAAGGAAGTCACTCAATT
Downstream 100 bases:
>100_bases GCTACAAAAAACCTAAGCAACAAGCACTTTAAACTGAGTATTGATAGCCTTAATGCAATTAAGTTAGAGATAGAGCGTTA ACCAAAAAAATCAGCCAGCA
Product: peptidyl-dipeptidase Dcp
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSNLQYQAPDFSLIKNEHFTPALEQGMAEHYQEILAI ANNPAAATFNNTIVAMEKSGALLSRASSVFYNLAGSNSNPELRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRANL GLTPEAVRLVEVYHQRFIMAGAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVIVESKNELAGLTDSDITSAAN DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLSGENETASLVSRLAQLRAERATLLGYENWASYRLA PQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMITKTGGDFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLE DGVFYTLKELYGVTLKPRPDLPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEEDWAAHPKVLANYAKHYETGKP IPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPDMPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGG YSASYYAYMWSEILAADAFAYVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQTL
Sequences:
>Translated_716_residues MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSNLQYQAPDFSLIKNEHFTPALEQGMAEHYQEILAI ANNPAAATFNNTIVAMEKSGALLSRASSVFYNLAGSNSNPELRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRANL GLTPEAVRLVEVYHQRFIMAGAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVIVESKNELAGLTDSDITSAAN DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLSGENETASLVSRLAQLRAERATLLGYENWASYRLA PQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMITKTGGDFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLE DGVFYTLKELYGVTLKPRPDLPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEEDWAAHPKVLANYAKHYETGKP IPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPDMPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGG YSASYYAYMWSEILAADAFAYVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQTL >Mature_716_residues MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSNLQYQAPDFSLIKNEHFTPALEQGMAEHYQEILAI ANNPAAATFNNTIVAMEKSGALLSRASSVFYNLAGSNSNPELRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRANL GLTPEAVRLVEVYHQRFIMAGAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVIVESKNELAGLTDSDITSAAN DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLSGENETASLVSRLAQLRAERATLLGYENWASYRLA PQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMITKTGGDFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLE DGVFYTLKELYGVTLKPRPDLPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEEDWAAHPKVLANYAKHYETGKP IPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPDMPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGG YSASYYAYMWSEILAADAFAYVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQTL
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=607, Percent_Identity=28.33607907743, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI14149738, Length=608, Percent_Identity=28.7828947368421, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI156105687, Length=608, Percent_Identity=22.6973684210526, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1787819, Length=676, Percent_Identity=45.7100591715976, Blast_Score=646, Evalue=0.0, Organism=Escherichia coli, GI1789913, Length=685, Percent_Identity=31.5328467153285, Blast_Score=351, Evalue=1e-97, Organism=Caenorhabditis elegans, GI32565901, Length=636, Percent_Identity=21.6981132075472, Blast_Score=81, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6319793, Length=689, Percent_Identity=26.2699564586357, Blast_Score=194, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6322715, Length=476, Percent_Identity=25.2100840336134, Blast_Score=134, Evalue=5e-32, Organism=Drosophila melanogaster, GI21356111, Length=477, Percent_Identity=23.2704402515723, Blast_Score=164, Evalue=3e-40, Organism=Drosophila melanogaster, GI20129717, Length=406, Percent_Identity=25.8620689655172, Blast_Score=144, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 79622; Mature: 79622
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSNLQYQAPDFSLIKNE CCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCEECCCCHHHHCCC HFTPALEQGMAEHYQEILAIANNPAAATFNNTIVAMEKSGALLSRASSVFYNLAGSNSNP CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCHHHHHHHHHHEEECCCCCCC ELRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRANLGLTPEAVRLVEVYHQRFIMA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC GAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVIVESKNELAGLTDSDITSAAN CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCHHHHCCC DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLSGENETASLVSRLAQ CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LRAERATLLGYENWASYRLAPQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMITKTG HHHHHHHHCCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCC GDFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLEDGVFYTLKELYGVTLKPRPD CCEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM CCCCCCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEE NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEED ECCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCHHHHH WAAHPKVLANYAKHYETGKPIPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPD HCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCC MPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGGYSASYYAYMWSEILAADAFA CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH YVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQTL EEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MRKRFIAIAIGATLTAGFMAGCSNTESKAPNAMSVQAQNPLFQVSNLQYQAPDFSLIKNE CCCEEEEEEECHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCEECCCCHHHHCCC HFTPALEQGMAEHYQEILAIANNPAAATFNNTIVAMEKSGALLSRASSVFYNLAGSNSNP CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCHHHHHHHHHHEEECCCCCCC ELRKIQGEMAPKMAAHSDNINLNPALFARIEAIYNDRANLGLTPEAVRLVEVYHQRFIMA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC GAKLTDEQKVKIRALNEEQSTLTNEFSQRLLRLTKEIAVIVESKNELAGLTDSDITSAAN CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCHHHHCCC DAKAAGHDGKYLINITNTTRQPVLASLENRELRQRIWEASANRGLSGENETASLVSRLAQ CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LRAERATLLGYENWASYRLAPQMAKTPEAVYSMFGSMVPAVVANTEKEAADIQAMITKTG HHHHHHHHCCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCC GDFELAPWDWEFYAEKVRQEKYALDGNSIRPYFEFNRVLEDGVFYTLKELYGVTLKPRPD CCEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LPVYHPDVKAYEMFDADGSSMAIFYADYFAREGKRGGAWMSSFVGQSFLEGTKPVVVNVM CCCCCCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEE NIKKAPEGEPTFVSYNEVTTMFHEMGHGTHGMFSKVTYPSLAGTSVSRDFVEFPSTFEED ECCCCCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCHHHHH WAAHPKVLANYAKHYETGKPIPDELLQKLLKSGSFNQGFDTLEYMAAALVDMEWHSLSPD HCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCC MPLQDVATFEANALKKHGLNISAVPPRYKSTYFAHAFPGGYSASYYAYMWSEILAADAFA CCHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH YVQTQGGLNREIGMKYRKTIREVGNSIAPMEAYKNFRGQEPTTQGLLKRRGLDQTL EEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]