| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175041
Identifier: 126175041
GI number: 126175041
Start: 3337221
End: 3337823
Strand: Direct
Name: 126175041
Synonym: Sbal_2836
Alternate gene names: NA
Gene position: 3337221-3337823 (Clockwise)
Preceding gene: 126175040
Following gene: 126175042
Centisome position: 65.09
GC content: 49.42
Gene sequence:
>603_bases ATGTACCAGATTGCGATTGTGATATTTGATGAATTTACCGATATCGATTTCTTCTTAATGCGCGATATTCTCGGCCGTAC AAAAACCGATTGGACAGTAAAAGTACTCGGGACAAAGCCTAGCCACAGGTCGAGTTTGGGGATGACGGTTGCAACCGATG GTCATGTGGCCGAAGTCACTGATGCCGACGTGGTGTTATTTAGCAGTGGCTACAAAGGCGTGCCAGCCGCGCTCGAAGAT ACTGAGTTTATGTCTGCCCTTAAATTAGATCCCACACGGCAATTGCTTGGCAGTATCTGCGCGGGGTCATTCTTCTTTGC CAAATTAGGCTTACTCGACAATATCTCGGCAACGACTCACCCCGATGCAAAACCCGCATTAGTGGCCATGGGCGTGGATG TAGAAGACTGTGCTCTGGTTATCAATGGCAATATTGCCACCGCGGGTGGCTGCCTGTCCTCACTCTATTTAACCGGCTGG GTCGCTGAGCGCTTATTCGACAGTGCAAAACGCCGCGAAATACACAGGCAGCTTATTCCTGCAGGCCAAGCTGATATTTA TGAGACGCTGATCCAATCATCAATAGCAGCTGCAATTCGCTAG
Upstream 100 bases:
>100_bases AAAAAGCCTTAACCCTAAAAATCGCCAAATAATTGTATAAATTACACAATTCGAGAAGCGTATCTAAAACAACTATCAGC ACAAAGCCAGAGGAAAGCTT
Downstream 100 bases:
>100_bases CAAGTGGTTTAGGTTCGCAGCTAGAAGCAAGGGACACCATGATTACACTAAAAAATCTTCTAGAGGCAATCAAAGCCGAG CATCAAATCACCACCCAGAA
Product: ThiJ/PfpI domain-containing protein
Products: NA
Alternate protein names: ThiJ/PfpI Family Protein; DJ-1/PfpI Family Protein; ThiJ/PfpI Domain Protein; Transcriptional Regulator; Intracellular Protease/Amidase; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family; DJ-1/PfpI Family; AraC-Family Transcriptional Regulator; AraC Family Transcriptional Regulator
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MYQIAIVIFDEFTDIDFFLMRDILGRTKTDWTVKVLGTKPSHRSSLGMTVATDGHVAEVTDADVVLFSSGYKGVPAALED TEFMSALKLDPTRQLLGSICAGSFFFAKLGLLDNISATTHPDAKPALVAMGVDVEDCALVINGNIATAGGCLSSLYLTGW VAERLFDSAKRREIHRQLIPAGQADIYETLIQSSIAAAIR
Sequences:
>Translated_200_residues MYQIAIVIFDEFTDIDFFLMRDILGRTKTDWTVKVLGTKPSHRSSLGMTVATDGHVAEVTDADVVLFSSGYKGVPAALED TEFMSALKLDPTRQLLGSICAGSFFFAKLGLLDNISATTHPDAKPALVAMGVDVEDCALVINGNIATAGGCLSSLYLTGW VAERLFDSAKRREIHRQLIPAGQADIYETLIQSSIAAAIR >Mature_200_residues MYQIAIVIFDEFTDIDFFLMRDILGRTKTDWTVKVLGTKPSHRSSLGMTVATDGHVAEVTDADVVLFSSGYKGVPAALED TEFMSALKLDPTRQLLGSICAGSFFFAKLGLLDNISATTHPDAKPALVAMGVDVEDCALVINGNIATAGGCLSSLYLTGW VAERLFDSAKRREIHRQLIPAGQADIYETLIQSSIAAAIR
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21588; Mature: 21588
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQIAIVIFDEFTDIDFFLMRDILGRTKTDWTVKVLGTKPSHRSSLGMTVATDGHVAEVT CEEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCCEEEEC DADVVLFSSGYKGVPAALEDTEFMSALKLDPTRQLLGSICAGSFFFAKLGLLDNISATTH CCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC PDAKPALVAMGVDVEDCALVINGNIATAGGCLSSLYLTGWVAERLFDSAKRREIHRQLIP CCCCCEEEEECCCHHHEEEEEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGQADIYETLIQSSIAAAIR CCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYQIAIVIFDEFTDIDFFLMRDILGRTKTDWTVKVLGTKPSHRSSLGMTVATDGHVAEVT CEEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEECCCCEEEEC DADVVLFSSGYKGVPAALEDTEFMSALKLDPTRQLLGSICAGSFFFAKLGLLDNISATTH CCCEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC PDAKPALVAMGVDVEDCALVINGNIATAGGCLSSLYLTGWVAERLFDSAKRREIHRQLIP CCCCCEEEEECCCHHHEEEEEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGQADIYETLIQSSIAAAIR CCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA