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The map label for this gene is yeeY [H]

Identifier: 126175028

GI number: 126175028

Start: 3321739

End: 3322638

Strand: Direct

Name: yeeY [H]

Synonym: Sbal_2823

Alternate gene names: 126175028

Gene position: 3321739-3322638 (Clockwise)

Preceding gene: 126175025

Following gene: 126175032

Centisome position: 64.78

GC content: 46.44

Gene sequence:

>900_bases
GTGACCTTAGACCAACTGCTGATGTTTAAAACCGTGGCTGAGGCGGGCTCACTCAAAGCCGCCAGTGACAAGCTACATAA
AACCCAACCCGCCATTAGTCAAAGTATCAAACAGTTAGAATCTCAACTCGATCTCATCTTATTTAACCGTGAAGGTTATC
GACTCGCCATCACAGAGCAAGGCCGAAAACTGCTGCAACATACCCAGCGGGTGCTGAATGAAGCGCAGGAAATGAAGCAA
GTCGCGAAACATTTAGCCAAAGGCAACGAAGCGAGTATCACCTTAGCTTTTGAAGCCTCTTTCAATCTCGCTCGAATTCT
ACCGATTTTAGAACTGACTCAAAATGAGTTCCCCTATACTCAAATCATTCTCAAACAAGAATTTTTAACTGGTGCACTCG
AAGCGTTGAATCAAGATAAAGCCGAAATCATCATCTCCGCGGGCGGAATTGAGCCCATACGCTCGAGTCATTTAGAATTA
GCCTATCTTTTTTCCGGTAGCCTGCTCGATGTCGCCGCGCCGCGCATGCTTGAGCGACATCCGACACTGACCTACGCACG
AGAACTCGTTAACGAATACCAAATCGTGATCCAAGATACGGGCTCAGGTACTGCGAATATTGAGTTTGGGGTACAGGCGG
GGCAACGACGTTGGTATGTTAATGATTTTTATACCAAGAAAATGCTTATTCAAAGTGGCATGGGCTGGGGCAAACTGCCG
CACTATATGATTGAAGATTCACTCAAACAAGGTGCATTAATCGCACTGGAACTACGCGAGAGACAAAACAATATTCAACT
CGATTACTATGTGATGCGAAAACCTCACTCACCTTTGGGCCCAGTCGCCCAAGCACTCTGGCAAAAGCTGATCGCCTTTT
CATCTGAGCTGAATGCTTAG

Upstream 100 bases:

>100_bases
GCGAGAATGGAGTAGATTATGAGCCGACAAAAGATAAATAAATATGGAATAAAATCTAATATCTCATAAACTAATACTTT
ATGACTTGCGAGCAATCCCA

Downstream 100 bases:

>100_bases
GAATTCAAGCTTAAGATTTAGCTTAGTGACTTAAAATGAATTGAAATCAAAAAGTCATAAGCCGTTATATAATCATCGAC
CATAAACAAAAACGCCCCTT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQGRKLLQHTQRVLNEAQEMKQ
VAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYTQIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLEL
AYLFSGSLLDVAAPRMLERHPTLTYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
HYMIEDSLKQGALIALELRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSSELNA

Sequences:

>Translated_299_residues
MTLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQGRKLLQHTQRVLNEAQEMKQ
VAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYTQIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLEL
AYLFSGSLLDVAAPRMLERHPTLTYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
HYMIEDSLKQGALIALELRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSSELNA
>Mature_298_residues
TLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQGRKLLQHTQRVLNEAQEMKQV
AKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYTQIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLELA
YLFSGSLLDVAAPRMLERHPTLTYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLPH
YMIEDSLKQGALIALELRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSSELNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=258, Percent_Identity=32.9457364341085, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1786508, Length=307, Percent_Identity=29.6416938110749, Blast_Score=101, Evalue=7e-23,
Organism=Escherichia coli, GI1789492, Length=254, Percent_Identity=28.3464566929134, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787949, Length=256, Percent_Identity=24.21875, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI157672245, Length=173, Percent_Identity=30.0578034682081, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI87082132, Length=280, Percent_Identity=24.2857142857143, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786401, Length=277, Percent_Identity=23.826714801444, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788481, Length=272, Percent_Identity=27.2058823529412, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33724; Mature: 33593

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQ
CCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEHH
GRKLLQHTQRVLNEAQEMKQVAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHH
QIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLELAYLFSGSLLDVAAPRMLERH
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHC
PTLTYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
CHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC
HYMIEDSLKQGALIALELRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSSELNA
HHHHHHHHCCCCEEEEEEHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQ
CHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEHH
GRKLLQHTQRVLNEAQEMKQVAKHLAKGNEASITLAFEASFNLARILPILELTQNEFPYT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHH
QIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLELAYLFSGSLLDVAAPRMLERH
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHHC
PTLTYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKLP
CHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCC
HYMIEDSLKQGALIALELRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIAFSSELNA
HHHHHHHHCCCCEEEEEEHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]