| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is cysZ [H]
Identifier: 126174869
GI number: 126174869
Start: 3116328
End: 3117107
Strand: Direct
Name: cysZ [H]
Synonym: Sbal_2657
Alternate gene names: 126174869
Gene position: 3116328-3117107 (Clockwise)
Preceding gene: 126174864
Following gene: 126174870
Centisome position: 60.78
GC content: 47.69
Gene sequence:
>780_bases ATGACACAGAAGAAAACCTTGCCCTTCCCAGCCAAAAGCGGCGTTAATTATTTTCTCGATGGCTTTGGTTTAATTACACG TAAAGGCCTGCGCACTTTCGTATTTATTCCCTTGATGATCAACCTGCTGCTGTTTGCAGGCGTCATTTATGTAGCAATAG GCCAGTTGGACGCCATGTTCACTTGGATGAACGCCCAGCTGCCTGACTACTTAAGCTGGTTAAACTTTTTACTTTGGCCG CTGGCAGTCACCACTATGCTGGTGATGCTCGCCTTTGTGTTTAGCTCGGTGATGAACTGGCTCGCCGCCCCCTTTAATGG TCTGTTGGCTGAAAAAGTCGAGCAACTATTAACTGGCAAGCCGCTGAATACCGGTACTGGCATCGATTTAATCAAAGACT TACCGCGTATCCTTGGGCGTGAGTGGATCAAACTCAAGTACTATCTGCCCCGCGCATTGGTGTTTTTATTGCTGTTTTTA GTGCCTATGGTGGGCCAAACGCTGGCGCCAATCTTATGGTTCCTGTTCAGCGCTTGGATGATGTCAATTCAGTACTGCGA TTACCCCTTCGATAACCATAAGGTCAGTTTTAAAGATATGCGCTTTGCCTTGAATCAAACCCGTGGCACCAGTTTTAGCT TTGGCGCCACTGTGACGCTATTTTCGATGATCCCAATCGTCAACTTTATCGTGATGCCTGTGGCGATTTGTGGCGCAACG GCGATGTGGGTCGACAAGTATCGTGAAGCCTACCGCAATCATGCAATAGCACCAGAATAA
Upstream 100 bases:
>100_bases GGCTTTTAGCTTGTCATCTGCCCATGAGTTGATCACAATCGCAGTTATCTTTATATCAGGCTGTCTCTCAAGCTGTAGCC CAACTTTTTGGAAAGACGAT
Downstream 100 bases:
>100_bases TTAACGATACAAATACTTATCTAAAATGATGTGGGTTTGATATTGATTCCTGCAACATAAAAACAGCCTCAATTGAGGCT GTTTTTATTGATAGGCTTTT
Product: putative sulfate transport protein CysZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTQKKTLPFPAKSGVNYFLDGFGLITRKGLRTFVFIPLMINLLLFAGVIYVAIGQLDAMFTWMNAQLPDYLSWLNFLLWP LAVTTMLVMLAFVFSSVMNWLAAPFNGLLAEKVEQLLTGKPLNTGTGIDLIKDLPRILGREWIKLKYYLPRALVFLLLFL VPMVGQTLAPILWFLFSAWMMSIQYCDYPFDNHKVSFKDMRFALNQTRGTSFSFGATVTLFSMIPIVNFIVMPVAICGAT AMWVDKYREAYRNHAIAPE
Sequences:
>Translated_259_residues MTQKKTLPFPAKSGVNYFLDGFGLITRKGLRTFVFIPLMINLLLFAGVIYVAIGQLDAMFTWMNAQLPDYLSWLNFLLWP LAVTTMLVMLAFVFSSVMNWLAAPFNGLLAEKVEQLLTGKPLNTGTGIDLIKDLPRILGREWIKLKYYLPRALVFLLLFL VPMVGQTLAPILWFLFSAWMMSIQYCDYPFDNHKVSFKDMRFALNQTRGTSFSFGATVTLFSMIPIVNFIVMPVAICGAT AMWVDKYREAYRNHAIAPE >Mature_258_residues TQKKTLPFPAKSGVNYFLDGFGLITRKGLRTFVFIPLMINLLLFAGVIYVAIGQLDAMFTWMNAQLPDYLSWLNFLLWPL AVTTMLVMLAFVFSSVMNWLAAPFNGLLAEKVEQLLTGKPLNTGTGIDLIKDLPRILGREWIKLKYYLPRALVFLLLFLV PMVGQTLAPILWFLFSAWMMSIQYCDYPFDNHKVSFKDMRFALNQTRGTSFSFGATVTLFSMIPIVNFIVMPVAICGATA MWVDKYREAYRNHAIAPE
Specific function: Possibly involved in sulfate transport [H]
COG id: COG2981
COG function: function code E; Uncharacterized protein involved in cysteine biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CysZ family [H]
Homologues:
Organism=Escherichia coli, GI1788753, Length=241, Percent_Identity=53.5269709543568, Blast_Score=280, Evalue=1e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022985 - InterPro: IPR007496 [H]
Pfam domain/function: PF04401 DUF540 [H]
EC number: NA
Molecular weight: Translated: 29498; Mature: 29366
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKKTLPFPAKSGVNYFLDGFGLITRKGLRTFVFIPLMINLLLFAGVIYVAIGQLDAMF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWMNAQLPDYLSWLNFLLWPLAVTTMLVMLAFVFSSVMNWLAAPFNGLLAEKVEQLLTGK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC PLNTGTGIDLIKDLPRILGREWIKLKYYLPRALVFLLLFLVPMVGQTLAPILWFLFSAWM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSIQYCDYPFDNHKVSFKDMRFALNQTRGTSFSFGATVTLFSMIPIVNFIVMPVAICGAT HHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AMWVDKYREAYRNHAIAPE HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TQKKTLPFPAKSGVNYFLDGFGLITRKGLRTFVFIPLMINLLLFAGVIYVAIGQLDAMF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TWMNAQLPDYLSWLNFLLWPLAVTTMLVMLAFVFSSVMNWLAAPFNGLLAEKVEQLLTGK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC PLNTGTGIDLIKDLPRILGREWIKLKYYLPRALVFLLLFLVPMVGQTLAPILWFLFSAWM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSIQYCDYPFDNHKVSFKDMRFALNQTRGTSFSFGATVTLFSMIPIVNFIVMPVAICGAT HHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AMWVDKYREAYRNHAIAPE HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA