Click here to switch to the map view.

The map label for this gene is yfjK [C]

Identifier: 126174861

GI number: 126174861

Start: 3106357

End: 3107160

Strand: Direct

Name: yfjK [C]

Synonym: Sbal_2649

Alternate gene names: 126174861

Gene position: 3106357-3107160 (Clockwise)

Preceding gene: 126174860

Following gene: 126174862

Centisome position: 60.58

GC content: 37.31

Gene sequence:

>804_bases
ATGGTGATACTCTTTTACTTTGGCGAGATAAAGCGTACCACTTTTCAGCAGTTGGCTTCTTCTACACCTCGATTAGAGTG
TCGCAGTTATTATCTGAATTCTGGTACTCTAGTTGAAGGCGTTAATCTTTCATGCAAAAACATATTTGTTAGAGGCCCTA
AAAAGGGAAGGCGGGCTGATAAACCAATGACAAGTGAAGATTTTTGGAACCTAGCAGGTAGAGCTGGCAGATGGGGGCAA
GAGTTCCAAGGAAATATTTTCTGCTTAGATGTAAACAATGAGAAACTATGGCCAAATGGTAAACCAGAGAAAAGAACACC
CTATATAATTACACCATCTGTCGATAAACAAATGGAGAACACTGATAAGATCATAAAATATATTAAAGATGGCACTCCAA
GAAGTGAATCAGTCGGCAATATAGATTACGAGTATTTAATCACTTATATAATTGAAGGCATTGCAACGAACAATAAAGCA
ATCCTTGGTAGCTTAGGTTCATCCGATGCATCGTCAGAGATAGAACTCATTTTAGAAAATTGTGAATTACCACATGAAAT
ATTTCGTAAAAACGCGGGTATAAGCCCTATAGCAATTGAAGAGCTATATAGCTATTTTCAGAACAAAGCTGAAAATGATG
ATTTAGAATCATTGATCCCACCTCATCCATCTAGTGAAAATGCGGTTGTAGAACTAACAAAAGTGCTTAGCCGAATTAAC
AAGTATCTATCCCCAAGCAGTTTTGGCTTTATGTTCTGGTCTAATCCCATCGGACACTTAATTTTGAGACAGTATGGTCA
ATAA

Upstream 100 bases:

>100_bases
ATGACAATCAATGCATTTAGCTATGTGTGCTATCGAAAAGCCCTGTTCTAACAGCACGGAAATCTGGTATCGTCTTGCTT
CGGTCAACTGTTGATAATTC

Downstream 100 bases:

>100_bases
ATTAAGAGGTCTATATGAGTCTGAAGAAATCACATAAGAGTTATCCGCAGGCATTTAAAGATGAAGCCGTCTTGATGGTG
CTAGAACAAGGTTATAGCGT

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: DEAD/DEAH Box Helicase Domain-Containing Protein; Helicase Conserved C-Terminal Domain-Containing Protein; ATP-Dependent RNA Helicase DEAD Box Family Protein; Superfamily II Helicase; DEAD/DEAH Box Helicase-Like; DEAD/DEAH Box Helicase; DNA Helicase; DEAD/DEAH Box Helicase Domain Protein

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MVILFYFGEIKRTTFQQLASSTPRLECRSYYLNSGTLVEGVNLSCKNIFVRGPKKGRRADKPMTSEDFWNLAGRAGRWGQ
EFQGNIFCLDVNNEKLWPNGKPEKRTPYIITPSVDKQMENTDKIIKYIKDGTPRSESVGNIDYEYLITYIIEGIATNNKA
ILGSLGSSDASSEIELILENCELPHEIFRKNAGISPIAIEELYSYFQNKAENDDLESLIPPHPSSENAVVELTKVLSRIN
KYLSPSSFGFMFWSNPIGHLILRQYGQ

Sequences:

>Translated_267_residues
MVILFYFGEIKRTTFQQLASSTPRLECRSYYLNSGTLVEGVNLSCKNIFVRGPKKGRRADKPMTSEDFWNLAGRAGRWGQ
EFQGNIFCLDVNNEKLWPNGKPEKRTPYIITPSVDKQMENTDKIIKYIKDGTPRSESVGNIDYEYLITYIIEGIATNNKA
ILGSLGSSDASSEIELILENCELPHEIFRKNAGISPIAIEELYSYFQNKAENDDLESLIPPHPSSENAVVELTKVLSRIN
KYLSPSSFGFMFWSNPIGHLILRQYGQ
>Mature_267_residues
MVILFYFGEIKRTTFQQLASSTPRLECRSYYLNSGTLVEGVNLSCKNIFVRGPKKGRRADKPMTSEDFWNLAGRAGRWGQ
EFQGNIFCLDVNNEKLWPNGKPEKRTPYIITPSVDKQMENTDKIIKYIKDGTPRSESVGNIDYEYLITYIIEGIATNNKA
ILGSLGSSDASSEIELILENCELPHEIFRKNAGISPIAIEELYSYFQNKAENDDLESLIPPHPSSENAVVELTKVLSRIN
KYLSPSSFGFMFWSNPIGHLILRQYGQ

Specific function: Unknown

COG id: COG1204

COG function: function code R; Superfamily II helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30279; Mature: 30279

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILFYFGEIKRTTFQQLASSTPRLECRSYYLNSGTLVEGVNLSCKNIFVRGPKKGRRAD
CEEEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCCEECEEEEECCCCCCCCC
KPMTSEDFWNLAGRAGRWGQEFQGNIFCLDVNNEKLWPNGKPEKRTPYIITPSVDKQMEN
CCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCEEECCCHHHHHHH
TDKIIKYIKDGTPRSESVGNIDYEYLITYIIEGIATNNKAILGSLGSSDASSEIELILEN
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHC
CELPHEIFRKNAGISPIAIEELYSYFQNKAENDDLESLIPPHPSSENAVVELTKVLSRIN
CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHH
KYLSPSSFGFMFWSNPIGHLILRQYGQ
HHCCCCCCEEEEECCCHHHHHHHHCCC
>Mature Secondary Structure
MVILFYFGEIKRTTFQQLASSTPRLECRSYYLNSGTLVEGVNLSCKNIFVRGPKKGRRAD
CEEEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCCEECEEEEECCCCCCCCC
KPMTSEDFWNLAGRAGRWGQEFQGNIFCLDVNNEKLWPNGKPEKRTPYIITPSVDKQMEN
CCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCCCEEECCCHHHHHHH
TDKIIKYIKDGTPRSESVGNIDYEYLITYIIEGIATNNKAILGSLGSSDASSEIELILEN
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHC
CELPHEIFRKNAGISPIAIEELYSYFQNKAENDDLESLIPPHPSSENAVVELTKVLSRIN
CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHH
KYLSPSSFGFMFWSNPIGHLILRQYGQ
HHCCCCCCEEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA