| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174857
Identifier: 126174857
GI number: 126174857
Start: 3102184
End: 3103020
Strand: Direct
Name: 126174857
Synonym: Sbal_2644
Alternate gene names: NA
Gene position: 3102184-3103020 (Clockwise)
Preceding gene: 126174847
Following gene: 126174859
Centisome position: 60.5
GC content: 38.95
Gene sequence:
>837_bases ATGGAAGACAACCTCGATACTATCGGTAAAGCATTGACTGAGATGGCCAGAGGAGAGTTGACGGAACTTTCTTCGCTGCT TGCTTCAGCATGTACACATGACATTAATGAAAACAAAATTAACTGTTATTACTTGAAAGTCGATGCCAATGGCAGGCCTC GATTAAACGAGCTCATAAAGTACATGAGCATGAAAATCACCGACTACACAATTCCTCGAAATAGAATAAATAAAGCCAAA CAAAAACTCATCGAATCTGGATGTACAGATGAAATAACAAAGATAGCTCTTGAAGCAAGGAAGCTTTTCACCAAACTCGA ACTGACAGGGGAAGGCGGTGAACTGCTTTTGTTCGCATTAACTGAAAGTATCCTCAAGTTTCCCCAAGTACTATGCAAAA TGAGCTTAAAGACTGATGAGCAGATGCACTTTCATGGCGCAGATGGAGTCTTTCTAGGGGTAGATGACAATGACATGTTA TGTGTTTACTGGGGGGAGTCAAAGTTACATGCAACTCATTCCTCGGCAATATCTGAGTGCATCACAAGTATTGCTAATAT TCTAAAAATGGAACCAGATGTTGATAGTGACATTCGCCTAATAGACTATATAGACCTCGACAACAGCTCACTAGAAGAAG CGATAAAAAACTACTTTGATTACACTTCACCAAGTTATGATCAACTACGTCCATGCGCTGTTTTTTTAGTATCATTTGAT CATTCTGCGTATGAGAAATCAAATACCAAGCTCACAAACGAAAATATTAGAGAAAAAATTGAAAATGATTTCCTTAAACC CCGAATTCAACTCCGAAGTGCGACACTCGACAATTAA
Upstream 100 bases:
>100_bases ATGAGCCACTACACAAATAAAAGTCTCTAATACAAATTGGGATATTTGTAACCAGACAGAACAAGCCTGTACTTTACCAC TTTAAGAGCTATGGATAAAA
Downstream 100 bases:
>100_bases GCAGCTAATTGGTGAAATACCACCGCAGGCTGCTTAAACTTCAAACACTTTTTGGGTCGATAGTTAATTCTATTCTGAGC AAATTCGATTAATTCATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MEDNLDTIGKALTEMARGELTELSSLLASACTHDINENKINCYYLKVDANGRPRLNELIKYMSMKITDYTIPRNRINKAK QKLIESGCTDEITKIALEARKLFTKLELTGEGGELLLFALTESILKFPQVLCKMSLKTDEQMHFHGADGVFLGVDDNDML CVYWGESKLHATHSSAISECITSIANILKMEPDVDSDIRLIDYIDLDNSSLEEAIKNYFDYTSPSYDQLRPCAVFLVSFD HSAYEKSNTKLTNENIREKIENDFLKPRIQLRSATLDN
Sequences:
>Translated_278_residues MEDNLDTIGKALTEMARGELTELSSLLASACTHDINENKINCYYLKVDANGRPRLNELIKYMSMKITDYTIPRNRINKAK QKLIESGCTDEITKIALEARKLFTKLELTGEGGELLLFALTESILKFPQVLCKMSLKTDEQMHFHGADGVFLGVDDNDML CVYWGESKLHATHSSAISECITSIANILKMEPDVDSDIRLIDYIDLDNSSLEEAIKNYFDYTSPSYDQLRPCAVFLVSFD HSAYEKSNTKLTNENIREKIENDFLKPRIQLRSATLDN >Mature_278_residues MEDNLDTIGKALTEMARGELTELSSLLASACTHDINENKINCYYLKVDANGRPRLNELIKYMSMKITDYTIPRNRINKAK QKLIESGCTDEITKIALEARKLFTKLELTGEGGELLLFALTESILKFPQVLCKMSLKTDEQMHFHGADGVFLGVDDNDML CVYWGESKLHATHSSAISECITSIANILKMEPDVDSDIRLIDYIDLDNSSLEEAIKNYFDYTSPSYDQLRPCAVFLVSFD HSAYEKSNTKLTNENIREKIENDFLKPRIQLRSATLDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31541; Mature: 31541
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDNLDTIGKALTEMARGELTELSSLLASACTHDINENKINCYYLKVDANGRPRLNELIK CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHH YMSMKITDYTIPRNRINKAKQKLIESGCTDEITKIALEARKLFTKLELTGEGGELLLFAL HHHHHHHEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHH TESILKFPQVLCKMSLKTDEQMHFHGADGVFLGVDDNDMLCVYWGESKLHATHSSAISEC HHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHH ITSIANILKMEPDVDSDIRLIDYIDLDNSSLEEAIKNYFDYTSPSYDQLRPCAVFLVSFD HHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHHCCHHEEEEEECC HSAYEKSNTKLTNENIREKIENDFLKPRIQLRSATLDN CHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCC >Mature Secondary Structure MEDNLDTIGKALTEMARGELTELSSLLASACTHDINENKINCYYLKVDANGRPRLNELIK CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHH YMSMKITDYTIPRNRINKAKQKLIESGCTDEITKIALEARKLFTKLELTGEGGELLLFAL HHHHHHHEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEHHHH TESILKFPQVLCKMSLKTDEQMHFHGADGVFLGVDDNDMLCVYWGESKLHATHSSAISEC HHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHH ITSIANILKMEPDVDSDIRLIDYIDLDNSSLEEAIKNYFDYTSPSYDQLRPCAVFLVSFD HHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCHHHCCHHEEEEEECC HSAYEKSNTKLTNENIREKIENDFLKPRIQLRSATLDN CHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA