Click here to switch to the map view.

The map label for this gene is rpfG [H]

Identifier: 126174855

GI number: 126174855

Start: 3099882

End: 3101087

Strand: Reverse

Name: rpfG [H]

Synonym: Sbal_2642

Alternate gene names: 126174855

Gene position: 3101087-3099882 (Counterclockwise)

Preceding gene: 126174856

Following gene: 126174854

Centisome position: 60.48

GC content: 44.2

Gene sequence:

>1206_bases
GTGGCAAAAGTACCCCAAAGAAAATTATTACTATCAGAAATTCAACTTGGCATGAGAGTCAAGTTACCTTTGTCATGGAC
GAATCACCCCTTTTTATTTAACCGCGTTGATATTAGCAGTGCCGCTCAAATCGAGATGATCCGAGGCCTAGGTGTCCCCT
ATGTGCTTTTATTATCGGAGTTGAATCCTGCGTCTGAGGTTGTTGAGGAAGATGAGAATGTCGAAGATGAAATAGCAGCT
GAACCCGAACGGGATCTCAAGGCCGATACCCGTAAGGCGATTCGCTTAAGCCAAAAGCGTTTCCTCGAAAACGTTAATAA
TTGCCGTAATGTGTTTGGTAAAATAGTCAGCGATCCTGAAGGCGCCTATCGATTATCGGCAGCATTGGTTGAAGACTTGT
TAAGTCATTTACAAGAGGTTGAAAAACCTTTTCTCACCTTGGTAGGGATGGATGATAGTGACGTCAGTGTCACCCAGCAC
GGCGTATCCGTTGCGGTATTGGCAATGATGATGGGTCATGCACTGGATTTAAGCCCAAGGGAACTGCGTGATATTGCTCT
TGGCAGTTTGCTACATGATATTGGCAAACTGAAAGTGCCTGATGTTATTCGTCGTAAGCGCGGTGCCTTAACACCACATG
AAGCTAATTATCTGCAAATGCACCCTAACTTTGCCTATGACATGCTTAACCGTTCTGGACTGTTTCCAAAGGAAGTTCTG
CATATTGTGCTGCACCACCATGAGTTTATTGATGGTTCCGGTTTCCCCGATGGTTTAACTGATCATAAAATTCCGATCAC
GACTCAAATAGTCAGTTTGGCAAATGACTATGACCAGCAACTCAGTGGCCAACAAATATCTTCTCCTCAGGTTGCCTTAG
GCTATTTATTTAAAAATCGGGCAACGAAACATGCCGAATCCTTAATTGCTATTTTGGTTAAAATCCTTGGCATTTATCCC
CCTGGGACAATTGTTAGGTTATCGGATGATAGCGTGGCAAAAGTCATGATGACCACTAAAGAAGTGAGTCAGCCCCAAGT
GTGGGCTTGTAAAGAAGACGGGAGTGAAGCATCGCTGCGTTTCTTAAGTGACGAAGGCGTGACAGTGCAAAAAGCCATCA
AAGCGGAAGAATTGTCCGAGGGCGCTATTCGCACCTTGCAAGTCGATAAAGGGGTTAGTTTTTATTTTAGTTCGCTACAA
ACTTGA

Upstream 100 bases:

>100_bases
ATCTATAGTTATATGTACTTAGCTTGAATGTGCCCTGTTGGATACGCAGATGAGGTCATCTGTTTATGTCCTGCACCACA
TTTGAAAGGAGTCATACTGC

Downstream 100 bases:

>100_bases
ATCTTATGCGCTAAGTTCCGTATTCTATCCGCTGATATGATTCCCTTAGGGCTAATATGGCGAATGTAAAAGCAGAAAAT
GGCGCAGTAAAATCCAGTGT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MAKVPQRKLLLSEIQLGMRVKLPLSWTNHPFLFNRVDISSAAQIEMIRGLGVPYVLLLSELNPASEVVEEDENVEDEIAA
EPERDLKADTRKAIRLSQKRFLENVNNCRNVFGKIVSDPEGAYRLSAALVEDLLSHLQEVEKPFLTLVGMDDSDVSVTQH
GVSVAVLAMMMGHALDLSPRELRDIALGSLLHDIGKLKVPDVIRRKRGALTPHEANYLQMHPNFAYDMLNRSGLFPKEVL
HIVLHHHEFIDGSGFPDGLTDHKIPITTQIVSLANDYDQQLSGQQISSPQVALGYLFKNRATKHAESLIAILVKILGIYP
PGTIVRLSDDSVAKVMMTTKEVSQPQVWACKEDGSEASLRFLSDEGVTVQKAIKAEELSEGAIRTLQVDKGVSFYFSSLQ
T

Sequences:

>Translated_401_residues
MAKVPQRKLLLSEIQLGMRVKLPLSWTNHPFLFNRVDISSAAQIEMIRGLGVPYVLLLSELNPASEVVEEDENVEDEIAA
EPERDLKADTRKAIRLSQKRFLENVNNCRNVFGKIVSDPEGAYRLSAALVEDLLSHLQEVEKPFLTLVGMDDSDVSVTQH
GVSVAVLAMMMGHALDLSPRELRDIALGSLLHDIGKLKVPDVIRRKRGALTPHEANYLQMHPNFAYDMLNRSGLFPKEVL
HIVLHHHEFIDGSGFPDGLTDHKIPITTQIVSLANDYDQQLSGQQISSPQVALGYLFKNRATKHAESLIAILVKILGIYP
PGTIVRLSDDSVAKVMMTTKEVSQPQVWACKEDGSEASLRFLSDEGVTVQKAIKAEELSEGAIRTLQVDKGVSFYFSSLQ
T
>Mature_400_residues
AKVPQRKLLLSEIQLGMRVKLPLSWTNHPFLFNRVDISSAAQIEMIRGLGVPYVLLLSELNPASEVVEEDENVEDEIAAE
PERDLKADTRKAIRLSQKRFLENVNNCRNVFGKIVSDPEGAYRLSAALVEDLLSHLQEVEKPFLTLVGMDDSDVSVTQHG
VSVAVLAMMMGHALDLSPRELRDIALGSLLHDIGKLKVPDVIRRKRGALTPHEANYLQMHPNFAYDMLNRSGLFPKEVLH
IVLHHHEFIDGSGFPDGLTDHKIPITTQIVSLANDYDQQLSGQQISSPQVALGYLFKNRATKHAESLIAILVKILGIYPP
GTIVRLSDDSVAKVMMTTKEVSQPQVWACKEDGSEASLRFLSDEGVTVQKAIKAEELSEGAIRTLQVDKGVSFYFSSLQT

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44520; Mature: 44389

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVPQRKLLLSEIQLGMRVKLPLSWTNHPFLFNRVDISSAAQIEMIRGLGVPYVLLLSE
CCCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHC
LNPASEVVEEDENVEDEIAAEPERDLKADTRKAIRLSQKRFLENVNNCRNVFGKIVSDPE
CCHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GAYRLSAALVEDLLSHLQEVEKPFLTLVGMDDSDVSVTQHGVSVAVLAMMMGHALDLSPR
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
ELRDIALGSLLHDIGKLKVPDVIRRKRGALTPHEANYLQMHPNFAYDMLNRSGLFPKEVL
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHCCCCCHHHHH
HIVLHHHEFIDGSGFPDGLTDHKIPITTQIVSLANDYDQQLSGQQISSPQVALGYLFKNR
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ATKHAESLIAILVKILGIYPPGTIVRLSDDSVAKVMMTTKEVSQPQVWACKEDGSEASLR
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCEEE
FLSDEGVTVQKAIKAEELSEGAIRTLQVDKGVSFYFSSLQT
EECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCC
>Mature Secondary Structure 
AKVPQRKLLLSEIQLGMRVKLPLSWTNHPFLFNRVDISSAAQIEMIRGLGVPYVLLLSE
CCCCHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHC
LNPASEVVEEDENVEDEIAAEPERDLKADTRKAIRLSQKRFLENVNNCRNVFGKIVSDPE
CCHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GAYRLSAALVEDLLSHLQEVEKPFLTLVGMDDSDVSVTQHGVSVAVLAMMMGHALDLSPR
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
ELRDIALGSLLHDIGKLKVPDVIRRKRGALTPHEANYLQMHPNFAYDMLNRSGLFPKEVL
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHCCCCCHHHHH
HIVLHHHEFIDGSGFPDGLTDHKIPITTQIVSLANDYDQQLSGQQISSPQVALGYLFKNR
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
ATKHAESLIAILVKILGIYPPGTIVRLSDDSVAKVMMTTKEVSQPQVWACKEDGSEASLR
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCEEE
FLSDEGVTVQKAIKAEELSEGAIRTLQVDKGVSFYFSSLQT
EECCCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]