| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is dsbA [H]
Identifier: 126174853
GI number: 126174853
Start: 3098219
End: 3098839
Strand: Reverse
Name: dsbA [H]
Synonym: Sbal_2640
Alternate gene names: 126174853
Gene position: 3098839-3098219 (Counterclockwise)
Preceding gene: 126174854
Following gene: 126174852
Centisome position: 60.44
GC content: 49.92
Gene sequence:
>621_bases ATGAGCGTGTTTAATCGAGTTCGACCTATAGCCGCATTGGCGTGCGGATTAATGCTGAGTGCCAGCTTTGCACTGCAGGC CGCAAGTTTCGAAGAAGGCAAAGATTACGTCACAGTGGCGGGGATTACCGAAGCGCAAAAGCCAGTGCTGCGAGAGTTTT TCTCCTATAACTGCCCACATTGCTATAAGCAAGAACCGCTTATGGACTTGACAGTGCAACTGCTCGGCAAAGACGTGGCT TTTGAGCGTACCCCTGTGGGCGCCGGCCGTCCTGCTTGGGAGCTGAGTCAGCTTGCCTACTATGTGGCGCAAAAATTAAA GATGACTAAGCAAACCCATGGCGCTATTTTCAAGCAAATCCATGAGAAAGGTGAGCAATTTACAGCACCTGAACAGGTTA AAGCCTTCTTTGTCGCCCAAGGCGCTAAGGTGGATGATGTCGATGCCGCAATGAATTCCGTCGATGCCAAATTCACCCTA ATGAATTATGACTCTCAAGCTGAGCTTGCAGGGATCAAGGGCGTACCCTCATTACTGGTGAATGGCCGTTATATGCTGAC GTCGACCGCGCACACGCCAGAAGAGTTAGCTGCATTAGTTAAGTTTTTAGCCGCGAAGTAA
Upstream 100 bases:
>100_bases GTAAAAGCCGAACTTTTAGGTTATCTTTGGGTTCCAAGTTTTGCTTGAGCGAATGTGTCATCCTTATTTAAACCAATGAC GAATAAAAAGAGACAATATA
Downstream 100 bases:
>100_bases CCGCGTTTAATAAATTGCGACTTGACTCATCGCGGCTAACGAATAAGCGCCTTGCGAGCTGCATTGGGAAACTTATCCCG CTATTCGCTAATCTAGCGTT
Product: DSBA oxidoreductase
Products: 3-oxo-D 4-steroid; protein with oxidized disulfide bonds [C]
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSVFNRVRPIAALACGLMLSASFALQAASFEEGKDYVTVAGITEAQKPVLREFFSYNCPHCYKQEPLMDLTVQLLGKDVA FERTPVGAGRPAWELSQLAYYVAQKLKMTKQTHGAIFKQIHEKGEQFTAPEQVKAFFVAQGAKVDDVDAAMNSVDAKFTL MNYDSQAELAGIKGVPSLLVNGRYMLTSTAHTPEELAALVKFLAAK
Sequences:
>Translated_206_residues MSVFNRVRPIAALACGLMLSASFALQAASFEEGKDYVTVAGITEAQKPVLREFFSYNCPHCYKQEPLMDLTVQLLGKDVA FERTPVGAGRPAWELSQLAYYVAQKLKMTKQTHGAIFKQIHEKGEQFTAPEQVKAFFVAQGAKVDDVDAAMNSVDAKFTL MNYDSQAELAGIKGVPSLLVNGRYMLTSTAHTPEELAALVKFLAAK >Mature_205_residues SVFNRVRPIAALACGLMLSASFALQAASFEEGKDYVTVAGITEAQKPVLREFFSYNCPHCYKQEPLMDLTVQLLGKDVAF ERTPVGAGRPAWELSQLAYYVAQKLKMTKQTHGAIFKQIHEKGEQFTAPEQVKAFFVAQGAKVDDVDAAMNSVDAKFTLM NYDSQAELAGIKGVPSLLVNGRYMLTSTAHTPEELAALVKFLAAK
Specific function: Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790291, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1348 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023205 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 22573; Mature: 22442
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFNRVRPIAALACGLMLSASFALQAASFEEGKDYVTVAGITEAQKPVLREFFSYNCPH CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCC CYKQEPLMDLTVQLLGKDVAFERTPVGAGRPAWELSQLAYYVAQKLKMTKQTHGAIFKQI CCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEKGEQFTAPEQVKAFFVAQGAKVDDVDAAMNSVDAKFTLMNYDSQAELAGIKGVPSLLV HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHCCCCCHHHHH NGRYMLTSTAHTPEELAALVKFLAAK CCEEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure SVFNRVRPIAALACGLMLSASFALQAASFEEGKDYVTVAGITEAQKPVLREFFSYNCPH CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCC CYKQEPLMDLTVQLLGKDVAFERTPVGAGRPAWELSQLAYYVAQKLKMTKQTHGAIFKQI CCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HEKGEQFTAPEQVKAFFVAQGAKVDDVDAAMNSVDAKFTLMNYDSQAELAGIKGVPSLLV HHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHCCCCCHHHHH NGRYMLTSTAHTPEELAALVKFLAAK CCEEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3-oxo-D 5-steroid; protein with reduced SH groups [C]
Specific reaction: 3-oxo-D 5-steroid = 3-oxo-D 4-steroid protein with reduced SH groups = protein with oxidized disulfide bonds [C]
General reaction: Isomerases; Intramolecular Oxidoreductases; Transposing S-S Bonds [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA