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The map label for this gene is yccF [H]

Identifier: 126174815

GI number: 126174815

Start: 3045725

End: 3046063

Strand: Direct

Name: yccF [H]

Synonym: Sbal_2602

Alternate gene names: 126174815

Gene position: 3045725-3046063 (Clockwise)

Preceding gene: 126174813

Following gene: 126174819

Centisome position: 59.4

GC content: 47.79

Gene sequence:

>339_bases
ATGGCAGTATTACGCTTAATATTCAACATCGCTTGGTTTGTGCTCGGTGGATTTGTGATGGGACTCGCTTGGTGGCTCGC
AGGTATCCTGTGTTTTATCAGCATTATTGGTATTCCCTTTGGCCGCGCCTGCTTTGTTATCGGTGAAATGACCTTCTGGC
CATTTGGCCAAGAACTAATCAGCCGTCGTCACCTAACCGGACGTGACGATTTAGGCACAGGTGCCCTAGGCATGGTGGGA
AATATTATTTGGTTCTTGCTGTTTGGGATCTGGTTAGCCATAGGCCACTTAGCCCATGCCCTAGCCTGTTTTGTGACAAT
TATCGGTATTCCCTTTTGA

Upstream 100 bases:

>100_bases
GTTTCTCGCTTAGTCATTGGCATATATTCAGTTTATCAAAGCTAACAGCATTCATTACAGCTAACGATAAAGGCTAAAAA
AGTAACATAAGGAGTTTTCA

Downstream 100 bases:

>100_bases
ATACAGCATCTTAAACTGGCGTTACTCAGCCTAACACCGATAGGCCAAACCGTTGTGGCTAAAGCCTAATCGATTATGAG
TTAACCGTCTTAGCGCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAVLRLIFNIAWFVLGGFVMGLAWWLAGILCFISIIGIPFGRACFVIGEMTFWPFGQELISRRHLTGRDDLGTGALGMVG
NIIWFLLFGIWLAIGHLAHALACFVTIIGIPF

Sequences:

>Translated_112_residues
MAVLRLIFNIAWFVLGGFVMGLAWWLAGILCFISIIGIPFGRACFVIGEMTFWPFGQELISRRHLTGRDDLGTGALGMVG
NIIWFLLFGIWLAIGHLAHALACFVTIIGIPF
>Mature_111_residues
AVLRLIFNIAWFVLGGFVMGLAWWLAGILCFISIIGIPFGRACFVIGEMTFWPFGQELISRRHLTGRDDLGTGALGMVGN
IIWFLLFGIWLAIGHLAHALACFVTIIGIPF

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=111, Percent_Identity=39.6396396396396, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 12369; Mature: 12238

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLRLIFNIAWFVLGGFVMGLAWWLAGILCFISIIGIPFGRACFVIGEMTFWPFGQELI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHH
SRRHLTGRDDLGTGALGMVGNIIWFLLFGIWLAIGHLAHALACFVTIIGIPF
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVLRLIFNIAWFVLGGFVMGLAWWLAGILCFISIIGIPFGRACFVIGEMTFWPFGQELI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHH
SRRHLTGRDDLGTGALGMVGNIIWFLLFGIWLAIGHLAHALACFVTIIGIPF
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]