| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126174793
Identifier: 126174793
GI number: 126174793
Start: 3025443
End: 3025874
Strand: Reverse
Name: 126174793
Synonym: Sbal_2580
Alternate gene names: NA
Gene position: 3025874-3025443 (Counterclockwise)
Preceding gene: 126174796
Following gene: 126174792
Centisome position: 59.01
GC content: 45.83
Gene sequence:
>432_bases ATGAATTCAGTTAAAAAAACAGCAGTTGCAGTAGCCTTAGGCTCAGTCGTCATAAGTTCAGCTTTTGCTGTCAATGCCCA AACTAACCCTTTTGGTTTTGAAGCAATGGATGCGGGTTATCAAATTGTCGGCTCAGAAGGTAAATGTGGTGAAGCCAAAT GCGGCGCGGATATGAAGAAAGCCGCCGCTGAAAAAGCCAAAGAAGGCAAATGTGGTGAAGCTAAATGTGGTGCCGAGATG AAAAAAGCGGCTGCAGATAAAGCCCATGAAGGCAAATGTGGCGAAGCGAAATGCGGTGCCGATGTGAAAAAAGCCGCGAT GGCGAAAGCACACGAAGGTAAGTGTGGTGAAGCGAAATGTGGCGCGGATATGAAGAAAACCGCCGAGAAAGTTGACGCTA AAGTCGAAGCCGTTAAAAAAGAAATGAAATAA
Upstream 100 bases:
>100_bases TTTTTGCAATAGAATTGAAACAGGGCAGGTCTTTTGCAGTAAGCCAGCTATTTCTACTGTTGTTGGTCAACATTACTCAA TAAACAAGAAGGGATTATTT
Downstream 100 bases:
>100_bases ATCCGACTGCACTGATCCCGCAGTGATGGGGGTTATTGAGTCTTAAGAGGCCAGCCCGCGCTGGTCTCTTTTGTTTTATC CTAAAGCGATGACAGCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MNSVKKTAVAVALGSVVISSAFAVNAQTNPFGFEAMDAGYQIVGSEGKCGEAKCGADMKKAAAEKAKEGKCGEAKCGAEM KKAAADKAHEGKCGEAKCGADVKKAAMAKAHEGKCGEAKCGADMKKTAEKVDAKVEAVKKEMK
Sequences:
>Translated_143_residues MNSVKKTAVAVALGSVVISSAFAVNAQTNPFGFEAMDAGYQIVGSEGKCGEAKCGADMKKAAAEKAKEGKCGEAKCGAEM KKAAADKAHEGKCGEAKCGADVKKAAMAKAHEGKCGEAKCGADMKKTAEKVDAKVEAVKKEMK >Mature_143_residues MNSVKKTAVAVALGSVVISSAFAVNAQTNPFGFEAMDAGYQIVGSEGKCGEAKCGADMKKAAAEKAKEGKCGEAKCGAEM KKAAADKAHEGKCGEAKCGADVKKAAMAKAHEGKCGEAKCGADMKKTAEKVDAKVEAVKKEMK
Specific function: Unknown
COG id: COG3767
COG function: function code S; Uncharacterized low-complexity protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14580; Mature: 14580
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 10.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVKKTAVAVALGSVVISSAFAVNAQTNPFGFEAMDAGYQIVGSEGKCGEAKCGADMKK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCHHHH AAAEKAKEGKCGEAKCGAEMKKAAADKAHEGKCGEAKCGADVKKAAMAKAHEGKCGEAKC HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC GADMKKTAEKVDAKVEAVKKEMK CCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSVKKTAVAVALGSVVISSAFAVNAQTNPFGFEAMDAGYQIVGSEGKCGEAKCGADMKK CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCHHHH AAAEKAKEGKCGEAKCGAEMKKAAADKAHEGKCGEAKCGADVKKAAMAKAHEGKCGEAKC HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC GADMKKTAEKVDAKVEAVKKEMK CCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA