| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126174754
Identifier: 126174754
GI number: 126174754
Start: 2972964
End: 2974442
Strand: Reverse
Name: 126174754
Synonym: Sbal_2541
Alternate gene names: NA
Gene position: 2974442-2972964 (Counterclockwise)
Preceding gene: 126174756
Following gene: 126174752
Centisome position: 58.01
GC content: 49.09
Gene sequence:
>1479_bases ATGAAGGCCATCATCATAGGTTCGACAAAACACCTATTCTTAGCCGCATTGTATGCGAGCATTGGCATAGCGCTGGCGTT ACTCGCGACCGGGATTTACTTTCTCAATGCGCGTCCCGAATTGTCGCTTTGGCATACGGTCGAGTTAGAAAATGAGTTCC ATTACAATACTAAACTCGCTAATTTTAATGAGTACTTAGCGCTAGAAGAGCGCTTATTCGCCGAAGTTGAGCGCAAAGTC GTCCAAAAAATTCCTGCCAATGAATTTTCTCCCGTGAACCGCTATGTCAAAAATAGCTTATCCGATCCTGCACATTGGCC CCAAAATTGGAATCGCAGTTATGAATGGCCCAAAGCCGATGCCGAGTTTGGGGTATTGCTGCTCCATGGCATGTCAGACT CGCCCTATGCCTTATCCAATGTGGCAGCGCATTTTAAAGATAAAGCCCATGTGCTGGGTTTAAGACTACCAGGACATGGC ACCATTCCGAGTGGCTTGACTGAGGTTTATTGGCAAGATCTCGCCGCCGCAGTGAACTTAGCCACAGCGCATATGCGGCA ATCTCTGAAGGGTAAACCGCTATTTGTTGTAGGCTTTTCGACCGGTGCCGCCGTAGCGCTTAACCATGAGTTAGAACGTA TTAGCCAAGATAAAAAACCAGATTATGCTGGGATGATTTTTATCTCTCCCGCCATAGGGCTAGCGCCATTAGCGGCGGCC GCGCGCTGGCAGAGTTGGATAGGCCGATTGCTAGAACTGGATAAACTGCAGTGGAACAGCATTCAAGTGGAGTACGATCC GTTTAAATACACTTCTTTTGCGGTCAATGCGGGGGATGTGGTGTATCAACTAGCGCTACGTAACCAAGGTTTATTGGCTG GATTAACTTTGCCGCAAAGGGCGCAAATTCCGTCGATACTCACTTTTCAGTCGGTAGTGGACGCAACCGTTTCAACCTCG GCTGTGGTGAATCATTTTTATCAGACATTGCCAGAAAATGGCCACGAACTCGTGCTGTTCGACATGAACCGACTCGATGT GAATGCTAAAATGGTGTCCAATGATCCACTCGTAGGCTTGTTGGCGAGTATCAATAGTCCTGCGCTGCATTATCGCGGCA CTGTGGTGGAAAATATCAGTAATGAGACCACGCAAGTTCAAGCGCGCAGCTTTGGTTTAGCTGCGCAGGGTAAAGTGGTC ACAGAAGGCAATGAACAAGTGCGTGCATTAGATCTGTATTGGCCCGCTGGCGTGTATTCCTTGTCCCATGTTGCGCTACC CTTTGGTGTGGATGATGGCCTCTATGGCGCGATCATTGAGCCTGATTCACATCGGATCCAAATCGGTGCCACGGCTTCAC GGGGAGAGCGCGGTTTGTATAGTGTGTCGGCATCGGAAATGTTGCGCCAGAAATGGAATCCCTTCTTCCCGTATCTACTT GAGCGCATGGATGAGTATCGACTCGCCCATATGCACTAG
Upstream 100 bases:
>100_bases TATGGCAATGGAACCATCGTGGTAAAAAGTTTGAAGGATGTTTTTATCTAACCGTATAATTGGCTTGCTCATTTTATCTT ATTGTTTTCTAGGAACAGCC
Downstream 100 bases:
>100_bases GATTTCGTGATTGATTAACCGCTCAGTGTCATAACGCTTGAGCTTTCATTGATGATCACGCTATGTAAATGTGCACTCAG AATCAAGCAGAGCCGTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MKAIIIGSTKHLFLAALYASIGIALALLATGIYFLNARPELSLWHTVELENEFHYNTKLANFNEYLALEERLFAEVERKV VQKIPANEFSPVNRYVKNSLSDPAHWPQNWNRSYEWPKADAEFGVLLLHGMSDSPYALSNVAAHFKDKAHVLGLRLPGHG TIPSGLTEVYWQDLAAAVNLATAHMRQSLKGKPLFVVGFSTGAAVALNHELERISQDKKPDYAGMIFISPAIGLAPLAAA ARWQSWIGRLLELDKLQWNSIQVEYDPFKYTSFAVNAGDVVYQLALRNQGLLAGLTLPQRAQIPSILTFQSVVDATVSTS AVVNHFYQTLPENGHELVLFDMNRLDVNAKMVSNDPLVGLLASINSPALHYRGTVVENISNETTQVQARSFGLAAQGKVV TEGNEQVRALDLYWPAGVYSLSHVALPFGVDDGLYGAIIEPDSHRIQIGATASRGERGLYSVSASEMLRQKWNPFFPYLL ERMDEYRLAHMH
Sequences:
>Translated_492_residues MKAIIIGSTKHLFLAALYASIGIALALLATGIYFLNARPELSLWHTVELENEFHYNTKLANFNEYLALEERLFAEVERKV VQKIPANEFSPVNRYVKNSLSDPAHWPQNWNRSYEWPKADAEFGVLLLHGMSDSPYALSNVAAHFKDKAHVLGLRLPGHG TIPSGLTEVYWQDLAAAVNLATAHMRQSLKGKPLFVVGFSTGAAVALNHELERISQDKKPDYAGMIFISPAIGLAPLAAA ARWQSWIGRLLELDKLQWNSIQVEYDPFKYTSFAVNAGDVVYQLALRNQGLLAGLTLPQRAQIPSILTFQSVVDATVSTS AVVNHFYQTLPENGHELVLFDMNRLDVNAKMVSNDPLVGLLASINSPALHYRGTVVENISNETTQVQARSFGLAAQGKVV TEGNEQVRALDLYWPAGVYSLSHVALPFGVDDGLYGAIIEPDSHRIQIGATASRGERGLYSVSASEMLRQKWNPFFPYLL ERMDEYRLAHMH >Mature_492_residues MKAIIIGSTKHLFLAALYASIGIALALLATGIYFLNARPELSLWHTVELENEFHYNTKLANFNEYLALEERLFAEVERKV VQKIPANEFSPVNRYVKNSLSDPAHWPQNWNRSYEWPKADAEFGVLLLHGMSDSPYALSNVAAHFKDKAHVLGLRLPGHG TIPSGLTEVYWQDLAAAVNLATAHMRQSLKGKPLFVVGFSTGAAVALNHELERISQDKKPDYAGMIFISPAIGLAPLAAA ARWQSWIGRLLELDKLQWNSIQVEYDPFKYTSFAVNAGDVVYQLALRNQGLLAGLTLPQRAQIPSILTFQSVVDATVSTS AVVNHFYQTLPENGHELVLFDMNRLDVNAKMVSNDPLVGLLASINSPALHYRGTVVENISNETTQVQARSFGLAAQGKVV TEGNEQVRALDLYWPAGVYSLSHVALPFGVDDGLYGAIIEPDSHRIQIGATASRGERGLYSVSASEMLRQKWNPFFPYLL ERMDEYRLAHMH
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54625; Mature: 54625
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIIIGSTKHLFLAALYASIGIALALLATGIYFLNARPELSLWHTVELENEFHYNTKLA CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCEEECCEEC NFNEYLALEERLFAEVERKVVQKIPANEFSPVNRYVKNSLSDPAHWPQNWNRSYEWPKAD CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AEFGVLLLHGMSDSPYALSNVAAHFKDKAHVLGLRLPGHGTIPSGLTEVYWQDLAAAVNL CCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH ATAHMRQSLKGKPLFVVGFSTGAAVALNHELERISQDKKPDYAGMIFISPAIGLAPLAAA HHHHHHHHCCCCCEEEEEECCCCEEEECHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHH ARWQSWIGRLLELDKLQWNSIQVEYDPFKYTSFAVNAGDVVYQLALRNQGLLAGLTLPQR HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCHHEEEEECCCCCEEEECCCCCC AQIPSILTFQSVVDATVSTSAVVNHFYQTLPENGHELVLFDMNRLDVNAKMVSNDPLVGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEECEEEEEECCCCHHHH LASINSPALHYRGTVVENISNETTQVQARSFGLAAQGKVVTEGNEQVRALDLYWPAGVYS HHHCCCCCEEECCHHHHCCCCCHHEEEHHHCCCEECCEEEECCCCCEEEEEEECCCCHHH LSHVALPFGVDDGLYGAIIEPDSHRIQIGATASRGERGLYSVSASEMLRQKWNPFFPYLL HHHEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEECHHHHHHHHCCCHHHHHH ERMDEYRLAHMH HHHHHHHHHCCC >Mature Secondary Structure MKAIIIGSTKHLFLAALYASIGIALALLATGIYFLNARPELSLWHTVELENEFHYNTKLA CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCEEECCEEC NFNEYLALEERLFAEVERKVVQKIPANEFSPVNRYVKNSLSDPAHWPQNWNRSYEWPKAD CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AEFGVLLLHGMSDSPYALSNVAAHFKDKAHVLGLRLPGHGTIPSGLTEVYWQDLAAAVNL CCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH ATAHMRQSLKGKPLFVVGFSTGAAVALNHELERISQDKKPDYAGMIFISPAIGLAPLAAA HHHHHHHHCCCCCEEEEEECCCCEEEECHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHH ARWQSWIGRLLELDKLQWNSIQVEYDPFKYTSFAVNAGDVVYQLALRNQGLLAGLTLPQR HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCHHEEEEECCCCCEEEECCCCCC AQIPSILTFQSVVDATVSTSAVVNHFYQTLPENGHELVLFDMNRLDVNAKMVSNDPLVGL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEECEEEEEECCCCHHHH LASINSPALHYRGTVVENISNETTQVQARSFGLAAQGKVVTEGNEQVRALDLYWPAGVYS HHHCCCCCEEECCHHHHCCCCCHHEEEHHHCCCEECCEEEECCCCCEEEEEEECCCCHHH LSHVALPFGVDDGLYGAIIEPDSHRIQIGATASRGERGLYSVSASEMLRQKWNPFFPYLL HHHEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEECHHHHHHHHCCCHHHHHH ERMDEYRLAHMH HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA