| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174745
Identifier: 126174745
GI number: 126174745
Start: 2960350
End: 2961222
Strand: Reverse
Name: 126174745
Synonym: Sbal_2532
Alternate gene names: NA
Gene position: 2961222-2960350 (Counterclockwise)
Preceding gene: 126174747
Following gene: 126174744
Centisome position: 57.75
GC content: 47.19
Gene sequence:
>873_bases ATGCAACTGTTTGTCAAAGATTTAACTGTGATCGATTTTTCCTATTTGTGCCCAAAGCGCGGCATGGTGGGAGAGAGTTG GATTGTCGATGTTCTGCTTGAGGGCGGATTAGACGAGCAAAACATGGTGCTCGATTTTGCTAAGGTGAAACGCACCATCA AGCAGACCATAGATGCGGTGGCCGATCATCGTTTACTCGTACCTACAGCGTGCAGCAGTGTGCGTTGGCAGCAACAGGGC GATAGAGTGTGGATGGATTTTGATAGCCAGTTAGGTGAAATCCATTTGGCCTGTCCTTCCCAAGCCTTTGCCTTAGTACC GACTGAACAAATTGATATTCCAAGCGTGAATGCTTTTTTACAGAAAGCGTTACGCGAAGCCTTACCTAAGAATGTCGAAG GGATCACGCTCACCTTGAGACATGAAATCCTCGATACGCCTTATTATCATTACAGCCATGGTTTACGTAAACATGATGGT AATTGCCAGCGTATCGCCCATGGACATCGTAGCCCAATTCATGTGTTTGAAAATGGCAGCCCAGCACCAAAGTGGGATGA GTATTGGGCCAAGCGCTGGCACGATATTTATTTAGGCAGTGAAGAGGATTTGGTTTCTGTTGACACCCTGAATTTATCGT CGCAAACGCGGATCACCGATGACAGTCATTATGGTTTCCATTACCAAGCGCCCCAAGGGGATTTCCAATTGGCGATGCCA AAGGAAGGCTGTGATTTAATTCCCCACGACACGACGGTTGAGTTGTTAGCCGACTATATTGCCACGACACTCGTCGCTAA AGTGCCCGGAAGTCAGTTTAAAGTGGTGGCATTTGAAGGTGTGGGTAAAGGCGCTATTGTGTCTAAGGGATAA
Upstream 100 bases:
>100_bases GAGTTTACTCGTTTTGGGTACTCAAGTTAGCACGCTCGGCCATCGCTAAGTGGTGCTTTCAAATTAAGTAGGTGGACTGT TTTTCTGCCGAGGAGCGTTA
Downstream 100 bases:
>100_bases GCGCTAAGTTTGGGTAAATAGAGTCGAGTAAATATAAATTACTTGCTGAAAGAGCCTCGGCAGATTGTCGGGGCTTTTTT GTGTCTTCATAACCTTAGAT
Product: isocitrate dehydrogenase (NADP(+))
Products: NA
Alternate protein names: 6-Pyruvoyl-Tetrahydropterin Synthase
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MQLFVKDLTVIDFSYLCPKRGMVGESWIVDVLLEGGLDEQNMVLDFAKVKRTIKQTIDAVADHRLLVPTACSSVRWQQQG DRVWMDFDSQLGEIHLACPSQAFALVPTEQIDIPSVNAFLQKALREALPKNVEGITLTLRHEILDTPYYHYSHGLRKHDG NCQRIAHGHRSPIHVFENGSPAPKWDEYWAKRWHDIYLGSEEDLVSVDTLNLSSQTRITDDSHYGFHYQAPQGDFQLAMP KEGCDLIPHDTTVELLADYIATTLVAKVPGSQFKVVAFEGVGKGAIVSKG
Sequences:
>Translated_290_residues MQLFVKDLTVIDFSYLCPKRGMVGESWIVDVLLEGGLDEQNMVLDFAKVKRTIKQTIDAVADHRLLVPTACSSVRWQQQG DRVWMDFDSQLGEIHLACPSQAFALVPTEQIDIPSVNAFLQKALREALPKNVEGITLTLRHEILDTPYYHYSHGLRKHDG NCQRIAHGHRSPIHVFENGSPAPKWDEYWAKRWHDIYLGSEEDLVSVDTLNLSSQTRITDDSHYGFHYQAPQGDFQLAMP KEGCDLIPHDTTVELLADYIATTLVAKVPGSQFKVVAFEGVGKGAIVSKG >Mature_290_residues MQLFVKDLTVIDFSYLCPKRGMVGESWIVDVLLEGGLDEQNMVLDFAKVKRTIKQTIDAVADHRLLVPTACSSVRWQQQG DRVWMDFDSQLGEIHLACPSQAFALVPTEQIDIPSVNAFLQKALREALPKNVEGITLTLRHEILDTPYYHYSHGLRKHDG NCQRIAHGHRSPIHVFENGSPAPKWDEYWAKRWHDIYLGSEEDLVSVDTLNLSSQTRITDDSHYGFHYQAPQGDFQLAMP KEGCDLIPHDTTVELLADYIATTLVAKVPGSQFKVVAFEGVGKGAIVSKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32570; Mature: 32570
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLFVKDLTVIDFSYLCPKRGMVGESWIVDVLLEGGLDEQNMVLDFAKVKRTIKQTIDAV CEEEEEHHHEEEHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ADHRLLVPTACSSVRWQQQGDRVWMDFDSQLGEIHLACPSQAFALVPTEQIDIPSVNAFL HCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHH QKALREALPKNVEGITLTLRHEILDTPYYHYSHGLRKHDGNCQRIAHGHRSPIHVFENGS HHHHHHHCCCCCCEEEEEEEEHHHCCCCHHHHCCCCCCCCCHHHHHCCCCCCEEEEECCC PAPKWDEYWAKRWHDIYLGSEEDLVSVDTLNLSSQTRITDDSHYGFHYQAPQGDFQLAMP CCCCHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCEECCCCCCCEEEECCCCCEEEECC KEGCDLIPHDTTVELLADYIATTLVAKVPGSQFKVVAFEGVGKGAIVSKG CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEECCC >Mature Secondary Structure MQLFVKDLTVIDFSYLCPKRGMVGESWIVDVLLEGGLDEQNMVLDFAKVKRTIKQTIDAV CEEEEEHHHEEEHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ADHRLLVPTACSSVRWQQQGDRVWMDFDSQLGEIHLACPSQAFALVPTEQIDIPSVNAFL HCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHH QKALREALPKNVEGITLTLRHEILDTPYYHYSHGLRKHDGNCQRIAHGHRSPIHVFENGS HHHHHHHCCCCCCEEEEEEEEHHHCCCCHHHHCCCCCCCCCHHHHHCCCCCCEEEEECCC PAPKWDEYWAKRWHDIYLGSEEDLVSVDTLNLSSQTRITDDSHYGFHYQAPQGDFQLAMP CCCCHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCEECCCCCCCEEEECCCCCEEEECC KEGCDLIPHDTTVELLADYIATTLVAKVPGSQFKVVAFEGVGKGAIVSKG CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA