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The map label for this gene is yafK [C]

Identifier: 126174741

GI number: 126174741

Start: 2956887

End: 2957453

Strand: Direct

Name: yafK [C]

Synonym: Sbal_2528

Alternate gene names: 126174741

Gene position: 2956887-2957453 (Clockwise)

Preceding gene: 126174738

Following gene: 126174742

Centisome position: 57.67

GC content: 47.62

Gene sequence:

>567_bases
TTGCGGTATGATGCCGAAAAAAGCCAACAACTAGTGTTAATTTTCGAGGACTTCATGCGCGCCACCCTACTTTCCACATT
GACCTCCCTCACTGTGACTATCGCGGCACTCGTTTCACCTGTATTACATGCCTCTGGCATGGGTAAAGTGGATCTTGTGG
TGATCACAAAATCCGAATCCAGTATGGCTTTATTGCGCGATGGCAAAATACTCAAACAATATCGCATTGCTATGGGTGAC
TTGCCAGCAGGACACAAATTAAAGGAAGGCGATCAGCGCACACCACAGGGGCGTTATACCTTAGATTATAAAAAGCCAGA
CAGTGCCTATTATAAATCGATCCATATTTCCTATCCCAACGAAGAAGATAAACTTAGAGCCAAAGCTTTAGGCATTAGAC
CCGGTGGCATGATCATGATCCACGGCCAGAACCCTAAGTCGCCGCTGCCGCCAGAACAAGCCCAGCAATACAACTGGACC
GACGGCTGTATCGCGATTACCAACGCCGAAATGGATGAAGTGTGGAAAGTCGTCGATGAAGGAACGCCGATTGAGATTTG
GCCGTAA

Upstream 100 bases:

>100_bases
GCAACAAACTAAGTAACACTGGGATTACACCATAAATATCCCACGAGTCTGCCATGCAATTGCACTCAGCTCAAAATTAT
CTACTCACAGCAGGATAAAA

Downstream 100 bases:

>100_bases
CCTTAGCCAACTTCCCGATGGCAACACGCCAAATAGATAATTGCACGATATCAAACACGCCCAGCTTAATGGGCGTTTTT
ATTTAACCATTTACATCATA

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRYDAEKSQQLVLIFEDFMRATLLSTLTSLTVTIAALVSPVLHASGMGKVDLVVITKSESSMALLRDGKILKQYRIAMGD
LPAGHKLKEGDQRTPQGRYTLDYKKPDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPKSPLPPEQAQQYNWT
DGCIAITNAEMDEVWKVVDEGTPIEIWP

Sequences:

>Translated_188_residues
MRYDAEKSQQLVLIFEDFMRATLLSTLTSLTVTIAALVSPVLHASGMGKVDLVVITKSESSMALLRDGKILKQYRIAMGD
LPAGHKLKEGDQRTPQGRYTLDYKKPDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPKSPLPPEQAQQYNWT
DGCIAITNAEMDEVWKVVDEGTPIEIWP
>Mature_188_residues
MRYDAEKSQQLVLIFEDFMRATLLSTLTSLTVTIAALVSPVLHASGMGKVDLVVITKSESSMALLRDGKILKQYRIAMGD
LPAGHKLKEGDQRTPQGRYTLDYKKPDSAYYKSIHISYPNEEDKLRAKALGIRPGGMIMIHGQNPKSPLPPEQAQQYNWT
DGCIAITNAEMDEVWKVVDEGTPIEIWP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21004; Mature: 21004

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYDAEKSQQLVLIFEDFMRATLLSTLTSLTVTIAALVSPVLHASGMGKVDLVVITKSES
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
SMALLRDGKILKQYRIAMGDLPAGHKLKEGDQRTPQGRYTLDYKKPDSAYYKSIHISYPN
CEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCC
EEDKLRAKALGIRPGGMIMIHGQNPKSPLPPEQAQQYNWTDGCIAITNAEMDEVWKVVDE
CHHHHHHHHEECCCCCEEEEECCCCCCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHCC
GTPIEIWP
CCCEEECC
>Mature Secondary Structure
MRYDAEKSQQLVLIFEDFMRATLLSTLTSLTVTIAALVSPVLHASGMGKVDLVVITKSES
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
SMALLRDGKILKQYRIAMGDLPAGHKLKEGDQRTPQGRYTLDYKKPDSAYYKSIHISYPN
CEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCC
EEDKLRAKALGIRPGGMIMIHGQNPKSPLPPEQAQQYNWTDGCIAITNAEMDEVWKVVDE
CHHHHHHHHEECCCCCEEEEECCCCCCCCCHHHHHCCCCCCCEEEEECCCHHHHHHHHCC
GTPIEIWP
CCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA