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The map label for this gene is rpfG [H]

Identifier: 126174717

GI number: 126174717

Start: 2927386

End: 2928648

Strand: Direct

Name: rpfG [H]

Synonym: Sbal_2504

Alternate gene names: 126174717

Gene position: 2927386-2928648 (Clockwise)

Preceding gene: 126174715

Following gene: 126174722

Centisome position: 57.09

GC content: 45.68

Gene sequence:

>1263_bases
ATGAAAAAAAGCTGTAAAGTCTCAGTCCATCAACTTCAAGTCGGCAACTTTGTGCGTTTGCCCGTGGCTTGGAAAGATCA
TCCCTTTTTATTCAGTAGCTTTCATATTAAACAAGCTGCGCAAATCGAGTTGATTAAAAATCTAGGCATCGAACATGTCA
TCGTCGATTTAGAGCGCAGTGACGTCGCCCCGATACATGCTGATGCGGTCAACCCAATCAAACTGCCACCGAGTGCTGAG
ATCAATGTGCTTAAAAACGACATGGATCAGTACAAGGCCGAACAAATCGAAGTGCAAAAGAAATTACGCCGCGACATTCA
TAAAACCGAGCAAAACTTTACCCGCTCGGTCGCCATGATGCGCAGCCTCATTTCTAAGCTGCGTAATCGCCCCTTAAATG
CGGTCGATGACGCTAAAGATTTGGTCCATACCATAGTCGAGCAGCTGCTCAACTCAGATAACTTAGTGCTGCACTTAATG
AGCGATGCTAAGCAAGATGAAAGCATTTACTACCATTCTTTGAACGTCGCGATTCTTTCTATGTTAATCGCCAAAGAACT
CGAATGGGATAGAAGTGAGATTGAAACAGTGGGTCTCAGTGCCCTATTCCACGACGTGGGTAAATTAAAAGTCCCGCCAC
AAATTCTTAAAAAATCGACCCCTTGGTCGGCGCCAGAGCTTAATTTCATCAAGCAGCATCCGTTACTTGGTATAGAACTG
CTCAAATTAGCCGATAATTTCCCCCAAGCGGCCTTAGCTCCCATCACCAATCACCACGAGTGTCTCGATGGCAGTGGTTA
TCCCAAAGGCTTAAAGGAAGAGGCGTTAGACAAAGTATCGCAACTGATTGCGGTAGTGAACGAATATGATTCCCTGTGTT
ACCCAAGCCAACAGGGCAAAGCCAGAATGCCCTATGCCGCTCTGGGGCATTTGTACAAGCAATACAAGACTAAGCTCAAT
CAAGAATATATTGGCAAGATGATCAAGATGTTAGGCATTTATCCTCCTGGCAGTGTGGTGGAATTATCCAGCGGTCAATA
TGCCATGGTGATGTCAGTTAACTTAAGCAAGCTGCTATGCCCTAAGATATTGGTTTACGATGCGTTAGTCCCTAAAGATC
AAGCGCCTATCGTTGATTTAGAGATTGAAGGGATCAGCATAGTGCGCTGCTTACCGCCTGCAGCGCTTCCCGAAAAAGTC
CACGAGTACCTGAATCCCCGCGAACGAGTAAGTTACTACTTTGGCGGCGATAGTCGTAAATAG

Upstream 100 bases:

>100_bases
CTACTTTCTAGGCTTACTATGCTGACATGTTAGTTAAGTAATTGTAAAGCAGCATCATTGAGATAAAATAACCCACATTA
GGCTTCACGATAACAAGAAT

Downstream 100 bases:

>100_bases
CTGATTAGTTAACCGGCATAGCGATTCATGCCTAACGGATTTCACGCATTTCATCAAAGTCATCGAGTCAAACTCGTTGG
TAAAAGTCATTGAATAAACG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKKSCKVSVHQLQVGNFVRLPVAWKDHPFLFSSFHIKQAAQIELIKNLGIEHVIVDLERSDVAPIHADAVNPIKLPPSAE
INVLKNDMDQYKAEQIEVQKKLRRDIHKTEQNFTRSVAMMRSLISKLRNRPLNAVDDAKDLVHTIVEQLLNSDNLVLHLM
SDAKQDESIYYHSLNVAILSMLIAKELEWDRSEIETVGLSALFHDVGKLKVPPQILKKSTPWSAPELNFIKQHPLLGIEL
LKLADNFPQAALAPITNHHECLDGSGYPKGLKEEALDKVSQLIAVVNEYDSLCYPSQQGKARMPYAALGHLYKQYKTKLN
QEYIGKMIKMLGIYPPGSVVELSSGQYAMVMSVNLSKLLCPKILVYDALVPKDQAPIVDLEIEGISIVRCLPPAALPEKV
HEYLNPRERVSYYFGGDSRK

Sequences:

>Translated_420_residues
MKKSCKVSVHQLQVGNFVRLPVAWKDHPFLFSSFHIKQAAQIELIKNLGIEHVIVDLERSDVAPIHADAVNPIKLPPSAE
INVLKNDMDQYKAEQIEVQKKLRRDIHKTEQNFTRSVAMMRSLISKLRNRPLNAVDDAKDLVHTIVEQLLNSDNLVLHLM
SDAKQDESIYYHSLNVAILSMLIAKELEWDRSEIETVGLSALFHDVGKLKVPPQILKKSTPWSAPELNFIKQHPLLGIEL
LKLADNFPQAALAPITNHHECLDGSGYPKGLKEEALDKVSQLIAVVNEYDSLCYPSQQGKARMPYAALGHLYKQYKTKLN
QEYIGKMIKMLGIYPPGSVVELSSGQYAMVMSVNLSKLLCPKILVYDALVPKDQAPIVDLEIEGISIVRCLPPAALPEKV
HEYLNPRERVSYYFGGDSRK
>Mature_420_residues
MKKSCKVSVHQLQVGNFVRLPVAWKDHPFLFSSFHIKQAAQIELIKNLGIEHVIVDLERSDVAPIHADAVNPIKLPPSAE
INVLKNDMDQYKAEQIEVQKKLRRDIHKTEQNFTRSVAMMRSLISKLRNRPLNAVDDAKDLVHTIVEQLLNSDNLVLHLM
SDAKQDESIYYHSLNVAILSMLIAKELEWDRSEIETVGLSALFHDVGKLKVPPQILKKSTPWSAPELNFIKQHPLLGIEL
LKLADNFPQAALAPITNHHECLDGSGYPKGLKEEALDKVSQLIAVVNEYDSLCYPSQQGKARMPYAALGHLYKQYKTKLN
QEYIGKMIKMLGIYPPGSVVELSSGQYAMVMSVNLSKLLCPKILVYDALVPKDQAPIVDLEIEGISIVRCLPPAALPEKV
HEYLNPRERVSYYFGGDSRK

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 47335; Mature: 47335

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSCKVSVHQLQVGNFVRLPVAWKDHPFLFSSFHIKQAAQIELIKNLGIEHVIVDLERS
CCCCCCEEHEEEECCCEEEECEEECCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEECCC
DVAPIHADAVNPIKLPPSAEINVLKNDMDQYKAEQIEVQKKLRRDIHKTEQNFTRSVAMM
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLISKLRNRPLNAVDDAKDLVHTIVEQLLNSDNLVLHLMSDAKQDESIYYHSLNVAILS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEHHHHHHHH
MLIAKELEWDRSEIETVGLSALFHDVGKLKVPPQILKKSTPWSAPELNFIKQHPLLGIEL
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHCCCHHHHH
LKLADNFPQAALAPITNHHECLDGSGYPKGLKEEALDKVSQLIAVVNEYDSLCYPSQQGK
HHHHCCCCCHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ARMPYAALGHLYKQYKTKLNQEYIGKMIKMLGIYPPGSVVELSSGQYAMVMSVNLSKLLC
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHH
PKILVYDALVPKDQAPIVDLEIEGISIVRCLPPAALPEKVHEYLNPRERVSYYFGGDSRK
HHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHCCHHHHEEEEECCCCCC
>Mature Secondary Structure
MKKSCKVSVHQLQVGNFVRLPVAWKDHPFLFSSFHIKQAAQIELIKNLGIEHVIVDLERS
CCCCCCEEHEEEECCCEEEECEEECCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEEECCC
DVAPIHADAVNPIKLPPSAEINVLKNDMDQYKAEQIEVQKKLRRDIHKTEQNFTRSVAMM
CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLISKLRNRPLNAVDDAKDLVHTIVEQLLNSDNLVLHLMSDAKQDESIYYHSLNVAILS
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEHHHHHHHH
MLIAKELEWDRSEIETVGLSALFHDVGKLKVPPQILKKSTPWSAPELNFIKQHPLLGIEL
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHCCCHHHHH
LKLADNFPQAALAPITNHHECLDGSGYPKGLKEEALDKVSQLIAVVNEYDSLCYPSQQGK
HHHHCCCCCHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ARMPYAALGHLYKQYKTKLNQEYIGKMIKMLGIYPPGSVVELSSGQYAMVMSVNLSKLLC
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCHHHHHH
PKILVYDALVPKDQAPIVDLEIEGISIVRCLPPAALPEKVHEYLNPRERVSYYFGGDSRK
HHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHCCHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]