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The map label for this gene is slyA [C]

Identifier: 126174698

GI number: 126174698

Start: 2898735

End: 2899151

Strand: Reverse

Name: slyA [C]

Synonym: Sbal_2485

Alternate gene names: 126174698

Gene position: 2899151-2898735 (Counterclockwise)

Preceding gene: 126174699

Following gene: 126174695

Centisome position: 56.54

GC content: 43.41

Gene sequence:

>417_bases
TTGAATCGTCATGAAAGCTTAGGCTATCTTGTTTCCCACTTAAATATCGAGCTGCAAAATGAGCTTGATCTGCATCTTAA
GCGATATCAACTCGATATAAAACTGTGGCCTGTGCTGTTTGCTTTGTGGCAAGAGGAGGGCATCAGCCAAACTGAATTGT
CTAAGCGTTGCGATGTGGCAAATTACACTATGACGCGTTTACTCGATCAGTTACAGGTACAAGGTCTTATTACCCGCCAT
CAAGAAGCCGATAATCGGCGCGCCTTTCAAATCTTTTTGACCGATGAAGCCAAAGCGTTAGAGCAAGATCTGATTTGCGA
AGCTGAGCGGGTCAACGAAAAATTCCTGTCTAACCTCAGTGATGAGGAGCAGCAGCAGTTCGTCTTACTATTAAATAAAA
TCAATCGCTTGGCTTAA

Upstream 100 bases:

>100_bases
TTGCGGGTTAAGTGGTAGTATTAAAACTGACTCTGTCTTCTTATAATGGCGCACAGGGTAAGTGAAAACGCGTTAAAACC
TTTGTTGTAGGAGGTGCTGT

Downstream 100 bases:

>100_bases
TGATACGGATTAATTCGGTATGGAGGGATACTGCGGTTTAGCCGTTTTCACTGCTATCTGTATGTGATTGTCTAAATTCA
TTTTCTCCAGTTTAATCCTA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein; MarR Family Protein; Regulatory Protein MarR; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MNRHESLGYLVSHLNIELQNELDLHLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVANYTMTRLLDQLQVQGLITRH
QEADNRRAFQIFLTDEAKALEQDLICEAERVNEKFLSNLSDEEQQQFVLLLNKINRLA

Sequences:

>Translated_138_residues
MNRHESLGYLVSHLNIELQNELDLHLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVANYTMTRLLDQLQVQGLITRH
QEADNRRAFQIFLTDEAKALEQDLICEAERVNEKFLSNLSDEEQQQFVLLLNKINRLA
>Mature_138_residues
MNRHESLGYLVSHLNIELQNELDLHLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVANYTMTRLLDQLQVQGLITRH
QEADNRRAFQIFLTDEAKALEQDLICEAERVNEKFLSNLSDEEQQQFVLLLNKINRLA

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16310; Mature: 16310

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRHESLGYLVSHLNIELQNELDLHLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVA
CCCCHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
NYTMTRLLDQLQVQGLITRHQEADNRRAFQIFLTDEAKALEQDLICEAERVNEKFLSNLS
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
DEEQQQFVLLLNKINRLA
CHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRHESLGYLVSHLNIELQNELDLHLKRYQLDIKLWPVLFALWQEEGISQTELSKRCDVA
CCCCHHHHHHHHHHCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
NYTMTRLLDQLQVQGLITRHQEADNRRAFQIFLTDEAKALEQDLICEAERVNEKFLSNLS
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
DEEQQQFVLLLNKINRLA
CHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA