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The map label for this gene is nudJ [H]

Identifier: 126174690

GI number: 126174690

Start: 2890923

End: 2891411

Strand: Direct

Name: nudJ [H]

Synonym: Sbal_2477

Alternate gene names: 126174690

Gene position: 2890923-2891411 (Clockwise)

Preceding gene: 126174689

Following gene: 126174691

Centisome position: 56.38

GC content: 48.26

Gene sequence:

>489_bases
ATGAGTCAACGATATAAACCCAATGTGACCGTCGCTTGTATTATTCATGCGACTTCACAGGACAAATATCTGATGGTAGA
AGAGTGGATTGATGGCGAGCAGCGCTTTAATCAGCCAGCGGGTCACTTAGAAGCAAATGAAAGCTTAATCCAAGCCTGTG
AGCGCGAAGTATATGAGGAAACGGGGTTATCACTTAACCCCCAAGGACTCGTCGGCATCTATCAATTTAGCGCCAGTGAA
GACTTAGCCTTTGTGCGCTTTACCTTCTTCGTGCAGTTAGATGATATGCCCTCACCTGCGCCGCAGGACAACGCTATCCA
CAGTGCGCACTGGCTGAGTTTTGCACAGATAGAAGCCAAGTCATCTTTACTGCGCAGCCCCTTAGTGCTCGATTGCCTAA
AAGACTATCTTAATAACGCACAACAGGGCCAAACTTATCCCCTCTCCTTACTCAATAGTGACCGCCTCGCGATAGCCCAA
GCGAGTTAG

Upstream 100 bases:

>100_bases
CATAAATGTATCCGTCTCGGTGATGAAGTCTAAATTTCAGCCAAGTTTCTGCGCTCAACGCCACTAAAAATTGGCACCAT
GTCCACTCAAAGGAGGCACT

Downstream 100 bases:

>100_bases
GCGTGATAGAATACCGCCCCGCATAAACTGCTTGTTAAACTTATGCATGTGCTAGTGCCTATCGGCCTCTACGTGGCTAA
ATAGTAGACTGTACAGTAGG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSQRYKPNVTVACIIHATSQDKYLMVEEWIDGEQRFNQPAGHLEANESLIQACEREVYEETGLSLNPQGLVGIYQFSASE
DLAFVRFTFFVQLDDMPSPAPQDNAIHSAHWLSFAQIEAKSSLLRSPLVLDCLKDYLNNAQQGQTYPLSLLNSDRLAIAQ
AS

Sequences:

>Translated_162_residues
MSQRYKPNVTVACIIHATSQDKYLMVEEWIDGEQRFNQPAGHLEANESLIQACEREVYEETGLSLNPQGLVGIYQFSASE
DLAFVRFTFFVQLDDMPSPAPQDNAIHSAHWLSFAQIEAKSSLLRSPLVLDCLKDYLNNAQQGQTYPLSLLNSDRLAIAQ
AS
>Mature_161_residues
SQRYKPNVTVACIIHATSQDKYLMVEEWIDGEQRFNQPAGHLEANESLIQACEREVYEETGLSLNPQGLVGIYQFSASED
LAFVRFTFFVQLDDMPSPAPQDNAIHSAHWLSFAQIEAKSSLLRSPLVLDCLKDYLNNAQQGQTYPLSLLNSDRLAIAQA
S

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=148, Percent_Identity=43.2432432432432, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 18181; Mature: 18049

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRYKPNVTVACIIHATSQDKYLMVEEWIDGEQRFNQPAGHLEANESLIQACEREVYEE
CCCCCCCCEEEEEEEEECCCCCEEEHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH
TGLSLNPQGLVGIYQFSASEDLAFVRFTFFVQLDDMPSPAPQDNAIHSAHWLSFAQIEAK
CCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
SSLLRSPLVLDCLKDYLNNAQQGQTYPLSLLNSDRLAIAQAS
HHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECC
>Mature Secondary Structure 
SQRYKPNVTVACIIHATSQDKYLMVEEWIDGEQRFNQPAGHLEANESLIQACEREVYEE
CCCCCCCEEEEEEEEECCCCCEEEHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHH
TGLSLNPQGLVGIYQFSASEDLAFVRFTFFVQLDDMPSPAPQDNAIHSAHWLSFAQIEAK
CCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
SSLLRSPLVLDCLKDYLNNAQQGQTYPLSLLNSDRLAIAQAS
HHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA