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The map label for this gene is ycfJ [C]

Identifier: 126174681

GI number: 126174681

Start: 2881805

End: 2882275

Strand: Reverse

Name: ycfJ [C]

Synonym: Sbal_2468

Alternate gene names: 126174681

Gene position: 2882275-2881805 (Counterclockwise)

Preceding gene: 126174685

Following gene: 126174680

Centisome position: 56.21

GC content: 48.83

Gene sequence:

>471_bases
ATGTGGAAACCTACTCTAGCAAGCTTTATGTTTATTTTTGCGTTTATCCTCAGCCCCGCGAGTGCGGGTTATGACCGTAA
TCAAGCCGTGCCTGTCGAGAAAGTGCTCTATGGCGATATCACTTCGGTACGTAATATCACTGAAACCCAGCTGATTGAAG
ACCGTAATCGAGGTTGGAAAACCTTTGGTGGCGCCTTAGCAGGTGGGGTGATTGGTAATCAGTTTGGTGGCGGTTCTGGC
CGTGATGTGGCGACCATTTTAGGTGCCTTGATTGGTGGCAGTGTCGGTAATCGATATGGCAGTGGCACGAGCGTGCAGTC
ATTGAAGCTGGTGGAATTGATGATCAATCAAGAAGATGGCACCCAAGTTATGGTGATCCAATACTATGATGCTGGCATGG
TATTCAATGCGGGTGACAGAGTACGTGTCGTCTACCTACAAGGTGGTGTGCGTGTTGATGTCGCGATGTAA

Upstream 100 bases:

>100_bases
AAGGAAAAGCTTCAAATTCGTGATTCAGAAAAGACAGTGACTTCACAATTGAGTATGATTTAGTTATAGACCTTATTATT
AAGTTAGCGGAAATTCAGAT

Downstream 100 bases:

>100_bases
GCGACTGTCTTATCTTGATTAAGTCGTCATCTTCAGTAAATGGTCATCTCGAGTAAAGGACGGTAATGCAATGACACGGA
CAGAATTAACTCAATATTTA

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Lipoprotein; Surface Antigen

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MWKPTLASFMFIFAFILSPASAGYDRNQAVPVEKVLYGDITSVRNITETQLIEDRNRGWKTFGGALAGGVIGNQFGGGSG
RDVATILGALIGGSVGNRYGSGTSVQSLKLVELMINQEDGTQVMVIQYYDAGMVFNAGDRVRVVYLQGGVRVDVAM

Sequences:

>Translated_156_residues
MWKPTLASFMFIFAFILSPASAGYDRNQAVPVEKVLYGDITSVRNITETQLIEDRNRGWKTFGGALAGGVIGNQFGGGSG
RDVATILGALIGGSVGNRYGSGTSVQSLKLVELMINQEDGTQVMVIQYYDAGMVFNAGDRVRVVYLQGGVRVDVAM
>Mature_156_residues
MWKPTLASFMFIFAFILSPASAGYDRNQAVPVEKVLYGDITSVRNITETQLIEDRNRGWKTFGGALAGGVIGNQFGGGSG
RDVATILGALIGGSVGNRYGSGTSVQSLKLVELMINQEDGTQVMVIQYYDAGMVFNAGDRVRVVYLQGGVRVDVAM

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787353, Length=72, Percent_Identity=47.2222222222222, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16705; Mature: 16705

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKPTLASFMFIFAFILSPASAGYDRNQAVPVEKVLYGDITSVRNITETQLIEDRNRGWK
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHCCHHHHHHHHCCCCCH
TFGGALAGGVIGNQFGGGSGRDVATILGALIGGSVGNRYGSGTSVQSLKLVELMINQEDG
HHCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEEEECCCCC
TQVMVIQYYDAGMVFNAGDRVRVVYLQGGVRVDVAM
CEEEEEEEECCCEEECCCCEEEEEEEECCEEEEEEC
>Mature Secondary Structure
MWKPTLASFMFIFAFILSPASAGYDRNQAVPVEKVLYGDITSVRNITETQLIEDRNRGWK
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHCCHHHHHHHHCCCCCH
TFGGALAGGVIGNQFGGGSGRDVATILGALIGGSVGNRYGSGTSVQSLKLVELMINQEDG
HHCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEEEECCCCC
TQVMVIQYYDAGMVFNAGDRVRVVYLQGGVRVDVAM
CEEEEEEEECCCEEECCCCEEEEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA