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The map label for this gene is yebR [H]

Identifier: 126174662

GI number: 126174662

Start: 2861943

End: 2862401

Strand: Reverse

Name: yebR [H]

Synonym: Sbal_2449

Alternate gene names: 126174662

Gene position: 2862401-2861943 (Counterclockwise)

Preceding gene: 126174663

Following gene: 126174661

Centisome position: 55.83

GC content: 44.23

Gene sequence:

>459_bases
ATGAAATCGAAATTTTATGAGTCACTTAACCGTCAAGCCTTGGCCTTATTGGAAGGGGAAGACGACCTTGTTGCGGCAAT
GGCGAATTTTTCAACCTTACTCAATGATAATTTAACTGAGCTGAACTGGGTGGGATTCTACGTTATGCGTGGCGAACAAC
TCGTATTAGGCCCATTTCAAGGTAAAGTGGCTTGTACACGTATTCCGTTAGGAAAAGGCGTGTGTGGTACGGCGGCATTC
ACCAATCAAACCCAGCGAGTGGCCGATGTTCATCAATTTGATGGCCATATTGCCTGTGATTCTGCCAGTAATTCTGAAAT
CGTTGTGCCAGTTTGTGCTCAAGGTAACGTGGTTGCCGTGCTCGATATTGACAGCCCAATCTTCGATCGTTTCGATGAAG
ATGACCAAAAGGGGCTGGAATTACTGGTTAAAAGTTTTGAAAACTGCCTATTTGATTAA

Upstream 100 bases:

>100_bases
AAGGTGTCGTTCAGGTTAATAGTACGCCAACGAATCCACCTGCTGCGAAAAAAGCGGCTAAAAAGACCGAAGCAGCAGAA
TAAAATTGTTAGGAAATGTA

Downstream 100 bases:

>100_bases
TTTGCGTACAATAACGCATAATTCATAGTCGCAATCGGTGGCGTGCGCCTTATAATATGCGCCTGCACGCATTAAGCTGG
TTTGATTGGCATGCAATGAA

Product: putative GAF sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKSKFYESLNRQALALLEGEDDLVAAMANFSTLLNDNLTELNWVGFYVMRGEQLVLGPFQGKVACTRIPLGKGVCGTAAF
TNQTQRVADVHQFDGHIACDSASNSEIVVPVCAQGNVVAVLDIDSPIFDRFDEDDQKGLELLVKSFENCLFD

Sequences:

>Translated_152_residues
MKSKFYESLNRQALALLEGEDDLVAAMANFSTLLNDNLTELNWVGFYVMRGEQLVLGPFQGKVACTRIPLGKGVCGTAAF
TNQTQRVADVHQFDGHIACDSASNSEIVVPVCAQGNVVAVLDIDSPIFDRFDEDDQKGLELLVKSFENCLFD
>Mature_152_residues
MKSKFYESLNRQALALLEGEDDLVAAMANFSTLLNDNLTELNWVGFYVMRGEQLVLGPFQGKVACTRIPLGKGVCGTAAF
TNQTQRVADVHQFDGHIACDSASNSEIVVPVCAQGNVVAVLDIDSPIFDRFDEDDQKGLELLVKSFENCLFD

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=149, Percent_Identity=55.7046979865772, Blast_Score=185, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6322781, Length=159, Percent_Identity=43.3962264150943, Blast_Score=120, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 16666; Mature: 16666

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKFYESLNRQALALLEGEDDLVAAMANFSTLLNDNLTELNWVGFYVMRGEQLVLGPFQ
CCCHHHHHHCHHEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEECCC
GKVACTRIPLGKGVCGTAAFTNQTQRVADVHQFDGHIACDSASNSEIVVPVCAQGNVVAV
CCEEEEEECCCCCCCCCHHHCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCEEEE
LDIDSPIFDRFDEDDQKGLELLVKSFENCLFD
EECCCHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSKFYESLNRQALALLEGEDDLVAAMANFSTLLNDNLTELNWVGFYVMRGEQLVLGPFQ
CCCHHHHHHCHHEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEECCC
GKVACTRIPLGKGVCGTAAFTNQTQRVADVHQFDGHIACDSASNSEIVVPVCAQGNVVAV
CCEEEEEECCCCCCCCCHHHCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCEEEE
LDIDSPIFDRFDEDDQKGLELLVKSFENCLFD
EECCCHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]