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The map label for this gene is iscR [H]

Identifier: 126174611

GI number: 126174611

Start: 2787747

End: 2788208

Strand: Reverse

Name: iscR [H]

Synonym: Sbal_2398

Alternate gene names: 126174611

Gene position: 2788208-2787747 (Counterclockwise)

Preceding gene: 126174612

Following gene: 126174610

Centisome position: 54.38

GC content: 45.24

Gene sequence:

>462_bases
ATGAAACTTACATCAAAAGGTCGTTATGCAGTAACCGCTATGCTAGATGTGGCCATCCACTCAGCATCGGGACCAGTTCC
CTTAGCGGACATCTCTGAGAGACAAGGGATTTCGCTTTCCTATCTGGAACAACTCTTCGCTAAGCTAAGAAAACACGGTT
TAGTTGCCAGTGTACGTGGACCGGGCGGTGGTTATCGCTTAGGCCTAGAAGCTAATGATATTTCAGTCGGCATGGTTGTC
CATGCTGTAGACGAGTCTGTCGATGCGACTCGTTGCCAAGGACTTGGCAATTGTCAGAGTGGAACTCGCTGCTTAACCCA
TTCACTTTGGGGCGATTTAAGCAAACAAATTTCAGATTTTTTAGATGGTATCAGTCTTGCTGGCTTGATGCAGAAACGAG
ATGTGCAATTTATCTCGCTTAAGCAAGACACTATGCAAAAGGAACAAAGAGTCAGTTTATAA

Upstream 100 bases:

>100_bases
TGCACACTCAATACTTGAGTGTTTTAGTAGGTTTTAATACTTGACTGATTTACTCGGGTATGTTGAAATAAAGCATACCT
CTTCGGGAGCTATGGTAGTT

Downstream 100 bases:

>100_bases
CTGAACTTTGTTATACGATAAAAATAATTTTTGTACGTTGTATGTAGCCTCGGCAGAGACTGCTCAGTACGGAGTGTGTT
ATGAAGCTTCCTATCTATTT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKLTSKGRYAVTAMLDVAIHSASGPVPLADISERQGISLSYLEQLFAKLRKHGLVASVRGPGGGYRLGLEANDISVGMVV
HAVDESVDATRCQGLGNCQSGTRCLTHSLWGDLSKQISDFLDGISLAGLMQKRDVQFISLKQDTMQKEQRVSL

Sequences:

>Translated_153_residues
MKLTSKGRYAVTAMLDVAIHSASGPVPLADISERQGISLSYLEQLFAKLRKHGLVASVRGPGGGYRLGLEANDISVGMVV
HAVDESVDATRCQGLGNCQSGTRCLTHSLWGDLSKQISDFLDGISLAGLMQKRDVQFISLKQDTMQKEQRVSL
>Mature_153_residues
MKLTSKGRYAVTAMLDVAIHSASGPVPLADISERQGISLSYLEQLFAKLRKHGLVASVRGPGGGYRLGLEANDISVGMVV
HAVDESVDATRCQGLGNCQSGTRCLTHSLWGDLSKQISDFLDGISLAGLMQKRDVQFISLKQDTMQKEQRVSL

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=144, Percent_Identity=68.0555555555556, Blast_Score=183, Evalue=5e-48,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16504; Mature: 16504

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTSKGRYAVTAMLDVAIHSASGPVPLADISERQGISLSYLEQLFAKLRKHGLVASVRG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC
PGGGYRLGLEANDISVGMVVHAVDESVDATRCQGLGNCQSGTRCLTHSLWGDLSKQISDF
CCCCEEEECCCCCCEEHHEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LDGISLAGLMQKRDVQFISLKQDTMQKEQRVSL
HHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCC
>Mature Secondary Structure
MKLTSKGRYAVTAMLDVAIHSASGPVPLADISERQGISLSYLEQLFAKLRKHGLVASVRG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEC
PGGGYRLGLEANDISVGMVVHAVDESVDATRCQGLGNCQSGTRCLTHSLWGDLSKQISDF
CCCCEEEECCCCCCEEHHEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LDGISLAGLMQKRDVQFISLKQDTMQKEQRVSL
HHHHHHHHHHHHCCCCEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA