| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yfiK [C]
Identifier: 126174595
GI number: 126174595
Start: 2770874
End: 2771536
Strand: Reverse
Name: yfiK [C]
Synonym: Sbal_2382
Alternate gene names: 126174595
Gene position: 2771536-2770874 (Counterclockwise)
Preceding gene: 126174597
Following gene: 126174594
Centisome position: 54.05
GC content: 46.15
Gene sequence:
>663_bases ATGTCAATAAATGTATGCATACAATTTAAGGTGAATATGAATACCTCACTACTTTACGATCCACAATTATGGACTTTGAT GGCCTCGACTGCGCTGTTTTGCGCCACTATGTCTATGACGCCCGGACCAAACAATGTGCTATTGGCCAGTTCCGGTGCGC ATTTTGGTGTGATGCGCACTGTGCCGCACATTGCAGGGATCCGCTTGGGTTCGACTTCTTTACACCTTGCGGTGTTATTT GGGCTTGGAACCTTGTTTGAAGCATTACCGGTATTGCACCAAGTTTTGAAATATTTCGCTTTGGCGTATTTGCTGTATCT CGCGTACAAATTAGTGACGTCGCCAGTGCAGAGCACGCATCTTGATGACGGCCGAAAACCTATGACCCTGATTGAGGCCG CCTTATTCCAATGGATTAACCCTAAGTCTTGGATGTCGACAATTACCCTGTGCAGCGCATTCACATTAGGCGGCGATGGC TTTTGGCTCAGTGCCTTTCTTGGGGTATTAACCTTTAACGTAGTGGGATTTCCGGCGTCATTTACTTGGGTGTTTGTCGG TGCGGCGATCAGTAAGAAACTCAATACGGATAGACGTAAGCGTCATTTTAATTGGTTTATGGGCAGTTTACTTTTAGTGT CACTGCCGATGATATTGCGCTAA
Upstream 100 bases:
>100_bases GGGCCTGAAAAAGCTGTTAGGTCTGGCGTCCAGATTGTACTCATGACAATAAATCCATTGATCTCTAATATTCTCCGTAT ATTATTTATTGCATCTTTTT
Downstream 100 bases:
>100_bases CTTAGTGTTTATTCAGCGCCTAACTCCATAAATATTCTGAGGAAAATACTCGCGTAATGATTGGCTTTATGCCATAACCA ACATACTATTGCTGGCTTTT
Product: lysine exporter protein LysE/YggA
Products: NA
Alternate protein names: Lysine Exporter Protein; Amino Acid Transporter LysE; Transporter LysE Family; Threonine Efflux Protein; Translocator Protein LysE Family; LysE Family Protein; Amino Acid Efflux Protein; Transporter Protein; RhtB Family Transporter; Amino Acid Efflux Protein LysE Family; Transporter LysE Family Protein; LysE Family Transporter; Transmembrane Transporter Protein; Amino Acid Efflux Pump RhtB Family Protein; ABC Transporter; LysE/RhtB Family Efflux Protein; LysE-Type Translocator; LysE Type Translocator Family; LOW QUALITY PROTEIN Lysine Exporter Protein LysE; LysE Type Translocator Family Protein; RhtB Family Protein; Neutral Amino-Acid Efflux System; Transporter-LysE Family; Transmembrane Transporter Protein LysE Type Translocator; Lysing Exporter Protein
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSINVCIQFKVNMNTSLLYDPQLWTLMASTALFCATMSMTPGPNNVLLASSGAHFGVMRTVPHIAGIRLGSTSLHLAVLF GLGTLFEALPVLHQVLKYFALAYLLYLAYKLVTSPVQSTHLDDGRKPMTLIEAALFQWINPKSWMSTITLCSAFTLGGDG FWLSAFLGVLTFNVVGFPASFTWVFVGAAISKKLNTDRRKRHFNWFMGSLLLVSLPMILR
Sequences:
>Translated_220_residues MSINVCIQFKVNMNTSLLYDPQLWTLMASTALFCATMSMTPGPNNVLLASSGAHFGVMRTVPHIAGIRLGSTSLHLAVLF GLGTLFEALPVLHQVLKYFALAYLLYLAYKLVTSPVQSTHLDDGRKPMTLIEAALFQWINPKSWMSTITLCSAFTLGGDG FWLSAFLGVLTFNVVGFPASFTWVFVGAAISKKLNTDRRKRHFNWFMGSLLLVSLPMILR >Mature_219_residues SINVCIQFKVNMNTSLLYDPQLWTLMASTALFCATMSMTPGPNNVLLASSGAHFGVMRTVPHIAGIRLGSTSLHLAVLFG LGTLFEALPVLHQVLKYFALAYLLYLAYKLVTSPVQSTHLDDGRKPMTLIEAALFQWINPKSWMSTITLCSAFTLGGDGF WLSAFLGVLTFNVVGFPASFTWVFVGAAISKKLNTDRRKRHFNWFMGSLLLVSLPMILR
Specific function: Unknown
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24328; Mature: 24197
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINVCIQFKVNMNTSLLYDPQLWTLMASTALFCATMSMTPGPNNVLLASSGAHFGVMRT CCEEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHH VPHIAGIRLGSTSLHLAVLFGLGTLFEALPVLHQVLKYFALAYLLYLAYKLVTSPVQSTH HHHHHCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC LDDGRKPMTLIEAALFQWINPKSWMSTITLCSAFTLGGDGFWLSAFLGVLTFNVVGFPAS CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCH FTWVFVGAAISKKLNTDRRKRHFNWFMGSLLLVSLPMILR HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SINVCIQFKVNMNTSLLYDPQLWTLMASTALFCATMSMTPGPNNVLLASSGAHFGVMRT CEEEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHH VPHIAGIRLGSTSLHLAVLFGLGTLFEALPVLHQVLKYFALAYLLYLAYKLVTSPVQSTH HHHHHCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC LDDGRKPMTLIEAALFQWINPKSWMSTITLCSAFTLGGDGFWLSAFLGVLTFNVVGFPAS CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCH FTWVFVGAAISKKLNTDRRKRHFNWFMGSLLLVSLPMILR HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA