| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yceA [C]
Identifier: 126174591
GI number: 126174591
Start: 2766277
End: 2767281
Strand: Reverse
Name: yceA [C]
Synonym: Sbal_2378
Alternate gene names: 126174591
Gene position: 2767281-2766277 (Counterclockwise)
Preceding gene: 126174594
Following gene: 126174590
Centisome position: 53.97
GC content: 45.07
Gene sequence:
>1005_bases ATGACTAAAGTCGTCGTGTGTGCGTTATATAAATTCGTGTCTTTACCGCATTTTGAATCTATCCGAGCGCCACTGCTCGC CATGATGGAACAGGCCGAGATCAAAGGCACTCTGCTCCTCGCAAGCGAAGGGATTAATGGCACAGTTGCCGGCACTCAAG AAGCGATCGAAGCATTATTGGTTTGGCTTAATAGCCAAAATGGCCTAGACAATATTGTTCACAAATTGTCATTCGACGAT GAAATGCCGTTCTACCGCACTAAAGTCAAACTGAAAAACGAAATCGTCACTATGGGCGTTGAAGGCATTGATCCACTTAA AGTGGTTGGTACCTATGTTAAGCCTCAAGATTGGAATGCGCTGATTTCTGATCCTGACGTGATTTTAGTCGACACCCGTA ATGACTATGAAGTGCAAATCGGCACTTTTAAAAATGCTGTTAACCCTGTGACTGAAACCTTCAGAGAATTCCCTGAATAT GTGAAGCAGAATCTTGATCCTGCTAAACATAAAAAGGTTGCCATGTTCTGTACTGGTGGTATTCGCTGTGAGAAATCAAC CGCGTATTTGAAAGAGCAAGGCTTTGACGAGGTGTATCATCTCGAAGGCGGCATCCTTAAATACCTTGAAGAAGTCAAAG CAGAAGAAAGTCTGTGGGAAGGCGAGTGCTTCGTGTTCGATAACCGCGTCGCGGTTAACCATGACTTGAAGAAAGGTCAA TACGATCAATGTAATGCTTGCCGCATGCCAATCACTGAAGTTGAAAAACAGAGTCCTGCCTATGTGCAAGGTGTCAGTTG TCCACATTGTATCGATAAAATTTCTGACGAGCAGCGTAAACGTTTTGTTGAGCGTGAGCGCCAAGTGAATCTGGCAAAAG CCCGTAACGAAGCGCATATCGGCAGCGATGTGAATCAAGTGATTGAAGCACGCCGCGAGAAAAAAGAAGCGCAGCGTCGA CTCGCCGCCGAGAAAAATAACGCGAAAAAATCGCAAGTGCTTTAA
Upstream 100 bases:
>100_bases CAGGTAGAATTCCGCGCTATTTTGGGATCTGTAGCCAGTCTACAGCTGATTGATTTGTTTATGCACTGGAAATTAAGTTC CAGCCAGCAAAGAGGGTGTT
Downstream 100 bases:
>100_bases CTTTATATTTCATTGGATTAGCTGTAAGTTAATCATGAGTTCGCACTGAGTTCGTTTCTCGCTCAGGCAGCTCATACATT GCTCTCGATTTGAATATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTKVVVCALYKFVSLPHFESIRAPLLAMMEQAEIKGTLLLASEGINGTVAGTQEAIEALLVWLNSQNGLDNIVHKLSFDD EMPFYRTKVKLKNEIVTMGVEGIDPLKVVGTYVKPQDWNALISDPDVILVDTRNDYEVQIGTFKNAVNPVTETFREFPEY VKQNLDPAKHKKVAMFCTGGIRCEKSTAYLKEQGFDEVYHLEGGILKYLEEVKAEESLWEGECFVFDNRVAVNHDLKKGQ YDQCNACRMPITEVEKQSPAYVQGVSCPHCIDKISDEQRKRFVERERQVNLAKARNEAHIGSDVNQVIEARREKKEAQRR LAAEKNNAKKSQVL
Sequences:
>Translated_334_residues MTKVVVCALYKFVSLPHFESIRAPLLAMMEQAEIKGTLLLASEGINGTVAGTQEAIEALLVWLNSQNGLDNIVHKLSFDD EMPFYRTKVKLKNEIVTMGVEGIDPLKVVGTYVKPQDWNALISDPDVILVDTRNDYEVQIGTFKNAVNPVTETFREFPEY VKQNLDPAKHKKVAMFCTGGIRCEKSTAYLKEQGFDEVYHLEGGILKYLEEVKAEESLWEGECFVFDNRVAVNHDLKKGQ YDQCNACRMPITEVEKQSPAYVQGVSCPHCIDKISDEQRKRFVERERQVNLAKARNEAHIGSDVNQVIEARREKKEAQRR LAAEKNNAKKSQVL >Mature_333_residues TKVVVCALYKFVSLPHFESIRAPLLAMMEQAEIKGTLLLASEGINGTVAGTQEAIEALLVWLNSQNGLDNIVHKLSFDDE MPFYRTKVKLKNEIVTMGVEGIDPLKVVGTYVKPQDWNALISDPDVILVDTRNDYEVQIGTFKNAVNPVTETFREFPEYV KQNLDPAKHKKVAMFCTGGIRCEKSTAYLKEQGFDEVYHLEGGILKYLEEVKAEESLWEGECFVFDNRVAVNHDLKKGQY DQCNACRMPITEVEKQSPAYVQGVSCPHCIDKISDEQRKRFVERERQVNLAKARNEAHIGSDVNQVIEARREKKEAQRRL AAEKNNAKKSQVL
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI111038120, Length=250, Percent_Identity=34.4, Blast_Score=133, Evalue=2e-31, Organism=Escherichia coli, GI1787294, Length=305, Percent_Identity=30.1639344262295, Blast_Score=143, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR020936 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 37870; Mature: 37739
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVVVCALYKFVSLPHFESIRAPLLAMMEQAEIKGTLLLASEGINGTVAGTQEAIEALL CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHH VWLNSQNGLDNIVHKLSFDDEMPFYRTKVKLKNEIVTMGVEGIDPLKVVGTYVKPQDWNA HHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCCCCE LISDPDVILVDTRNDYEVQIGTFKNAVNPVTETFREFPEYVKQNLDPAKHKKVAMFCTGG EECCCCEEEEECCCCCEEEEECHHHHCCHHHHHHHHHHHHHHHCCCHHHCCEEEEEEECC IRCEKSTAYLKEQGFDEVYHLEGGILKYLEEVKAEESLWEGECFVFDNRVAVNHDLKKGQ EEECCHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCCCCC YDQCNACRMPITEVEKQSPAYVQGVSCPHCIDKISDEQRKRFVERERQVNLAKARNEAHI CCCCCCCCCCHHHHHCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHC GSDVNQVIEARREKKEAQRRLAAEKNNAKKSQVL CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure TKVVVCALYKFVSLPHFESIRAPLLAMMEQAEIKGTLLLASEGINGTVAGTQEAIEALL CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHH VWLNSQNGLDNIVHKLSFDDEMPFYRTKVKLKNEIVTMGVEGIDPLKVVGTYVKPQDWNA HHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCCCCE LISDPDVILVDTRNDYEVQIGTFKNAVNPVTETFREFPEYVKQNLDPAKHKKVAMFCTGG EECCCCEEEEECCCCCEEEEECHHHHCCHHHHHHHHHHHHHHHCCCHHHCCEEEEEEECC IRCEKSTAYLKEQGFDEVYHLEGGILKYLEEVKAEESLWEGECFVFDNRVAVNHDLKKGQ EEECCHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECEEEECCCCCCCC YDQCNACRMPITEVEKQSPAYVQGVSCPHCIDKISDEQRKRFVERERQVNLAKARNEAHI CCCCCCCCCCHHHHHCCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHC GSDVNQVIEARREKKEAQRRLAAEKNNAKKSQVL CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA