| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174581
Identifier: 126174581
GI number: 126174581
Start: 2757168
End: 2757881
Strand: Direct
Name: 126174581
Synonym: Sbal_2368
Alternate gene names: NA
Gene position: 2757168-2757881 (Clockwise)
Preceding gene: 126174580
Following gene: 126174582
Centisome position: 53.77
GC content: 50.84
Gene sequence:
>714_bases GTGCTAACACACCTCGAGATCCGCCCCGAAACCGCAAAGCTTTACGGCTTAAGCTCTCCTGAATTGGTGGAATATTTAAG TCCGTATCACCTTGGATATCATAGCTTTTGGATCGAAGTGAACACCGCCATCGCCTTTAATGCGATGGCGGAAAAAGCCA AAGATGCGGGCATAGCACTCGCCATCTGCTCTGCCCACCGCCCTTTTGAGCGACAACTGGCGATTTGGAATGCCAAGGCC AGCGGTAAACGCGCGGTATTGGATGCCAACGAGCAAGCGGTAAGTATTAAGGGATTGAGTGACGATGCCATCGTCGACTT GATTTTGCTCTGGTCGGCGCTGCCCGGCGCTTCACGTCACCACTGGGGCACAGATCTCGATGTGTTCGATGCGAATCAAA TTGATGTCAAAGCCCTGCGCCTTGTTGAAGCTGAATATGTCCAAGCTGGCCCCTGCGCCAAACTGCATGCTTGGCTAGTG GAGAATGCCCATGATTTTGGCTTTTATTTCCCGTTTCAACAGGGACAAAGCGCGGTCAGTCCTGAGCCTTGGCACATCAG CTATTTCCCTGTTGCGCAATTATTGTTGCCGCAATTCGATCGTGCCGAACTGGCAACCTTGTTAGAAAACAGTGATATGT TGCTCAAAGATGCGGTACTCGCACGATTAGACTATCTAGTGGATGAATACGTATTGCGTATCGCTCAGCCTTAG
Upstream 100 bases:
>100_bases GCCCAGTGAACGCCACCATTCATAAAGTGAATGAATGCGTTAAAGTGGACGACCTTGAGCAGCTAGCCCTGTGCTATGAA GTGATTTTGGAACAACTATT
Downstream 100 bases:
>100_bases CTGTGGAATAATAGCCGCAGATTTTTGTAAAGGTTAAGCCCAGCGCTCTATCGCCAAAATGGGCGCCAAAATACGGCTTA ACATAATGATATATTTAATT
Product: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MLTHLEIRPETAKLYGLSSPELVEYLSPYHLGYHSFWIEVNTAIAFNAMAEKAKDAGIALAICSAHRPFERQLAIWNAKA SGKRAVLDANEQAVSIKGLSDDAIVDLILLWSALPGASRHHWGTDLDVFDANQIDVKALRLVEAEYVQAGPCAKLHAWLV ENAHDFGFYFPFQQGQSAVSPEPWHISYFPVAQLLLPQFDRAELATLLENSDMLLKDAVLARLDYLVDEYVLRIAQP
Sequences:
>Translated_237_residues MLTHLEIRPETAKLYGLSSPELVEYLSPYHLGYHSFWIEVNTAIAFNAMAEKAKDAGIALAICSAHRPFERQLAIWNAKA SGKRAVLDANEQAVSIKGLSDDAIVDLILLWSALPGASRHHWGTDLDVFDANQIDVKALRLVEAEYVQAGPCAKLHAWLV ENAHDFGFYFPFQQGQSAVSPEPWHISYFPVAQLLLPQFDRAELATLLENSDMLLKDAVLARLDYLVDEYVLRIAQP >Mature_237_residues MLTHLEIRPETAKLYGLSSPELVEYLSPYHLGYHSFWIEVNTAIAFNAMAEKAKDAGIALAICSAHRPFERQLAIWNAKA SGKRAVLDANEQAVSIKGLSDDAIVDLILLWSALPGASRHHWGTDLDVFDANQIDVKALRLVEAEYVQAGPCAKLHAWLV ENAHDFGFYFPFQQGQSAVSPEPWHISYFPVAQLLLPQFDRAELATLLENSDMLLKDAVLARLDYLVDEYVLRIAQP
Specific function: Unknown
COG id: COG1876
COG function: function code M; D-alanyl-D-alanine carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003709 [H]
Pfam domain/function: PF02557 VanY [H]
EC number: NA
Molecular weight: Translated: 26484; Mature: 26484
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTHLEIRPETAKLYGLSSPELVEYLSPYHLGYHSFWIEVNTAIAFNAMAEKAKDAGIAL CCCEEEECCCHHEEECCCCHHHHHHHCCHHCCEEEEEEEEECEEEHHHHHHHHCCCCEEE AICSAHRPFERQLAIWNAKASGKRAVLDANEQAVSIKGLSDDAIVDLILLWSALPGASRH EEECCCCCHHHHEEEEECCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCC HWGTDLDVFDANQIDVKALRLVEAEYVQAGPCAKLHAWLVENAHDFGFYFPFQQGQSAVS CCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEECCHHCCCCCCC PEPWHISYFPVAQLLLPQFDRAELATLLENSDMLLKDAVLARLDYLVDEYVLRIAQP CCCEEEEHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTHLEIRPETAKLYGLSSPELVEYLSPYHLGYHSFWIEVNTAIAFNAMAEKAKDAGIAL CCCEEEECCCHHEEECCCCHHHHHHHCCHHCCEEEEEEEEECEEEHHHHHHHHCCCCEEE AICSAHRPFERQLAIWNAKASGKRAVLDANEQAVSIKGLSDDAIVDLILLWSALPGASRH EEECCCCCHHHHEEEEECCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCC HWGTDLDVFDANQIDVKALRLVEAEYVQAGPCAKLHAWLVENAHDFGFYFPFQQGQSAVS CCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEECCHHCCCCCCC PEPWHISYFPVAQLLLPQFDRAELATLLENSDMLLKDAVLARLDYLVDEYVLRIAQP CCCEEEEHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]