| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is cga [H]
Identifier: 126174561
GI number: 126174561
Start: 2733165
End: 2734457
Strand: Direct
Name: cga [H]
Synonym: Sbal_2348
Alternate gene names: 126174561
Gene position: 2733165-2734457 (Clockwise)
Preceding gene: 126174560
Following gene: 126174562
Centisome position: 53.31
GC content: 50.19
Gene sequence:
>1293_bases ATGGAATCGAGTCCTACGCCGCAGCAGGATCTGCACACTAGCCAAACCCGTCACGCACAAACGTTAACAAGGCGCAGCCG CCTAGCGCTTGCCGTCGCCGCAAGTCTATTAGGGACAATAGGATTCACTGCTTGTTCACCCACATCGAATTCAGCAACAC CGAGCATGAGTGGCAATGCCGCATCAAATGTGCAGCAGGTTGCGCCCGGCGCACCGGGTAAAGCGCCGACTTGGGCATTT TCAGGTAAAACCGGTATTGGAACGTCGTACGAACCTTACACCCAAGGTCAATACCAAGATGCCAAGCAAAATCCCATTAG CCGCGTTTGGTTCTCCCTCGCCCAAGGTATTTTAACCGAAACCATGTATGGTCTGATCCATAATGCGCAGCTCAAAGAAC TGCAATTTGTGATCACGGGAAATGGCTTTGTCGATACAGAAAAAGATAACACCATCAGCAGCATAGAATATTTAGATACC GATGCTAATGGTCGCCCACAATCCCTTGCCTATAAAATTATCAATAAAGATATTGAAGGTAAGTATCAGATTGAAAAGCA TATCTTTACCGATCCTGACCGCGACACCCTAATGATGCGCGTCACCTTTACCGCCTTTGAAGACGGCATTACGCCGCATT TGTATGTCAATCCGCATATCGATAACGCAGGCGCCAATGATATCGGCCGCATCGATACTCATACTGACAATCATGCCAAC ACTCATGCTAGTAATCAGGCGCTGGTGGCCTATACCGCCGCCAAAGACAGCAGCGTGATGACGGTGAAATCCGATCTCAA TTTTGTGCAGGCAACGACAGGCTTTGTCGGCGTCTCTGATGGCCTAGCCGATTTGGCCGATAACGGCACACTCGATAAGC CCTATCAAACGACAAGTGCGCAAGATAAATCGACCGTTGGCAATATCGCCTTTACTGCGAGTTACCCTACGCTCATCAAA GCCAAACCCGTCACTTTTAATCTCGCCATCGGTTTTGGTAAAGATGAAGCACAGAGTTTAGCCAATGCCGATGCCACTTT GGCCGCAGGTTATGATGCTGTGCTGAGCGCCTACAAAGGCGATGCCACCCATGTCGGCTGGCACGATTACTTAAGCTCGC TGCCCGCCATCGCAAACATGGCCAACAACACCACTGATAGCGGTAAGCTGCTGTATACCAGTGCTATGGTCTTGAAAGCG CAGGAAGATAAAACATGCGGGCGCACTGATCGCCTCGTTATCCAATCCTTGGGGCGATACGGTTTCAGCAGCCGTGCCGA GTACTGGCTATAA
Upstream 100 bases:
>100_bases ACGCAAGGTGAACTTGGCCTGTTGGCGATTCACCGCAGCATGAAGCTTTTATATCAATTCAATCACTATAAAAATATAAC CATTATTTGGGGAGAACGAG
Downstream 100 bases:
>100_bases AGCGGTATGGCCGCGTGACTTTTACCAATGTGCCATGGCATTCCTCGCCATGGGTGACACGCAAACGCCCAAAGTGGCCT TCGAATACCTGAAAAAAGTG
Product: glucan 1,4-alpha-glucosidase
Products: NA
Alternate protein names: 1,4-alpha-D-glucan glucohydrolase; Glucan 1,4-alpha-glucosidase [H]
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MESSPTPQQDLHTSQTRHAQTLTRRSRLALAVAASLLGTIGFTACSPTSNSATPSMSGNAASNVQQVAPGAPGKAPTWAF SGKTGIGTSYEPYTQGQYQDAKQNPISRVWFSLAQGILTETMYGLIHNAQLKELQFVITGNGFVDTEKDNTISSIEYLDT DANGRPQSLAYKIINKDIEGKYQIEKHIFTDPDRDTLMMRVTFTAFEDGITPHLYVNPHIDNAGANDIGRIDTHTDNHAN THASNQALVAYTAAKDSSVMTVKSDLNFVQATTGFVGVSDGLADLADNGTLDKPYQTTSAQDKSTVGNIAFTASYPTLIK AKPVTFNLAIGFGKDEAQSLANADATLAAGYDAVLSAYKGDATHVGWHDYLSSLPAIANMANNTTDSGKLLYTSAMVLKA QEDKTCGRTDRLVIQSLGRYGFSSRAEYWL
Sequences:
>Translated_430_residues MESSPTPQQDLHTSQTRHAQTLTRRSRLALAVAASLLGTIGFTACSPTSNSATPSMSGNAASNVQQVAPGAPGKAPTWAF SGKTGIGTSYEPYTQGQYQDAKQNPISRVWFSLAQGILTETMYGLIHNAQLKELQFVITGNGFVDTEKDNTISSIEYLDT DANGRPQSLAYKIINKDIEGKYQIEKHIFTDPDRDTLMMRVTFTAFEDGITPHLYVNPHIDNAGANDIGRIDTHTDNHAN THASNQALVAYTAAKDSSVMTVKSDLNFVQATTGFVGVSDGLADLADNGTLDKPYQTTSAQDKSTVGNIAFTASYPTLIK AKPVTFNLAIGFGKDEAQSLANADATLAAGYDAVLSAYKGDATHVGWHDYLSSLPAIANMANNTTDSGKLLYTSAMVLKA QEDKTCGRTDRLVIQSLGRYGFSSRAEYWL >Mature_430_residues MESSPTPQQDLHTSQTRHAQTLTRRSRLALAVAASLLGTIGFTACSPTSNSATPSMSGNAASNVQQVAPGAPGKAPTWAF SGKTGIGTSYEPYTQGQYQDAKQNPISRVWFSLAQGILTETMYGLIHNAQLKELQFVITGNGFVDTEKDNTISSIEYLDT DANGRPQSLAYKIINKDIEGKYQIEKHIFTDPDRDTLMMRVTFTAFEDGITPHLYVNPHIDNAGANDIGRIDTHTDNHAN THASNQALVAYTAAKDSSVMTVKSDLNFVQATTGFVGVSDGLADLADNGTLDKPYQTTSAQDKSTVGNIAFTASYPTLIK AKPVTFNLAIGFGKDEAQSLANADATLAAGYDAVLSAYKGDATHVGWHDYLSSLPAIANMANNTTDSGKLLYTSAMVLKA QEDKTCGRTDRLVIQSLGRYGFSSRAEYWL
Specific function: CGA has typical kinetic properties for a glucoamylase, but this bacterial enzyme had higher isomaltose-hydrolyzing activity than other eukaryotic glucoamylases [H]
COG id: COG3387
COG function: function code G; Glucoamylase and related glycosyl hydrolases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 15 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR006425 - InterPro: IPR015220 - InterPro: IPR011013 - InterPro: IPR014718 - InterPro: IPR000165 - InterPro: IPR011613 [H]
Pfam domain/function: PF09137 Glucodextran_N; PF00723 Glyco_hydro_15 [H]
EC number: =3.2.1.3 [H]
Molecular weight: Translated: 46236; Mature: 46236
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESSPTPQQDLHTSQTRHAQTLTRRSRLALAVAASLLGTIGFTACSPTSNSATPSMSGNA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCC ASNVQQVAPGAPGKAPTWAFSGKTGIGTSYEPYTQGQYQDAKQNPISRVWFSLAQGILTE HHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHH TMYGLIHNAQLKELQFVITGNGFVDTEKDNTISSIEYLDTDANGRPQSLAYKIINKDIEG HHHHHHCCCCEEEEEEEEECCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCC KYQIEKHIFTDPDRDTLMMRVTFTAFEDGITPHLYVNPHIDNAGANDIGRIDTHTDNHAN EEEEEECCCCCCCCCEEEEEEEEEHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC THASNQALVAYTAAKDSSVMTVKSDLNFVQATTGFVGVSDGLADLADNGTLDKPYQTTSA CCCCCCEEEEEEECCCCCEEEEECCCCEEEECCCCEECCCCHHHHHCCCCCCCCCCCCCC QDKSTVGNIAFTASYPTLIKAKPVTFNLAIGFGKDEAQSLANADATLAAGYDAVLSAYKG CCCCCCCCEEEEECCCCEEEECCEEEEEEEECCCHHHHHHHCCCCHHHCCHHHHHHHHCC DATHVGWHDYLSSLPAIANMANNTTDSGKLLYTSAMVLKAQEDKTCGRTDRLVIQSLGRY CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHC GFSSRAEYWL CCCCCCCCCC >Mature Secondary Structure MESSPTPQQDLHTSQTRHAQTLTRRSRLALAVAASLLGTIGFTACSPTSNSATPSMSGNA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCC ASNVQQVAPGAPGKAPTWAFSGKTGIGTSYEPYTQGQYQDAKQNPISRVWFSLAQGILTE HHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHH TMYGLIHNAQLKELQFVITGNGFVDTEKDNTISSIEYLDTDANGRPQSLAYKIINKDIEG HHHHHHCCCCEEEEEEEEECCCEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCC KYQIEKHIFTDPDRDTLMMRVTFTAFEDGITPHLYVNPHIDNAGANDIGRIDTHTDNHAN EEEEEECCCCCCCCCEEEEEEEEEHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC THASNQALVAYTAAKDSSVMTVKSDLNFVQATTGFVGVSDGLADLADNGTLDKPYQTTSA CCCCCCEEEEEEECCCCCEEEEECCCCEEEECCCCEECCCCHHHHHCCCCCCCCCCCCCC QDKSTVGNIAFTASYPTLIKAKPVTFNLAIGFGKDEAQSLANADATLAAGYDAVLSAYKG CCCCCCCCEEEEECCCCEEEECCEEEEEEEECCCHHHHHHHCCCCHHHCCHHHHHHHHCC DATHVGWHDYLSSLPAIANMANNTTDSGKLLYTSAMVLKAQEDKTCGRTDRLVIQSLGRY CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHC GFSSRAEYWL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1633799 [H]