| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174540
Identifier: 126174540
GI number: 126174540
Start: 2711307
End: 2711849
Strand: Reverse
Name: 126174540
Synonym: Sbal_2327
Alternate gene names: NA
Gene position: 2711849-2711307 (Counterclockwise)
Preceding gene: 126174541
Following gene: 126174539
Centisome position: 52.89
GC content: 48.07
Gene sequence:
>543_bases ATGGCTACGACTATGCGTTTATTGAGAACCACCCAAGATCCAGCGGTTAACCTACAGACGGCACGCGTTTTTTATCGCAG AGCTGCCCGCGCGATTGTGTTATCGGGTGAAGACATTTTGCTGCTTTATACCCAAAAATATCGCGATTACAGCTTACCCG GCGGCGGGATTGACGACGGCGAGAGCCTCGAAGATGGACTGATCCGCGAGTTACAGGAAGAAACCGGCGCCCTAGACATT CAAGTGTTAGCGCCATTTGGTCGTTACGAAGAGTTTCGGCCTTGGTACCGTGAAGGGGCGAACGTAGTGCACATGGATTC ATTCTGTTATGTGTGCCGTATTGACACCGCACTGGGCGAGCGTGGTTTAGGTGAGACTCGATTAGAAGCCCATGAGATAA AAAATGGCATGCGGCCTGAATGGCTCAATATTCATCAAGCTATCGCCCATAATGAAGATATTCAGCGCAATCATCCCCAT AAAGGCCAATCAATAGAGCGTGAAACTTTTCTGCTAAAACAGATAGTTTTGGAATTTTTGTAA
Upstream 100 bases:
>100_bases TCAATCACTCGGACTGGACTGAGTGTGATTATTGCCTCTGCTACAGTTTTTGATCTGCATTTGGCACATTTTCGTTTATG CTGCGACTCCTTTTCGGCAA
Downstream 100 bases:
>100_bases GTTTTATCACTTTAGAATCATGTGTTTAATATATGATTTTATTTCACACATAACTGAGTGAGCAGGGTTTGGTTAGCGAT TAAACGTCGTTATTTAGCGT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: MutT/Nudix Family Protein; MutT/NUDIX Family Protein; Nudix Hydrolase Protein; Phosphohydrolase; NTP Pyrophosphohydrolase; NUDIX Hydrolase Superfamily Protein; MutT/NUDIX Protein; Nudix Hydrolase
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MATTMRLLRTTQDPAVNLQTARVFYRRAARAIVLSGEDILLLYTQKYRDYSLPGGGIDDGESLEDGLIRELQEETGALDI QVLAPFGRYEEFRPWYREGANVVHMDSFCYVCRIDTALGERGLGETRLEAHEIKNGMRPEWLNIHQAIAHNEDIQRNHPH KGQSIERETFLLKQIVLEFL
Sequences:
>Translated_180_residues MATTMRLLRTTQDPAVNLQTARVFYRRAARAIVLSGEDILLLYTQKYRDYSLPGGGIDDGESLEDGLIRELQEETGALDI QVLAPFGRYEEFRPWYREGANVVHMDSFCYVCRIDTALGERGLGETRLEAHEIKNGMRPEWLNIHQAIAHNEDIQRNHPH KGQSIERETFLLKQIVLEFL >Mature_179_residues ATTMRLLRTTQDPAVNLQTARVFYRRAARAIVLSGEDILLLYTQKYRDYSLPGGGIDDGESLEDGLIRELQEETGALDIQ VLAPFGRYEEFRPWYREGANVVHMDSFCYVCRIDTALGERGLGETRLEAHEIKNGMRPEWLNIHQAIAHNEDIQRNHPHK GQSIERETFLLKQIVLEFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20730; Mature: 20599
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTMRLLRTTQDPAVNLQTARVFYRRAARAIVLSGEDILLLYTQKYRDYSLPGGGIDDG CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCC ESLEDGLIRELQEETGALDIQVLAPFGRYEEFRPWYREGANVVHMDSFCYVCRIDTALGE CHHHHHHHHHHHHHHCCEEEEEECCCCCCHHCCHHHHCCCCEEEECCEEEEEEECHHHCC RGLGETRLEAHEIKNGMRPEWLNIHQAIAHNEDIQRNHPHKGQSIERETFLLKQIVLEFL CCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure ATTMRLLRTTQDPAVNLQTARVFYRRAARAIVLSGEDILLLYTQKYRDYSLPGGGIDDG CHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCCCCCC ESLEDGLIRELQEETGALDIQVLAPFGRYEEFRPWYREGANVVHMDSFCYVCRIDTALGE CHHHHHHHHHHHHHHCCEEEEEECCCCCCHHCCHHHHCCCCEEEECCEEEEEEECHHHCC RGLGETRLEAHEIKNGMRPEWLNIHQAIAHNEDIQRNHPHKGQSIERETFLLKQIVLEFL CCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA