| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yebA [H]
Identifier: 126174493
GI number: 126174493
Start: 2635809
End: 2638028
Strand: Direct
Name: yebA [H]
Synonym: Sbal_2277
Alternate gene names: 126174493
Gene position: 2635809-2638028 (Clockwise)
Preceding gene: 126174492
Following gene: 126174494
Centisome position: 51.41
GC content: 49.05
Gene sequence:
>2220_bases ATGACATTAACGGCCAGCAGCACGACACCGCAAATTGGCGATAATATCAGCCGTCAGACACTCTTTTGGTTATTGATCAC CAATATCGCCGTACTGAGCCCGCTATTTGATAAAACCACGCCTTGGACCTTAGGCATTTGCGCAATTTGTTTGCTGTGGC GTGTGGGGATTTATGTCGGCAAAGTGGCAAAGCCGCCGCGTTTTCTAGTGACCAGTCTTGCGCTCGGCGCCGCAACCACA TTGGCATTAGTCTCAAAGGAAATAGGCTTACTCAATGCGCTGGTGAATCTGCTGCTGTTAGGTTACGCCTTAAAATACAT TGAAATGCGTAACCAAAGGGATGTGCGCGTTGTCGTCCTCGCGGGCTATTTTATTATCGCGCTGACCTTTATTGATCACC AATCCAATACCGCGCATTTACTCGTGGTAACGCTGATCAATACCTGCGTACTCGTTACTTTGTATCAAGATAAACACTCC CTAAAACACACGGCGTGGCTCGGTAGTAAATTTTTACTCCAGAGTGTGCCCCTCGCGCTGCTGTTGTTTTTAGTGTTACC GCGTTTTGCGCCGCTCTGGTTAGTGCCCAACATGAAAGAAGCGCAAACGGGCTTGTCTGATAGTCTGGCCATTGGTGATA TCGGCAAGCTCACCCGTTCGACCGAACTGGCCTTTAGGGCGAGTTTTACCAATGCGGCGCCCATTAATGCAGAGCTATAT TGGCGCGCGCTGGTGATGGAAAACTATGACGGCGTTACTTGGCGTCAGGAGGAAGGCATTAAAAAGCTGCAAAAAGATGC ACTGCTGTTCCCGCCCTCGCGGCCCAGCCCCGCATTGATGCTTAATAGCCCAGCTTTGATGATCACCAGTCCTGACGCTA TGACCAGTAATGCTGATTTAATGACCAATGATCCTGATTTAATAAAGAGCCCCGCTTCGATAGACAGCGAAGGTCAAGAT ACTGCAAAACAAGGCAAGCAAAACAATAAGCCAAGTATTCGTTACCAAGTGATTGCTGAGCCGAGCCACCAGCCGTGGTT ATTTGGTCTTGATGTCGCCTACAGCCAAGATGATAGTGTGGTCAATATGCCCGATTATCGGCTGTTAGCACTGCGCAATG TCGATCAGCGAATGAGTTATCAAGTAGAGTCTTGGCCCAAGGCGAAGATGGATCTTAGGCTCTCTGCGCGGCAAAGGCAG ATTAACCTCGAACTACCAAGTAACAGTAATCCACAAACTTGGGTGCTGGCCGAGCAATTCAAGACTCAGTATCCCGAGCC TAAGCCACGATTGTGGGCCATGATGCGCCACTTTAATACCGAGCCTTTTTTCTACACACTCACGCCGCCTCCCATTGGAC CGCAACAAGTGGATGATTTTCTATTTGAAAACAAAGCCGGATTTTGTGTGCACTATGCCGCAGCCTTTATTTTTATGGCG CGGGCCACAGGCTTACCCGCGCGTATGGTTACAGGCTATCAGGGCGGTGAGTTTAATCCGCAAGCGGGTTACTACAGCGT GTATCAATATATGGCCCACGCATGGGCAGAGGTTTGGATCGAAGGTGAAGGTTGGGTACGTTTCGATCCGACCGCTATGG TGGCGCCCGATCGAATCGAACAAGGATTCGACGCCCAGTTTGATCCCGCGCTGAGTTATCTGCAGGAAAGCCCTTTTAGT AGCTTACGCTTTAAATCCATGCCTTGGCTCAATGAGTTAAGGCAACGTTTTGCCAGCATAGATTATTACTGGAGCGTGTG GGTACTGGGTTTCAATCAAGATAGGCAGAATCAAGTGCTCAGCGGCATTTTAGGTGATGTGACAAACACTAAAATCGCGG TATTTATGGGGCTGTGTATCAGCCTTATCGTGCTCTATATCGCCTACAGTGCGGGGCTATTACATTTTAGCACTCAGGAC GATCCTATCAGCGCTCGCTATCAACAGGTCTGCAATCGCCTCGCCCGCCATGGTATTAAACGCAATGACAGTGATGGACC AAACCAATTTGCGCAGCAGATTATCGAGCAATACCAACACAATGCACCACAGCTTTGTGCGCTGATGCATACCCTGACCC AAAGTTATGTGGCGCTGAAGTATCAAGATTTACCGGCTGATGACTATCAAGCGCATTTAACCGAATTTAAAGCGGCGGCG AAGCAACTGAATTGGTTATTGCTCAGGGCTAAGGTGAAAAAGAAGTTCACGCTAGCCTAG
Upstream 100 bases:
>100_bases CGCCGTCAGCCGTTAATTCGTCATCAGCGGCAAAGCACTCAAATAAAACGGCGAAAACCACCAGCAAGAAACGTCATATC CCGACCTCGAGGGAACAGGC
Downstream 100 bases:
>100_bases CATTTGTAAACGGAGCATTAGCCGGCCAAGTTTCATCGGTTCAAGGCTCAGTAAACACCTAAAATTGCGGGTTAATTCCA CAGAAGCAGCAATAGTGTTG
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 739; Mature: 738
Protein sequence:
>739_residues MTLTASSTTPQIGDNISRQTLFWLLITNIAVLSPLFDKTTPWTLGICAICLLWRVGIYVGKVAKPPRFLVTSLALGAATT LALVSKEIGLLNALVNLLLLGYALKYIEMRNQRDVRVVVLAGYFIIALTFIDHQSNTAHLLVVTLINTCVLVTLYQDKHS LKHTAWLGSKFLLQSVPLALLLFLVLPRFAPLWLVPNMKEAQTGLSDSLAIGDIGKLTRSTELAFRASFTNAAPINAELY WRALVMENYDGVTWRQEEGIKKLQKDALLFPPSRPSPALMLNSPALMITSPDAMTSNADLMTNDPDLIKSPASIDSEGQD TAKQGKQNNKPSIRYQVIAEPSHQPWLFGLDVAYSQDDSVVNMPDYRLLALRNVDQRMSYQVESWPKAKMDLRLSARQRQ INLELPSNSNPQTWVLAEQFKTQYPEPKPRLWAMMRHFNTEPFFYTLTPPPIGPQQVDDFLFENKAGFCVHYAAAFIFMA RATGLPARMVTGYQGGEFNPQAGYYSVYQYMAHAWAEVWIEGEGWVRFDPTAMVAPDRIEQGFDAQFDPALSYLQESPFS SLRFKSMPWLNELRQRFASIDYYWSVWVLGFNQDRQNQVLSGILGDVTNTKIAVFMGLCISLIVLYIAYSAGLLHFSTQD DPISARYQQVCNRLARHGIKRNDSDGPNQFAQQIIEQYQHNAPQLCALMHTLTQSYVALKYQDLPADDYQAHLTEFKAAA KQLNWLLLRAKVKKKFTLA
Sequences:
>Translated_739_residues MTLTASSTTPQIGDNISRQTLFWLLITNIAVLSPLFDKTTPWTLGICAICLLWRVGIYVGKVAKPPRFLVTSLALGAATT LALVSKEIGLLNALVNLLLLGYALKYIEMRNQRDVRVVVLAGYFIIALTFIDHQSNTAHLLVVTLINTCVLVTLYQDKHS LKHTAWLGSKFLLQSVPLALLLFLVLPRFAPLWLVPNMKEAQTGLSDSLAIGDIGKLTRSTELAFRASFTNAAPINAELY WRALVMENYDGVTWRQEEGIKKLQKDALLFPPSRPSPALMLNSPALMITSPDAMTSNADLMTNDPDLIKSPASIDSEGQD TAKQGKQNNKPSIRYQVIAEPSHQPWLFGLDVAYSQDDSVVNMPDYRLLALRNVDQRMSYQVESWPKAKMDLRLSARQRQ INLELPSNSNPQTWVLAEQFKTQYPEPKPRLWAMMRHFNTEPFFYTLTPPPIGPQQVDDFLFENKAGFCVHYAAAFIFMA RATGLPARMVTGYQGGEFNPQAGYYSVYQYMAHAWAEVWIEGEGWVRFDPTAMVAPDRIEQGFDAQFDPALSYLQESPFS SLRFKSMPWLNELRQRFASIDYYWSVWVLGFNQDRQNQVLSGILGDVTNTKIAVFMGLCISLIVLYIAYSAGLLHFSTQD DPISARYQQVCNRLARHGIKRNDSDGPNQFAQQIIEQYQHNAPQLCALMHTLTQSYVALKYQDLPADDYQAHLTEFKAAA KQLNWLLLRAKVKKKFTLA >Mature_738_residues TLTASSTTPQIGDNISRQTLFWLLITNIAVLSPLFDKTTPWTLGICAICLLWRVGIYVGKVAKPPRFLVTSLALGAATTL ALVSKEIGLLNALVNLLLLGYALKYIEMRNQRDVRVVVLAGYFIIALTFIDHQSNTAHLLVVTLINTCVLVTLYQDKHSL KHTAWLGSKFLLQSVPLALLLFLVLPRFAPLWLVPNMKEAQTGLSDSLAIGDIGKLTRSTELAFRASFTNAAPINAELYW RALVMENYDGVTWRQEEGIKKLQKDALLFPPSRPSPALMLNSPALMITSPDAMTSNADLMTNDPDLIKSPASIDSEGQDT AKQGKQNNKPSIRYQVIAEPSHQPWLFGLDVAYSQDDSVVNMPDYRLLALRNVDQRMSYQVESWPKAKMDLRLSARQRQI NLELPSNSNPQTWVLAEQFKTQYPEPKPRLWAMMRHFNTEPFFYTLTPPPIGPQQVDDFLFENKAGFCVHYAAAFIFMAR ATGLPARMVTGYQGGEFNPQAGYYSVYQYMAHAWAEVWIEGEGWVRFDPTAMVAPDRIEQGFDAQFDPALSYLQESPFSS LRFKSMPWLNELRQRFASIDYYWSVWVLGFNQDRQNQVLSGILGDVTNTKIAVFMGLCISLIVLYIAYSAGLLHFSTQDD PISARYQQVCNRLARHGIKRNDSDGPNQFAQQIIEQYQHNAPQLCALMHTLTQSYVALKYQDLPADDYQAHLTEFKAAAK QLNWLLLRAKVKKKFTLA
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002931 [H]
Pfam domain/function: PF01841 Transglut_core [H]
EC number: NA
Molecular weight: Translated: 83448; Mature: 83317
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTASSTTPQIGDNISRQTLFWLLITNIAVLSPLFDKTTPWTLGICAICLLWRVGIYVG CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC KVAKPPRFLVTSLALGAATTLALVSKEIGLLNALVNLLLLGYALKYIEMRNQRDVRVVVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE AGYFIIALTFIDHQSNTAHLLVVTLINTCVLVTLYQDKHSLKHTAWLGSKFLLQSVPLAL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHH LLFLVLPRFAPLWLVPNMKEAQTGLSDSLAIGDIGKLTRSTELAFRASFTNAAPINAELY HHHHHHHCCCCEEECCCCHHHHCCCCCCEECCCHHHHHHHHHHEEEECCCCCCCCCHHHE WRALVMENYDGVTWRQEEGIKKLQKDALLFPPSRPSPALMLNSPALMITSPDAMTSNADL EEEEEHCCCCCCCCCHHHHHHHHHHCCEECCCCCCCCEEEECCCEEEEECCCCCCCCCCC MTNDPDLIKSPASIDSEGQDTAKQGKQNNKPSIRYQVIAEPSHQPWLFGLDVAYSQDDSV CCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCE VNMPDYRLLALRNVDQRMSYQVESWPKAKMDLRLSARQRQINLELPSNSNPQTWVLAEQF ECCCCCEEEEHHCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEHHHH KTQYPEPKPRLWAMMRHFNTEPFFYTLTPPPIGPQQVDDFLFENKAGFCVHYAAAFIFMA HHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH RATGLPARMVTGYQGGEFNPQAGYYSVYQYMAHAWAEVWIEGEGWVRFDPTAMVAPDRIE HHCCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEECCCEECCCHHHH QGFDAQFDPALSYLQESPFSSLRFKSMPWLNELRQRFASIDYYWSVWVLGFNQDRQNQVL CCCCCCCHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHH SGILGDVTNTKIAVFMGLCISLIVLYIAYSAGLLHFSTQDDPISARYQQVCNRLARHGIK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCC RNDSDGPNQFAQQIIEQYQHNAPQLCALMHTLTQSYVALKYQDLPADDYQAHLTEFKAAA CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHH KQLNWLLLRAKVKKKFTLA HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TLTASSTTPQIGDNISRQTLFWLLITNIAVLSPLFDKTTPWTLGICAICLLWRVGIYVG EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC KVAKPPRFLVTSLALGAATTLALVSKEIGLLNALVNLLLLGYALKYIEMRNQRDVRVVVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE AGYFIIALTFIDHQSNTAHLLVVTLINTCVLVTLYQDKHSLKHTAWLGSKFLLQSVPLAL HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHH LLFLVLPRFAPLWLVPNMKEAQTGLSDSLAIGDIGKLTRSTELAFRASFTNAAPINAELY HHHHHHHCCCCEEECCCCHHHHCCCCCCEECCCHHHHHHHHHHEEEECCCCCCCCCHHHE WRALVMENYDGVTWRQEEGIKKLQKDALLFPPSRPSPALMLNSPALMITSPDAMTSNADL EEEEEHCCCCCCCCCHHHHHHHHHHCCEECCCCCCCCEEEECCCEEEEECCCCCCCCCCC MTNDPDLIKSPASIDSEGQDTAKQGKQNNKPSIRYQVIAEPSHQPWLFGLDVAYSQDDSV CCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCE VNMPDYRLLALRNVDQRMSYQVESWPKAKMDLRLSARQRQINLELPSNSNPQTWVLAEQF ECCCCCEEEEHHCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEHHHH KTQYPEPKPRLWAMMRHFNTEPFFYTLTPPPIGPQQVDDFLFENKAGFCVHYAAAFIFMA HHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH RATGLPARMVTGYQGGEFNPQAGYYSVYQYMAHAWAEVWIEGEGWVRFDPTAMVAPDRIE HHCCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEECCCEECCCHHHH QGFDAQFDPALSYLQESPFSSLRFKSMPWLNELRQRFASIDYYWSVWVLGFNQDRQNQVL CCCCCCCHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHH SGILGDVTNTKIAVFMGLCISLIVLYIAYSAGLLHFSTQDDPISARYQQVCNRLARHGIK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCC RNDSDGPNQFAQQIIEQYQHNAPQLCALMHTLTQSYVALKYQDLPADDYQAHLTEFKAAA CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHH KQLNWLLLRAKVKKKFTLA HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]