Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is yebA [H]

Identifier: 126174493

GI number: 126174493

Start: 2635809

End: 2638028

Strand: Direct

Name: yebA [H]

Synonym: Sbal_2277

Alternate gene names: 126174493

Gene position: 2635809-2638028 (Clockwise)

Preceding gene: 126174492

Following gene: 126174494

Centisome position: 51.41

GC content: 49.05

Gene sequence:

>2220_bases
ATGACATTAACGGCCAGCAGCACGACACCGCAAATTGGCGATAATATCAGCCGTCAGACACTCTTTTGGTTATTGATCAC
CAATATCGCCGTACTGAGCCCGCTATTTGATAAAACCACGCCTTGGACCTTAGGCATTTGCGCAATTTGTTTGCTGTGGC
GTGTGGGGATTTATGTCGGCAAAGTGGCAAAGCCGCCGCGTTTTCTAGTGACCAGTCTTGCGCTCGGCGCCGCAACCACA
TTGGCATTAGTCTCAAAGGAAATAGGCTTACTCAATGCGCTGGTGAATCTGCTGCTGTTAGGTTACGCCTTAAAATACAT
TGAAATGCGTAACCAAAGGGATGTGCGCGTTGTCGTCCTCGCGGGCTATTTTATTATCGCGCTGACCTTTATTGATCACC
AATCCAATACCGCGCATTTACTCGTGGTAACGCTGATCAATACCTGCGTACTCGTTACTTTGTATCAAGATAAACACTCC
CTAAAACACACGGCGTGGCTCGGTAGTAAATTTTTACTCCAGAGTGTGCCCCTCGCGCTGCTGTTGTTTTTAGTGTTACC
GCGTTTTGCGCCGCTCTGGTTAGTGCCCAACATGAAAGAAGCGCAAACGGGCTTGTCTGATAGTCTGGCCATTGGTGATA
TCGGCAAGCTCACCCGTTCGACCGAACTGGCCTTTAGGGCGAGTTTTACCAATGCGGCGCCCATTAATGCAGAGCTATAT
TGGCGCGCGCTGGTGATGGAAAACTATGACGGCGTTACTTGGCGTCAGGAGGAAGGCATTAAAAAGCTGCAAAAAGATGC
ACTGCTGTTCCCGCCCTCGCGGCCCAGCCCCGCATTGATGCTTAATAGCCCAGCTTTGATGATCACCAGTCCTGACGCTA
TGACCAGTAATGCTGATTTAATGACCAATGATCCTGATTTAATAAAGAGCCCCGCTTCGATAGACAGCGAAGGTCAAGAT
ACTGCAAAACAAGGCAAGCAAAACAATAAGCCAAGTATTCGTTACCAAGTGATTGCTGAGCCGAGCCACCAGCCGTGGTT
ATTTGGTCTTGATGTCGCCTACAGCCAAGATGATAGTGTGGTCAATATGCCCGATTATCGGCTGTTAGCACTGCGCAATG
TCGATCAGCGAATGAGTTATCAAGTAGAGTCTTGGCCCAAGGCGAAGATGGATCTTAGGCTCTCTGCGCGGCAAAGGCAG
ATTAACCTCGAACTACCAAGTAACAGTAATCCACAAACTTGGGTGCTGGCCGAGCAATTCAAGACTCAGTATCCCGAGCC
TAAGCCACGATTGTGGGCCATGATGCGCCACTTTAATACCGAGCCTTTTTTCTACACACTCACGCCGCCTCCCATTGGAC
CGCAACAAGTGGATGATTTTCTATTTGAAAACAAAGCCGGATTTTGTGTGCACTATGCCGCAGCCTTTATTTTTATGGCG
CGGGCCACAGGCTTACCCGCGCGTATGGTTACAGGCTATCAGGGCGGTGAGTTTAATCCGCAAGCGGGTTACTACAGCGT
GTATCAATATATGGCCCACGCATGGGCAGAGGTTTGGATCGAAGGTGAAGGTTGGGTACGTTTCGATCCGACCGCTATGG
TGGCGCCCGATCGAATCGAACAAGGATTCGACGCCCAGTTTGATCCCGCGCTGAGTTATCTGCAGGAAAGCCCTTTTAGT
AGCTTACGCTTTAAATCCATGCCTTGGCTCAATGAGTTAAGGCAACGTTTTGCCAGCATAGATTATTACTGGAGCGTGTG
GGTACTGGGTTTCAATCAAGATAGGCAGAATCAAGTGCTCAGCGGCATTTTAGGTGATGTGACAAACACTAAAATCGCGG
TATTTATGGGGCTGTGTATCAGCCTTATCGTGCTCTATATCGCCTACAGTGCGGGGCTATTACATTTTAGCACTCAGGAC
GATCCTATCAGCGCTCGCTATCAACAGGTCTGCAATCGCCTCGCCCGCCATGGTATTAAACGCAATGACAGTGATGGACC
AAACCAATTTGCGCAGCAGATTATCGAGCAATACCAACACAATGCACCACAGCTTTGTGCGCTGATGCATACCCTGACCC
AAAGTTATGTGGCGCTGAAGTATCAAGATTTACCGGCTGATGACTATCAAGCGCATTTAACCGAATTTAAAGCGGCGGCG
AAGCAACTGAATTGGTTATTGCTCAGGGCTAAGGTGAAAAAGAAGTTCACGCTAGCCTAG

Upstream 100 bases:

>100_bases
CGCCGTCAGCCGTTAATTCGTCATCAGCGGCAAAGCACTCAAATAAAACGGCGAAAACCACCAGCAAGAAACGTCATATC
CCGACCTCGAGGGAACAGGC

Downstream 100 bases:

>100_bases
CATTTGTAAACGGAGCATTAGCCGGCCAAGTTTCATCGGTTCAAGGCTCAGTAAACACCTAAAATTGCGGGTTAATTCCA
CAGAAGCAGCAATAGTGTTG

Product: transglutaminase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 739; Mature: 738

Protein sequence:

>739_residues
MTLTASSTTPQIGDNISRQTLFWLLITNIAVLSPLFDKTTPWTLGICAICLLWRVGIYVGKVAKPPRFLVTSLALGAATT
LALVSKEIGLLNALVNLLLLGYALKYIEMRNQRDVRVVVLAGYFIIALTFIDHQSNTAHLLVVTLINTCVLVTLYQDKHS
LKHTAWLGSKFLLQSVPLALLLFLVLPRFAPLWLVPNMKEAQTGLSDSLAIGDIGKLTRSTELAFRASFTNAAPINAELY
WRALVMENYDGVTWRQEEGIKKLQKDALLFPPSRPSPALMLNSPALMITSPDAMTSNADLMTNDPDLIKSPASIDSEGQD
TAKQGKQNNKPSIRYQVIAEPSHQPWLFGLDVAYSQDDSVVNMPDYRLLALRNVDQRMSYQVESWPKAKMDLRLSARQRQ
INLELPSNSNPQTWVLAEQFKTQYPEPKPRLWAMMRHFNTEPFFYTLTPPPIGPQQVDDFLFENKAGFCVHYAAAFIFMA
RATGLPARMVTGYQGGEFNPQAGYYSVYQYMAHAWAEVWIEGEGWVRFDPTAMVAPDRIEQGFDAQFDPALSYLQESPFS
SLRFKSMPWLNELRQRFASIDYYWSVWVLGFNQDRQNQVLSGILGDVTNTKIAVFMGLCISLIVLYIAYSAGLLHFSTQD
DPISARYQQVCNRLARHGIKRNDSDGPNQFAQQIIEQYQHNAPQLCALMHTLTQSYVALKYQDLPADDYQAHLTEFKAAA
KQLNWLLLRAKVKKKFTLA

Sequences:

>Translated_739_residues
MTLTASSTTPQIGDNISRQTLFWLLITNIAVLSPLFDKTTPWTLGICAICLLWRVGIYVGKVAKPPRFLVTSLALGAATT
LALVSKEIGLLNALVNLLLLGYALKYIEMRNQRDVRVVVLAGYFIIALTFIDHQSNTAHLLVVTLINTCVLVTLYQDKHS
LKHTAWLGSKFLLQSVPLALLLFLVLPRFAPLWLVPNMKEAQTGLSDSLAIGDIGKLTRSTELAFRASFTNAAPINAELY
WRALVMENYDGVTWRQEEGIKKLQKDALLFPPSRPSPALMLNSPALMITSPDAMTSNADLMTNDPDLIKSPASIDSEGQD
TAKQGKQNNKPSIRYQVIAEPSHQPWLFGLDVAYSQDDSVVNMPDYRLLALRNVDQRMSYQVESWPKAKMDLRLSARQRQ
INLELPSNSNPQTWVLAEQFKTQYPEPKPRLWAMMRHFNTEPFFYTLTPPPIGPQQVDDFLFENKAGFCVHYAAAFIFMA
RATGLPARMVTGYQGGEFNPQAGYYSVYQYMAHAWAEVWIEGEGWVRFDPTAMVAPDRIEQGFDAQFDPALSYLQESPFS
SLRFKSMPWLNELRQRFASIDYYWSVWVLGFNQDRQNQVLSGILGDVTNTKIAVFMGLCISLIVLYIAYSAGLLHFSTQD
DPISARYQQVCNRLARHGIKRNDSDGPNQFAQQIIEQYQHNAPQLCALMHTLTQSYVALKYQDLPADDYQAHLTEFKAAA
KQLNWLLLRAKVKKKFTLA
>Mature_738_residues
TLTASSTTPQIGDNISRQTLFWLLITNIAVLSPLFDKTTPWTLGICAICLLWRVGIYVGKVAKPPRFLVTSLALGAATTL
ALVSKEIGLLNALVNLLLLGYALKYIEMRNQRDVRVVVLAGYFIIALTFIDHQSNTAHLLVVTLINTCVLVTLYQDKHSL
KHTAWLGSKFLLQSVPLALLLFLVLPRFAPLWLVPNMKEAQTGLSDSLAIGDIGKLTRSTELAFRASFTNAAPINAELYW
RALVMENYDGVTWRQEEGIKKLQKDALLFPPSRPSPALMLNSPALMITSPDAMTSNADLMTNDPDLIKSPASIDSEGQDT
AKQGKQNNKPSIRYQVIAEPSHQPWLFGLDVAYSQDDSVVNMPDYRLLALRNVDQRMSYQVESWPKAKMDLRLSARQRQI
NLELPSNSNPQTWVLAEQFKTQYPEPKPRLWAMMRHFNTEPFFYTLTPPPIGPQQVDDFLFENKAGFCVHYAAAFIFMAR
ATGLPARMVTGYQGGEFNPQAGYYSVYQYMAHAWAEVWIEGEGWVRFDPTAMVAPDRIEQGFDAQFDPALSYLQESPFSS
LRFKSMPWLNELRQRFASIDYYWSVWVLGFNQDRQNQVLSGILGDVTNTKIAVFMGLCISLIVLYIAYSAGLLHFSTQDD
PISARYQQVCNRLARHGIKRNDSDGPNQFAQQIIEQYQHNAPQLCALMHTLTQSYVALKYQDLPADDYQAHLTEFKAAAK
QLNWLLLRAKVKKKFTLA

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002931 [H]

Pfam domain/function: PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 83448; Mature: 83317

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTASSTTPQIGDNISRQTLFWLLITNIAVLSPLFDKTTPWTLGICAICLLWRVGIYVG
CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
KVAKPPRFLVTSLALGAATTLALVSKEIGLLNALVNLLLLGYALKYIEMRNQRDVRVVVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
AGYFIIALTFIDHQSNTAHLLVVTLINTCVLVTLYQDKHSLKHTAWLGSKFLLQSVPLAL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LLFLVLPRFAPLWLVPNMKEAQTGLSDSLAIGDIGKLTRSTELAFRASFTNAAPINAELY
HHHHHHHCCCCEEECCCCHHHHCCCCCCEECCCHHHHHHHHHHEEEECCCCCCCCCHHHE
WRALVMENYDGVTWRQEEGIKKLQKDALLFPPSRPSPALMLNSPALMITSPDAMTSNADL
EEEEEHCCCCCCCCCHHHHHHHHHHCCEECCCCCCCCEEEECCCEEEEECCCCCCCCCCC
MTNDPDLIKSPASIDSEGQDTAKQGKQNNKPSIRYQVIAEPSHQPWLFGLDVAYSQDDSV
CCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCE
VNMPDYRLLALRNVDQRMSYQVESWPKAKMDLRLSARQRQINLELPSNSNPQTWVLAEQF
ECCCCCEEEEHHCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEHHHH
KTQYPEPKPRLWAMMRHFNTEPFFYTLTPPPIGPQQVDDFLFENKAGFCVHYAAAFIFMA
HHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
RATGLPARMVTGYQGGEFNPQAGYYSVYQYMAHAWAEVWIEGEGWVRFDPTAMVAPDRIE
HHCCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEECCCEECCCHHHH
QGFDAQFDPALSYLQESPFSSLRFKSMPWLNELRQRFASIDYYWSVWVLGFNQDRQNQVL
CCCCCCCHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHH
SGILGDVTNTKIAVFMGLCISLIVLYIAYSAGLLHFSTQDDPISARYQQVCNRLARHGIK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCC
RNDSDGPNQFAQQIIEQYQHNAPQLCALMHTLTQSYVALKYQDLPADDYQAHLTEFKAAA
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHH
KQLNWLLLRAKVKKKFTLA
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLTASSTTPQIGDNISRQTLFWLLITNIAVLSPLFDKTTPWTLGICAICLLWRVGIYVG
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
KVAKPPRFLVTSLALGAATTLALVSKEIGLLNALVNLLLLGYALKYIEMRNQRDVRVVVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
AGYFIIALTFIDHQSNTAHLLVVTLINTCVLVTLYQDKHSLKHTAWLGSKFLLQSVPLAL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
LLFLVLPRFAPLWLVPNMKEAQTGLSDSLAIGDIGKLTRSTELAFRASFTNAAPINAELY
HHHHHHHCCCCEEECCCCHHHHCCCCCCEECCCHHHHHHHHHHEEEECCCCCCCCCHHHE
WRALVMENYDGVTWRQEEGIKKLQKDALLFPPSRPSPALMLNSPALMITSPDAMTSNADL
EEEEEHCCCCCCCCCHHHHHHHHHHCCEECCCCCCCCEEEECCCEEEEECCCCCCCCCCC
MTNDPDLIKSPASIDSEGQDTAKQGKQNNKPSIRYQVIAEPSHQPWLFGLDVAYSQDDSV
CCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCE
VNMPDYRLLALRNVDQRMSYQVESWPKAKMDLRLSARQRQINLELPSNSNPQTWVLAEQF
ECCCCCEEEEHHCHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCEEEEHHHH
KTQYPEPKPRLWAMMRHFNTEPFFYTLTPPPIGPQQVDDFLFENKAGFCVHYAAAFIFMA
HHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
RATGLPARMVTGYQGGEFNPQAGYYSVYQYMAHAWAEVWIEGEGWVRFDPTAMVAPDRIE
HHCCCCHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEECCCEECCCHHHH
QGFDAQFDPALSYLQESPFSSLRFKSMPWLNELRQRFASIDYYWSVWVLGFNQDRQNQVL
CCCCCCCHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHH
SGILGDVTNTKIAVFMGLCISLIVLYIAYSAGLLHFSTQDDPISARYQQVCNRLARHGIK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCC
RNDSDGPNQFAQQIIEQYQHNAPQLCALMHTLTQSYVALKYQDLPADDYQAHLTEFKAAA
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHH
KQLNWLLLRAKVKKKFTLA
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]