| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is yeaC [H]
Identifier: 126174491
GI number: 126174491
Start: 2633704
End: 2634615
Strand: Direct
Name: yeaC [H]
Synonym: Sbal_2275
Alternate gene names: 126174491
Gene position: 2633704-2634615 (Clockwise)
Preceding gene: 126174490
Following gene: 126174492
Centisome position: 51.37
GC content: 49.89
Gene sequence:
>912_bases GTGGCACAATCTGGGATCAGCGAATTACTACAACAACTCGAACAAGTGTTGCTGGGCAAACCTAGGCAAATTCGGCTTGC TTTGGCCTGCATTCTCGCCCGCGGCCACCTGTTGATTGAAGATTTACCCGGCATGGGTAAAACCAGTATTTCCCATGGCA TAGCCCAAAGCTTGGGCTTGAGCTATCAAAGAATTCAATTTACCAGCGACATGCTGCCCGCTGATATTCTCGGGGTGTCG ATTTTTGATAAACATCAGGCGCAATTTATCTTCCATCCAGGGCCGATTTTTAAGCAGATGATCTTGGCCGATGAAATTAA CCGCGCTAGCCCTAAGACCCAAAGCGCCTTGCTTGAAGCGATGGCCGAACAACAAATCTCCGTCGATGGCATCACCCACA GATTACCCAATCCTTTCTTTGTGATCGCGACCCAAAATCCCACCGATCAATCCGGCACATTTCCGCTACCAGAATCGCAG CTCGACCGGTTTATGATGCGTCTGTCAATTGGTTATCCAAGCCACGACGCCGAACTTGCGATGCTGAAGAGCAATCATAA CCACTTAACCTTAGATCAACTGCCCCAATGCTTGACACCACTGGCCTTGATGCAACTGCAAGAACAGTGCGACAAGGTCA GCGCTTCCGATGCCTTACTCAATTACATTCTGGCCTTAGTGAGTTTTTCTCGCAGCCAAAGTGATAGCGTGGGTTTATCG CCCCGCGCCACCAAAGCCCTATTACAAGCCGCTAAGGCATGGGCTTTTTTAGCGGGTCGACATTATTTAGTCCCTGAAGA TGTACAAGCGGTCTTTTGCTGCGTGGCGGAGCACAGACTCAGAACCAGTAGCCAATTACAGGGTGAAGCCTTATCCGAGC GAATTCTGGCGAGCGTTAACCCCATCATGTGA
Upstream 100 bases:
>100_bases ATGCCACTGGATAAGCTGGCTATGATCCGCCATAGTGGTAAAGCTTGTCTGCTTTCGCATGCACTTTCAGTTACGCTTTT AAATGTATTAGGAGTCGCCC
Downstream 100 bases:
>100_bases TGAACCGCTGTCATGAACAATATTGCTAAGGCATGCAGTTAATCGAGCAGTTAACCTAGGCATTAAAGCAAGCCATTCAA CCATGGAAGTAATGCAGAAG
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MAQSGISELLQQLEQVLLGKPRQIRLALACILARGHLLIEDLPGMGKTSISHGIAQSLGLSYQRIQFTSDMLPADILGVS IFDKHQAQFIFHPGPIFKQMILADEINRASPKTQSALLEAMAEQQISVDGITHRLPNPFFVIATQNPTDQSGTFPLPESQ LDRFMMRLSIGYPSHDAELAMLKSNHNHLTLDQLPQCLTPLALMQLQEQCDKVSASDALLNYILALVSFSRSQSDSVGLS PRATKALLQAAKAWAFLAGRHYLVPEDVQAVFCCVAEHRLRTSSQLQGEALSERILASVNPIM
Sequences:
>Translated_303_residues MAQSGISELLQQLEQVLLGKPRQIRLALACILARGHLLIEDLPGMGKTSISHGIAQSLGLSYQRIQFTSDMLPADILGVS IFDKHQAQFIFHPGPIFKQMILADEINRASPKTQSALLEAMAEQQISVDGITHRLPNPFFVIATQNPTDQSGTFPLPESQ LDRFMMRLSIGYPSHDAELAMLKSNHNHLTLDQLPQCLTPLALMQLQEQCDKVSASDALLNYILALVSFSRSQSDSVGLS PRATKALLQAAKAWAFLAGRHYLVPEDVQAVFCCVAEHRLRTSSQLQGEALSERILASVNPIM >Mature_302_residues AQSGISELLQQLEQVLLGKPRQIRLALACILARGHLLIEDLPGMGKTSISHGIAQSLGLSYQRIQFTSDMLPADILGVSI FDKHQAQFIFHPGPIFKQMILADEINRASPKTQSALLEAMAEQQISVDGITHRLPNPFFVIATQNPTDQSGTFPLPESQL DRFMMRLSIGYPSHDAELAMLKSNHNHLTLDQLPQCLTPLALMQLQEQCDKVSASDALLNYILALVSFSRSQSDSVGLSP RATKALLQAAKAWAFLAGRHYLVPEDVQAVFCCVAEHRLRTSSQLQGEALSERILASVNPIM
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 33332; Mature: 33201
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSGISELLQQLEQVLLGKPRQIRLALACILARGHLLIEDLPGMGKTSISHGIAQSLGL CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCC SYQRIQFTSDMLPADILGVSIFDKHQAQFIFHPGPIFKQMILADEINRASPKTQSALLEA CHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHH MAEQQISVDGITHRLPNPFFVIATQNPTDQSGTFPLPESQLDRFMMRLSIGYPSHDAELA HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEE MLKSNHNHLTLDQLPQCLTPLALMQLQEQCDKVSASDALLNYILALVSFSRSQSDSVGLS EEECCCCEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC PRATKALLQAAKAWAFLAGRHYLVPEDVQAVFCCVAEHRLRTSSQLQGEALSERILASVN HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PIM CCC >Mature Secondary Structure AQSGISELLQQLEQVLLGKPRQIRLALACILARGHLLIEDLPGMGKTSISHGIAQSLGL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCC SYQRIQFTSDMLPADILGVSIFDKHQAQFIFHPGPIFKQMILADEINRASPKTQSALLEA CHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHH MAEQQISVDGITHRLPNPFFVIATQNPTDQSGTFPLPESQLDRFMMRLSIGYPSHDAELA HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEE MLKSNHNHLTLDQLPQCLTPLALMQLQEQCDKVSASDALLNYILALVSFSRSQSDSVGLS EEECCCCEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC PRATKALLQAAKAWAFLAGRHYLVPEDVQAVFCCVAEHRLRTSSQLQGEALSERILASVN HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PIM CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]