Click here to switch to the map view.

The map label for this gene is parA [H]

Identifier: 126174396

GI number: 126174396

Start: 2525571

End: 2526209

Strand: Reverse

Name: parA [H]

Synonym: Sbal_2180

Alternate gene names: 126174396

Gene position: 2526209-2525571 (Counterclockwise)

Preceding gene: 126174397

Following gene: 126174394

Centisome position: 49.27

GC content: 42.41

Gene sequence:

>639_bases
ATGTTTATTCGGGCCTACCTGCGCGCATCAACAGATGAACAAGATGCCAATCGAGCTAGAAATGAGTTGGTTCAGTTTTC
AGACAGTAAAAATGTTCGCATAGCCAGTTTTTATACTGAGACACAATCTGGGGCTAAAATTGAACGACCTGAACTTGGTC
GCTTGATCATGGACTCACATCCTGGTGATGTTTTACTTATAGAAAAAGTCGATAGATTGTCTCGCCTCCCCTTCGAGCAA
TGGAAGGTCCTAAAAAGTAAATTGGTAAAAGCCAATATTCATATTGTTGTCGTTGACCAGCCAATGACACATGGGATCTT
AAATGGCACAGAAGAACATACCATGATCGCAAAGGTACTGACTGAGTTCATGATTGATTTGGCCGCAGCTATGGCCAGGG
ATGATTATGAAACAAGAAGAAAGCGACAAGCACAAGGCATAGAAAAGGCCAAAGTTTTAGGCAAATACCTTGGGCGTCAG
CCTGATAATGAATTAAGGCGGAACATTCGGTTATTACTCGATGAGGGGAAAAGCTGGTCACAAGTGCAGAGCCTGCTTAA
ATGCAGTCGTTCTACCATTGCCAAAGCGGCTAAGTGGAATGAACCAAACATAATGAACCTTACCTCACTTAAAATTTGA

Upstream 100 bases:

>100_bases
TAGCCACATCTCATTGCTAATTGGTTCGCTATATATTGATTTTAAACCCTACTCGCACTAGCATCGTAAACCACATCCTA
AAAACACCAAATGAGGCAAA

Downstream 100 bases:

>100_bases
TTTACTCGCAAAATTAATATCGACGAAATATGTTGGCGAGGCAAATGGGACTTTTTCAGGATAATTTATAGGTCCTCTAG
AGGGCGTTGAATGTACAAAT

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MFIRAYLRASTDEQDANRARNELVQFSDSKNVRIASFYTETQSGAKIERPELGRLIMDSHPGDVLLIEKVDRLSRLPFEQ
WKVLKSKLVKANIHIVVVDQPMTHGILNGTEEHTMIAKVLTEFMIDLAAAMARDDYETRRKRQAQGIEKAKVLGKYLGRQ
PDNELRRNIRLLLDEGKSWSQVQSLLKCSRSTIAKAAKWNEPNIMNLTSLKI

Sequences:

>Translated_212_residues
MFIRAYLRASTDEQDANRARNELVQFSDSKNVRIASFYTETQSGAKIERPELGRLIMDSHPGDVLLIEKVDRLSRLPFEQ
WKVLKSKLVKANIHIVVVDQPMTHGILNGTEEHTMIAKVLTEFMIDLAAAMARDDYETRRKRQAQGIEKAKVLGKYLGRQ
PDNELRRNIRLLLDEGKSWSQVQSLLKCSRSTIAKAAKWNEPNIMNLTSLKI
>Mature_212_residues
MFIRAYLRASTDEQDANRARNELVQFSDSKNVRIASFYTETQSGAKIERPELGRLIMDSHPGDVLLIEKVDRLSRLPFEQ
WKVLKSKLVKANIHIVVVDQPMTHGILNGTEEHTMIAKVLTEFMIDLAAAMARDDYETRRKRQAQGIEKAKVLGKYLGRQ
PDNELRRNIRLLLDEGKSWSQVQSLLKCSRSTIAKAAKWNEPNIMNLTSLKI

Specific function: Involved in plasmid partition [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 24290; Mature: 24290

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIRAYLRASTDEQDANRARNELVQFSDSKNVRIASFYTETQSGAKIERPELGRLIMDSH
CEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCC
PGDVLLIEKVDRLSRLPFEQWKVLKSKLVKANIHIVVVDQPMTHGILNGTEEHTMIAKVL
CCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCHHHHHHHHHH
TEFMIDLAAAMARDDYETRRKRQAQGIEKAKVLGKYLGRQPDNELRRNIRLLLDEGKSWS
HHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
QVQSLLKCSRSTIAKAAKWNEPNIMNLTSLKI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFIRAYLRASTDEQDANRARNELVQFSDSKNVRIASFYTETQSGAKIERPELGRLIMDSH
CEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCC
PGDVLLIEKVDRLSRLPFEQWKVLKSKLVKANIHIVVVDQPMTHGILNGTEEHTMIAKVL
CCCEEEHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCHHHHHHHHHH
TEFMIDLAAAMARDDYETRRKRQAQGIEKAKVLGKYLGRQPDNELRRNIRLLLDEGKSWS
HHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
QVQSLLKCSRSTIAKAAKWNEPNIMNLTSLKI
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2172207 [H]