Click here to switch to the map view.

The map label for this gene is yeeY [H]

Identifier: 126174252

GI number: 126174252

Start: 2351000

End: 2351908

Strand: Reverse

Name: yeeY [H]

Synonym: Sbal_2030

Alternate gene names: 126174252

Gene position: 2351908-2351000 (Counterclockwise)

Preceding gene: 126174253

Following gene: 126174243

Centisome position: 45.87

GC content: 47.63

Gene sequence:

>909_bases
ATGACTCGAGCTAAATCTACCTTAGAACAATGGCGTATTTTGCAAGCGGTCGTCGATTTTGGCGGCTATGCCCAAGCGGC
CGAAAAACTCAACAAGAGTCAATCGTCACTCAACCATGCGGTTGCCAAATTACAGCATCAATTAGGTATTGAACTACTCG
AAGTCAAAGGCCGTAAAGCCTATCTCACCCAGCAAGGCGAAGTACTGCTGCGCCGCTCACGGCATGTCACCCAAGCCGTC
AACGAGTTAGAACAGCTCGCGAGTAATCTCGAACAAGGGTGGGAGCCGACACTCACGATTGCCCGTGAAATTATCTATCC
GATGGAAAGCTTAGTGTGTGCCCTCAATGCGTTTCTGCCCCACAGCCGTGGCACTCGAATCATCATGCTGGACTCAGTGA
TCACCGGCACCCAAGAGCTCATTCTGCAGAGTAAAGTCGATATTGCTATCTGTGCAGGGGTGCCGCCTAAAGGGTATTTA
TCCGAGCCTTTATGTGAACAAGAACTCTACCTCGTTTGTCATCCAAGTCACCCACTCGCTGACTTAGGTTCGATTGAAGA
CGATAAGCTACTGGCACAGTATTTACAGTTAGTGATCAAAGATACCGGCGTGCAATCCAATATCGACATAGGCTGGCTCA
AAGCTGAGCAGCGCTGGACCGTTTCTAACTTCCACGAGGCAAAAGTCATTTTAAACCAAGGTATTGGTTTCTGTTGGATC
CCGTCTTTTTTAGTCCAAGAGGAATTGGCTTCGGGCAATTTAGTGCGTTTACATCTTGATGGCAGTCAAAAACGCCGCAT
CATGTTGAGCCTAGTGATCCCTAATCGGGATCAACAAGGACCAGCATCCAAACTGCTTGCCTCTTTGATTTTAAAACAGC
ATGGAATTGAACCGACGAATAACAATTAA

Upstream 100 bases:

>100_bases
GCAGTATGTCGTGAGAATGACTGACTCTATGATATTTAATTGAAAAAGTCGTAAGAAGTGGCCACTATAAGCCTCAATCT
ATCGTTTTTTTGAGATTATA

Downstream 100 bases:

>100_bases
TAGCAAGATAACCAAACGAGTTCTCAATTCGAGTGAGCAAGACGCTAAGAGCCTAGTGCTGACGCTGGCTTAGTGCTTAG
TGCTTAGTGCTTAGTGCTTA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTRAKSTLEQWRILQAVVDFGGYAQAAEKLNKSQSSLNHAVAKLQHQLGIELLEVKGRKAYLTQQGEVLLRRSRHVTQAV
NELEQLASNLEQGWEPTLTIAREIIYPMESLVCALNAFLPHSRGTRIIMLDSVITGTQELILQSKVDIAICAGVPPKGYL
SEPLCEQELYLVCHPSHPLADLGSIEDDKLLAQYLQLVIKDTGVQSNIDIGWLKAEQRWTVSNFHEAKVILNQGIGFCWI
PSFLVQEELASGNLVRLHLDGSQKRRIMLSLVIPNRDQQGPASKLLASLILKQHGIEPTNNN

Sequences:

>Translated_302_residues
MTRAKSTLEQWRILQAVVDFGGYAQAAEKLNKSQSSLNHAVAKLQHQLGIELLEVKGRKAYLTQQGEVLLRRSRHVTQAV
NELEQLASNLEQGWEPTLTIAREIIYPMESLVCALNAFLPHSRGTRIIMLDSVITGTQELILQSKVDIAICAGVPPKGYL
SEPLCEQELYLVCHPSHPLADLGSIEDDKLLAQYLQLVIKDTGVQSNIDIGWLKAEQRWTVSNFHEAKVILNQGIGFCWI
PSFLVQEELASGNLVRLHLDGSQKRRIMLSLVIPNRDQQGPASKLLASLILKQHGIEPTNNN
>Mature_301_residues
TRAKSTLEQWRILQAVVDFGGYAQAAEKLNKSQSSLNHAVAKLQHQLGIELLEVKGRKAYLTQQGEVLLRRSRHVTQAVN
ELEQLASNLEQGWEPTLTIAREIIYPMESLVCALNAFLPHSRGTRIIMLDSVITGTQELILQSKVDIAICAGVPPKGYLS
EPLCEQELYLVCHPSHPLADLGSIEDDKLLAQYLQLVIKDTGVQSNIDIGWLKAEQRWTVSNFHEAKVILNQGIGFCWIP
SFLVQEELASGNLVRLHLDGSQKRRIMLSLVIPNRDQQGPASKLLASLILKQHGIEPTNNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=255, Percent_Identity=31.3725490196078, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1789492, Length=282, Percent_Identity=25.531914893617, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1787949, Length=252, Percent_Identity=24.6031746031746, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786401, Length=265, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786508, Length=261, Percent_Identity=22.6053639846743, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790262, Length=185, Percent_Identity=28.1081081081081, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786448, Length=261, Percent_Identity=27.2030651340996, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33676; Mature: 33545

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAKSTLEQWRILQAVVDFGGYAQAAEKLNKSQSSLNHAVAKLQHQLGIELLEVKGRKA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEE
YLTQQGEVLLRRSRHVTQAVNELEQLASNLEQGWEPTLTIAREIIYPMESLVCALNAFLP
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
HSRGTRIIMLDSVITGTQELILQSKVDIAICAGVPPKGYLSEPLCEQELYLVCHPSHPLA
CCCCCEEEEECCHHHCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHH
DLGSIEDDKLLAQYLQLVIKDTGVQSNIDIGWLKAEQRWTVSNFHEAKVILNQGIGFCWI
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHH
PSFLVQEELASGNLVRLHLDGSQKRRIMLSLVIPNRDQQGPASKLLASLILKQHGIEPTN
HHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC
NN
CC
>Mature Secondary Structure 
TRAKSTLEQWRILQAVVDFGGYAQAAEKLNKSQSSLNHAVAKLQHQLGIELLEVKGRKA
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEE
YLTQQGEVLLRRSRHVTQAVNELEQLASNLEQGWEPTLTIAREIIYPMESLVCALNAFLP
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
HSRGTRIIMLDSVITGTQELILQSKVDIAICAGVPPKGYLSEPLCEQELYLVCHPSHPLA
CCCCCEEEEECCHHHCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCHH
DLGSIEDDKLLAQYLQLVIKDTGVQSNIDIGWLKAEQRWTVSNFHEAKVILNQGIGFCWI
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHH
PSFLVQEELASGNLVRLHLDGSQKRRIMLSLVIPNRDQQGPASKLLASLILKQHGIEPTN
HHHHHHHHHCCCCEEEEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC
NN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]