Click here to switch to the map view.

The map label for this gene is ssaL [H]

Identifier: 126174189

GI number: 126174189

Start: 2277058

End: 2278086

Strand: Direct

Name: ssaL [H]

Synonym: Sbal_1965

Alternate gene names: 126174189

Gene position: 2277058-2278086 (Clockwise)

Preceding gene: 126174188

Following gene: 126174190

Centisome position: 44.41

GC content: 48.49

Gene sequence:

>1029_bases
ATGGTGCGTATCGATGGTGCCAACGCTGTGGATTTTCATAACACAACGAGTGTAAACGAAACCCGTGGACAAGTGTTTCC
GGCAAACAATGCAACAGCCATGGCGGCCGCAGAATTAGCCGAAGTGCGTTCTGAAGCATTGGAAGAGACGATGGAAGGAT
TAAGTCTTGGATTAAGCAGCCATTTGAAAAAGCTAACTTCAGGTAAAGAGCCAACAGATCCCCGATTTACAGCACTCGAG
CAGTTGCTACAACAACTGGGAGACACGCAAGCAACCACAGTCAATAAGCTGGTCGAACAGTTTGCGAGCTTAGGCGAGGG
TAATGAGCTTCTCTCGCAACTTAAACAATTGGGCTTAGACAGCGGCAACATGATGCTATTAATGATGGCGCTAGTCGTGT
CAGGCAAGCTAGGTCAGTCCGCCCATAATAAGCTACGCAAATTATTAACAGAATTACTCGCGCAAGAAGGCGCTGAAATT
GCGTTATTTGCCGCCCTTGAAGGCGTTGCACTCGATCATGCTGGCCTGCAAGCCTTGCAACAACTTTATCAACAAGCGGT
GCGAGGCGATGCCAGCCTAGCCAAATGGTTTGAATTACTCCAACATCTTCCTGACCGCCGTAAGCGGATCCGTGTGTTAC
TAAGAGCCCTGTCTGAACCCCTGAGCGATCAGCACAGCGGGAGAAACATGGTCAAGATAGCTGCGGCGGTAGATGACTTA
CGCCGATTGCTTATTTTTCTCACCATAGAGGAACATTGCCATATGCTCGCCCGTGCGACTCAGCTTGATGGTGAACAAGT
GTTAAAAGTCACGTTACAACTAATAGAACAAGCTTGGGTGTATCCCCAGTGGATCGATGAACAAATACGGTTATTACCCT
TAATGCCCGCAAGACGATTGGGATTTCTACGCCGCTGGCGGGAACTGCTGAGTATTATTCCTCTGGCATGTTTTCGCGAT
CCAGAACAGAAAGAACATGTCGAAGAGGCCATGTTGAGCCTACTCGATGACTGGTGTGATCAGGAATAA

Upstream 100 bases:

>100_bases
TCGACTATGACAGCTAAGATAGATCTCAATGCACACTTACAGCAATTACTGGCGGCGTTTGTCCCAGAACCATTAAAGGG
CGTAGGCTAAGGAGCTTATT

Downstream 100 bases:

>100_bases
CGAGCGTCTGCTAATGCTCGCTTCACGCAGAACTCAGACAACTGTAATGACATCACTGGCAAGGCCTACACGCTGACCAA
GTGCAATACCGATACAGTAG

Product: TyeA family type III secretion effector delivery regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MVRIDGANAVDFHNTTSVNETRGQVFPANNATAMAAAELAEVRSEALEETMEGLSLGLSSHLKKLTSGKEPTDPRFTALE
QLLQQLGDTQATTVNKLVEQFASLGEGNELLSQLKQLGLDSGNMMLLMMALVVSGKLGQSAHNKLRKLLTELLAQEGAEI
ALFAALEGVALDHAGLQALQQLYQQAVRGDASLAKWFELLQHLPDRRKRIRVLLRALSEPLSDQHSGRNMVKIAAAVDDL
RRLLIFLTIEEHCHMLARATQLDGEQVLKVTLQLIEQAWVYPQWIDEQIRLLPLMPARRLGFLRRWRELLSIIPLACFRD
PEQKEHVEEAMLSLLDDWCDQE

Sequences:

>Translated_342_residues
MVRIDGANAVDFHNTTSVNETRGQVFPANNATAMAAAELAEVRSEALEETMEGLSLGLSSHLKKLTSGKEPTDPRFTALE
QLLQQLGDTQATTVNKLVEQFASLGEGNELLSQLKQLGLDSGNMMLLMMALVVSGKLGQSAHNKLRKLLTELLAQEGAEI
ALFAALEGVALDHAGLQALQQLYQQAVRGDASLAKWFELLQHLPDRRKRIRVLLRALSEPLSDQHSGRNMVKIAAAVDDL
RRLLIFLTIEEHCHMLARATQLDGEQVLKVTLQLIEQAWVYPQWIDEQIRLLPLMPARRLGFLRRWRELLSIIPLACFRD
PEQKEHVEEAMLSLLDDWCDQE
>Mature_342_residues
MVRIDGANAVDFHNTTSVNETRGQVFPANNATAMAAAELAEVRSEALEETMEGLSLGLSSHLKKLTSGKEPTDPRFTALE
QLLQQLGDTQATTVNKLVEQFASLGEGNELLSQLKQLGLDSGNMMLLMMALVVSGKLGQSAHNKLRKLLTELLAQEGAEI
ALFAALEGVALDHAGLQALQQLYQQAVRGDASLAKWFELLQHLPDRRKRIRVLLRALSEPLSDQHSGRNMVKIAAAVDDL
RRLLIFLTIEEHCHMLARATQLDGEQVLKVTLQLIEQAWVYPQWIDEQIRLLPLMPARRLGFLRRWRELLSIIPLACFRD
PEQKEHVEEAMLSLLDDWCDQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010812
- InterPro:   IPR013351 [H]

Pfam domain/function: PF07201 HrpJ [H]

EC number: NA

Molecular weight: Translated: 38278; Mature: 38278

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRIDGANAVDFHNTTSVNETRGQVFPANNATAMAAAELAEVRSEALEETMEGLSLGLSS
CEEECCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLKKLTSGKEPTDPRFTALEQLLQQLGDTQATTVNKLVEQFASLGEGNELLSQLKQLGLD
HHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
SGNMMLLMMALVVSGKLGQSAHNKLRKLLTELLAQEGAEIALFAALEGVALDHAGLQALQ
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH
QLYQQAVRGDASLAKWFELLQHLPDRRKRIRVLLRALSEPLSDQHSGRNMVKIAAAVDDL
HHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RRLLIFLTIEEHCHMLARATQLDGEQVLKVTLQLIEQAWVYPQWIDEQIRLLPLMPARRL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH
GFLRRWRELLSIIPLACFRDPEQKEHVEEAMLSLLDDWCDQE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVRIDGANAVDFHNTTSVNETRGQVFPANNATAMAAAELAEVRSEALEETMEGLSLGLSS
CEEECCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLKKLTSGKEPTDPRFTALEQLLQQLGDTQATTVNKLVEQFASLGEGNELLSQLKQLGLD
HHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
SGNMMLLMMALVVSGKLGQSAHNKLRKLLTELLAQEGAEIALFAALEGVALDHAGLQALQ
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH
QLYQQAVRGDASLAKWFELLQHLPDRRKRIRVLLRALSEPLSDQHSGRNMVKIAAAVDDL
HHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RRLLIFLTIEEHCHMLARATQLDGEQVLKVTLQLIEQAWVYPQWIDEQIRLLPLMPARRL
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH
GFLRRWRELLSIIPLACFRDPEQKEHVEEAMLSLLDDWCDQE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]