| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174187
Identifier: 126174187
GI number: 126174187
Start: 2275717
End: 2276397
Strand: Direct
Name: 126174187
Synonym: Sbal_1963
Alternate gene names: NA
Gene position: 2275717-2276397 (Clockwise)
Preceding gene: 126174186
Following gene: 126174188
Centisome position: 44.38
GC content: 48.6
Gene sequence:
>681_bases ATGGACGACTTGACCTCTAATCTACCACGAACATGGGGCGAAGCGACTGGTCAAAACACGTTAAATCGAGTGTTATCGCC TGCATTATTGACCTTTAATCGTCTCGTTTGGCAACCTGTTGCGACTATGCATCCGAGCTGGTGGCAAGAATTACAATTAA CCCTTTGGCAGGCACAGTATCAAGCCGGTACCCGCTTAGCGCAGCGAATTGAAGCGGTTGTGGTTTCCCGTTATGGTTTG GCAGACCAAGTTTTGCCAAGGGAACTTAATGACCTCGAGGCTAACCTATTAGTCTGCCAACATAAACTCAGTGCCATAGT GACGGCGTTGGGGCTTTTTCTCCTCAACCGCCCTGATTATGTGTCATTACGTGAATATCGTGATGCCTTGCGTCAAGAGT TAAGCAAGGCACAAATTCAGCAAATTTGGAATTTGTGGCCCCAGAGACCCCAACTTGCGACATATGACTATCGAGACGAA GTGACGGCGACAGAGTTAGTTAGTGTCGCCCAGGCTTGCGCCATTACCCTGATAGCACAATTATGGGGAAACAAACCGTT TTGGCGGGCATTAGCCTTGACCTTACCTGTGCCAGCAACTTTGCCATGTAAAGCGGACTCCTTAGCCCCCATGTCCTTGG ATATTCCTCGCTGGTTAATGAGATTGGAGCGACTACTATGA
Upstream 100 bases:
>100_bases TGCCGTTAGTGATCAGCTTATCGGGAATAATGCTATTCAGCATTGGCGGTATGTGGTGGATGAGACGCAAATAAACATAA CAATTGTTTCTGGAGGAACT
Downstream 100 bases:
>100_bases ACCCATTTTCAATTGAGGTGCGCGCCTGCGAGATCCGTCGTGAAGGCAACCATTTGATCAGTGCAACAGCGTTACATCGG GCGAGTGAGCTAGCGGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MDDLTSNLPRTWGEATGQNTLNRVLSPALLTFNRLVWQPVATMHPSWWQELQLTLWQAQYQAGTRLAQRIEAVVVSRYGL ADQVLPRELNDLEANLLVCQHKLSAIVTALGLFLLNRPDYVSLREYRDALRQELSKAQIQQIWNLWPQRPQLATYDYRDE VTATELVSVAQACAITLIAQLWGNKPFWRALALTLPVPATLPCKADSLAPMSLDIPRWLMRLERLL
Sequences:
>Translated_226_residues MDDLTSNLPRTWGEATGQNTLNRVLSPALLTFNRLVWQPVATMHPSWWQELQLTLWQAQYQAGTRLAQRIEAVVVSRYGL ADQVLPRELNDLEANLLVCQHKLSAIVTALGLFLLNRPDYVSLREYRDALRQELSKAQIQQIWNLWPQRPQLATYDYRDE VTATELVSVAQACAITLIAQLWGNKPFWRALALTLPVPATLPCKADSLAPMSLDIPRWLMRLERLL >Mature_226_residues MDDLTSNLPRTWGEATGQNTLNRVLSPALLTFNRLVWQPVATMHPSWWQELQLTLWQAQYQAGTRLAQRIEAVVVSRYGL ADQVLPRELNDLEANLLVCQHKLSAIVTALGLFLLNRPDYVSLREYRDALRQELSKAQIQQIWNLWPQRPQLATYDYRDE VTATELVSVAQACAITLIAQLWGNKPFWRALALTLPVPATLPCKADSLAPMSLDIPRWLMRLERLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25854; Mature: 25854
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLTSNLPRTWGEATGQNTLNRVLSPALLTFNRLVWQPVATMHPSWWQELQLTLWQAQY CCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QAGTRLAQRIEAVVVSRYGLADQVLPRELNDLEANLLVCQHKLSAIVTALGLFLLNRPDY HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VSLREYRDALRQELSKAQIQQIWNLWPQRPQLATYDYRDEVTATELVSVAQACAITLIAQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LWGNKPFWRALALTLPVPATLPCKADSLAPMSLDIPRWLMRLERLL HHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC >Mature Secondary Structure MDDLTSNLPRTWGEATGQNTLNRVLSPALLTFNRLVWQPVATMHPSWWQELQLTLWQAQY CCCHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QAGTRLAQRIEAVVVSRYGLADQVLPRELNDLEANLLVCQHKLSAIVTALGLFLLNRPDY HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VSLREYRDALRQELSKAQIQQIWNLWPQRPQLATYDYRDEVTATELVSVAQACAITLIAQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LWGNKPFWRALALTLPVPATLPCKADSLAPMSLDIPRWLMRLERLL HHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA