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The map label for this gene is 126174171

Identifier: 126174171

GI number: 126174171

Start: 2263271

End: 2264476

Strand: Direct

Name: 126174171

Synonym: Sbal_1947

Alternate gene names: NA

Gene position: 2263271-2264476 (Clockwise)

Preceding gene: 126174170

Following gene: 126174172

Centisome position: 44.14

GC content: 44.94

Gene sequence:

>1206_bases
ATGTCTTCAGGATACAAGCTCTTATGGTTAAACGGTCCATTGCAAGGACGAGAGTTATCTTTGCCTCTTGGCAGCTTAAG
CATAGGACCCGATGGTGATGTGTTAGCCACACTCGAACACGCTGAACAAGTGGATTTATTGATCGATGAAATGGGGGTTC
GGCTGCAGTCTTGGGTACCGACTTGGATAGCAGGACAGCTTGTTAGCGAAGTCAACATGTTGCCATTGGGGCAAGCAATT
GAACTCGCAGGTGTGGGTATCCTCTTAGGTCACAGCAGCGATGAATTAAAGCAACAGGCAATGCCATCACATTGTCAAAC
AAAGGCAAAGAAGTCGTGGTGGTTACTGGCGACAGTTTCAATGCTCTCTATGGTGCTATTAACGACAGTGTTATTAGCGC
CTGCGAAGATGCCTATCGTCGAGTTGACACAAGCACAATGGTTATCGCAGCAGTTGCAGACCGATGGTTTAAACGGAGTT
CAAGCTCATTGGTCAAAGGATGGCGTGGTGACGCTGAGCGGCTTTTGCCAAGATTCACAACGTATGGCGCGGTTTCTTGG
TGACATCAAAGGACAAGGTATTTTATTTATAGAGCAGACCACTTGCGGCGATCAGTTGATACGTAATGTCAAAGATGTCT
TAGTCCAAAATGGGTTTGCCAATGCCCTTGTAACCCTAGCTAGTGAGCCTGGTAATGTCATCATTTCGGGCGCGATTCAA
TCAGGGGAGCCCTGGGATAAAGCAGTGTCTAGCTTGAATAACTTGCCCGGACTCGTTAATTGGCAAGTTAGCAATCAGGT
TGACAGTCAACTCAAACCGCTCATCTGCGCGTTGCGAAACAAAAATTTACTCGTCGGTCTCATGATAGAAAGGATCAATG
ATGCCATTGTCATGACGGGTAAAGTCAGTGAACAACAACAGCAACAGATCATGGCTGTCGCGCAAGGATTAGAACCAACG
CATGCCAGTGGATTGAAATTAGTATTTCAAAATATTCCAGTACGAGACGAACTTAATCATTTATTAAATGCTTCTGTGGT
GACCTATGGTGGTAATGCACAGTCTCCATTCATAGAGTTATCGAGTGGTGTTCGGTTATCAACAGGGAGCAAATTAGATA
ATGGTTATGTCGTGGAGTATATGAACATTCATGGATTAGATCTCAGTAGAGCCGGTGAGTTAATTCATGTACCACTTATT
TTTTAG

Upstream 100 bases:

>100_bases
CCACTGCTGGGCGGTTTGTTTAGAAGTACAGATCACCACACTCAAAGCGTGATGCGTCTGTTCCTGATCAAAGCGGAACC
CGTTAACCAAGGAGATTAAT

Downstream 100 bases:

>100_bases
GAGGCATTATGTCAAGAATTACACAGCTTGAGGATGATATCAAATTACATAATTATAAACAGGAGGCTTACCATAATAGA
CTAGCTAAAATGCGCAGTAA

Product: YscD/HrpQ family type III secretion apparatus protein

Products: NA

Alternate protein names: Type III Secretion Apparatus Protein; YscD/HrpQ Family Type III Secretion Apparatus Protein; Type III Secretion Apparatus; Type III Secretion Apparatus Protein YscD/HrpQ Family; Type III Export Protein PscD; Pathogenicity Island Protein

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSSGYKLLWLNGPLQGRELSLPLGSLSIGPDGDVLATLEHAEQVDLLIDEMGVRLQSWVPTWIAGQLVSEVNMLPLGQAI
ELAGVGILLGHSSDELKQQAMPSHCQTKAKKSWWLLATVSMLSMVLLTTVLLAPAKMPIVELTQAQWLSQQLQTDGLNGV
QAHWSKDGVVTLSGFCQDSQRMARFLGDIKGQGILFIEQTTCGDQLIRNVKDVLVQNGFANALVTLASEPGNVIISGAIQ
SGEPWDKAVSSLNNLPGLVNWQVSNQVDSQLKPLICALRNKNLLVGLMIERINDAIVMTGKVSEQQQQQIMAVAQGLEPT
HASGLKLVFQNIPVRDELNHLLNASVVTYGGNAQSPFIELSSGVRLSTGSKLDNGYVVEYMNIHGLDLSRAGELIHVPLI
F

Sequences:

>Translated_401_residues
MSSGYKLLWLNGPLQGRELSLPLGSLSIGPDGDVLATLEHAEQVDLLIDEMGVRLQSWVPTWIAGQLVSEVNMLPLGQAI
ELAGVGILLGHSSDELKQQAMPSHCQTKAKKSWWLLATVSMLSMVLLTTVLLAPAKMPIVELTQAQWLSQQLQTDGLNGV
QAHWSKDGVVTLSGFCQDSQRMARFLGDIKGQGILFIEQTTCGDQLIRNVKDVLVQNGFANALVTLASEPGNVIISGAIQ
SGEPWDKAVSSLNNLPGLVNWQVSNQVDSQLKPLICALRNKNLLVGLMIERINDAIVMTGKVSEQQQQQIMAVAQGLEPT
HASGLKLVFQNIPVRDELNHLLNASVVTYGGNAQSPFIELSSGVRLSTGSKLDNGYVVEYMNIHGLDLSRAGELIHVPLI
F
>Mature_400_residues
SSGYKLLWLNGPLQGRELSLPLGSLSIGPDGDVLATLEHAEQVDLLIDEMGVRLQSWVPTWIAGQLVSEVNMLPLGQAIE
LAGVGILLGHSSDELKQQAMPSHCQTKAKKSWWLLATVSMLSMVLLTTVLLAPAKMPIVELTQAQWLSQQLQTDGLNGVQ
AHWSKDGVVTLSGFCQDSQRMARFLGDIKGQGILFIEQTTCGDQLIRNVKDVLVQNGFANALVTLASEPGNVIISGAIQS
GEPWDKAVSSLNNLPGLVNWQVSNQVDSQLKPLICALRNKNLLVGLMIERINDAIVMTGKVSEQQQQQIMAVAQGLEPTH
ASGLKLVFQNIPVRDELNHLLNASVVTYGGNAQSPFIELSSGVRLSTGSKLDNGYVVEYMNIHGLDLSRAGELIHVPLIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43418; Mature: 43287

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGYKLLWLNGPLQGRELSLPLGSLSIGPDGDVLATLEHAEQVDLLIDEMGVRLQSWVP
CCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHCCC
TWIAGQLVSEVNMLPLGQAIELAGVGILLGHSSDELKQQAMPSHCQTKAKKSWWLLATVS
HHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCHHHHHHHHCCHHHHHHHCCCCHHHHHHH
MLSMVLLTTVLLAPAKMPIVELTQAQWLSQQLQTDGLNGVQAHWSKDGVVTLSGFCQDSQ
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHH
RMARFLGDIKGQGILFIEQTTCGDQLIRNVKDVLVQNGFANALVTLASEPGNVIISGAIQ
HHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHEEEEEECCCCCEEEEECCC
SGEPWDKAVSSLNNLPGLVNWQVSNQVDSQLKPLICALRNKNLLVGLMIERINDAIVMTG
CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHCCCEEEEEC
KVSEQQQQQIMAVAQGLEPTHASGLKLVFQNIPVRDELNHLLNASVVTYGGNAQSPFIEL
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCEEEE
SSGVRLSTGSKLDNGYVVEYMNIHGLDLSRAGELIHVPLIF
CCCEEECCCCCCCCCEEEEEEEECCCCHHCCCCEEEEEEEC
>Mature Secondary Structure 
SSGYKLLWLNGPLQGRELSLPLGSLSIGPDGDVLATLEHAEQVDLLIDEMGVRLQSWVP
CCCCEEEEECCCCCCCEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCHHHHCCC
TWIAGQLVSEVNMLPLGQAIELAGVGILLGHSSDELKQQAMPSHCQTKAKKSWWLLATVS
HHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCHHHHHHHHCCHHHHHHHCCCCHHHHHHH
MLSMVLLTTVLLAPAKMPIVELTQAQWLSQQLQTDGLNGVQAHWSKDGVVTLSGFCQDSQ
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHH
RMARFLGDIKGQGILFIEQTTCGDQLIRNVKDVLVQNGFANALVTLASEPGNVIISGAIQ
HHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHEEEEEECCCCCEEEEECCC
SGEPWDKAVSSLNNLPGLVNWQVSNQVDSQLKPLICALRNKNLLVGLMIERINDAIVMTG
CCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEHHHHHCCCEEEEEC
KVSEQQQQQIMAVAQGLEPTHASGLKLVFQNIPVRDELNHLLNASVVTYGGNAQSPFIEL
CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCEEEE
SSGVRLSTGSKLDNGYVVEYMNIHGLDLSRAGELIHVPLIF
CCCEEECCCCCCCCCEEEEEEEECCCCHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA