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The map label for this gene is insF1 [C]

Identifier: 126174166

GI number: 126174166

Start: 2256454

End: 2257518

Strand: Direct

Name: insF1 [C]

Synonym: Sbal_1942

Alternate gene names: 126174166

Gene position: 2256454-2257518 (Clockwise)

Preceding gene: 126174165

Following gene: 126174167

Centisome position: 44.01

GC content: 45.16

Gene sequence:

>1065_bases
TTGGAAGGAAAAAGAGGAAGACTGATTTCGCTGACCGATAGGCAGAAGCATGCGCAGTGGATCTGCACAGCAGTAGCATC
AGGCGCAAGACAAGATAAGGCCTGTGACGTGATTGGATTATCAAGTAGAACCTTGCAGCGTTGGCGAATAGACGGTGACA
TTAGCGCAGATAAAAGGCCAACGGCAACGAGGCCGGAGCCTGGAAATAAACTGAGTCAAGCAGAAAGACAAGCCGTGATT
GATGTGTGTAATAGTGAAGAGTTTGCCTCATTACCACCAAGCCAAATTGTCCCGATACTCGCCGATAGAGGTGAGTATAT
TGCTTCGGAGTCGAGTTTTTACCGTGTATTGCATACTGAAAACATGCTGCACCACCGAGGCAAAGCTAAGCCGAGAAATG
TTCATAAAAAGCCAACCAGTTATACGGCTAAAAAAGCGAACGAAGTGTGGAGTTGGGATATCAGTTACCTGCCTACAACG
GTGATAGGAAAACACTATTATCTGTACATGATTGAAGATATTTACAGTCGAAAAATCGTTGGTTGGGAAGTTCACGACAG
TGAAACCGGCGAGCAAGCAGCAGCACTACTAGAGCGCACCGTCTGGTCAGAGAAATGCTTAAAGAAAGACGTTGTGTTGC
ACTCAGATAATGGCGCGCCCATGAAGAGCCTGACGATGCGAGCTAAGATGTACGATTTAGGCGTTGTGACCTCACGAAGC
CGTCCAAGGGTAAGTAATGATAATCCGTACTCAGAATCACTATTTAGAACGGTAAAGTATCATCCACGTTGGCCTAGTGA
AGGTTTTAAGTCATTAGAAGCAGCACGTAAATGGGTCAATGAATTTGTTTATTGGTACAACAACGAGCATCGCCATAGCA
GGATTAAGTTTGTGACACCAAACCAAAGGCATGATGGTCTTGATGTTGGAATACTGGCGAAGCGAAAAGCGTTGTATCAG
ACAAAAAGAAATGAACATCCAAAGCGATGGTCAAAAGAAGAGCGAAACTGGCAGCCAATAGGCGCTGTGGAGTTAAATCC
AGAGCAACATAAAGAAGCTGCTTAA

Upstream 100 bases:

>100_bases
AAAAACGCATTAACGAGCTAGAACGTGAGTTACGTAGAAAGGATAAAGCGTTAGCGGAAGCGGCTGCTTTACTCGTACTC
GGAAAAAAGTTCGATGCCTA

Downstream 100 bases:

>100_bases
CAATTTAAGCGACAACTGTCTTGAAAAACGCCGTAACTACCAGAACTGATTAACTCCTTATTTCTTAAAGGTTAAACGGG
TTTTAATACTGTTAAGGGAT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Integrase; ISRin3 Transposase; Transposase IS3 Family; ISPsy11 Transposase OrfB; Integrase Catalytic Domain-Containing Protein; Transposase Degenerate; Transposase Of; IS5 Family Transposase OrfB; Transposase For Insertion Sequence Element; Helix-Turn-Helix Domain-Containing Protein Fis-Type; LOW QUALITY PROTEIN Transposase; Transposase ORFB; ISCja1 Transposase OrfB; Transposase OrfB; Transposase InsF; ISHne1 Transposase; Transposase-Like Protein; Helix-Turn-Helix Domain Containing Protein Fis-Type; Transposase For Insertion Sequence Element IS-LL6B; ISEch2 OrfB; Isrso8-Transposase Orfb Protein; Integrase Catalytic Domain; Transposase OrfB For Insertion Sequence Element; IS3 Family Transposase; IS3 Family Transposase OrfB

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MEGKRGRLISLTDRQKHAQWICTAVASGARQDKACDVIGLSSRTLQRWRIDGDISADKRPTATRPEPGNKLSQAERQAVI
DVCNSEEFASLPPSQIVPILADRGEYIASESSFYRVLHTENMLHHRGKAKPRNVHKKPTSYTAKKANEVWSWDISYLPTT
VIGKHYYLYMIEDIYSRKIVGWEVHDSETGEQAAALLERTVWSEKCLKKDVVLHSDNGAPMKSLTMRAKMYDLGVVTSRS
RPRVSNDNPYSESLFRTVKYHPRWPSEGFKSLEAARKWVNEFVYWYNNEHRHSRIKFVTPNQRHDGLDVGILAKRKALYQ
TKRNEHPKRWSKEERNWQPIGAVELNPEQHKEAA

Sequences:

>Translated_354_residues
MEGKRGRLISLTDRQKHAQWICTAVASGARQDKACDVIGLSSRTLQRWRIDGDISADKRPTATRPEPGNKLSQAERQAVI
DVCNSEEFASLPPSQIVPILADRGEYIASESSFYRVLHTENMLHHRGKAKPRNVHKKPTSYTAKKANEVWSWDISYLPTT
VIGKHYYLYMIEDIYSRKIVGWEVHDSETGEQAAALLERTVWSEKCLKKDVVLHSDNGAPMKSLTMRAKMYDLGVVTSRS
RPRVSNDNPYSESLFRTVKYHPRWPSEGFKSLEAARKWVNEFVYWYNNEHRHSRIKFVTPNQRHDGLDVGILAKRKALYQ
TKRNEHPKRWSKEERNWQPIGAVELNPEQHKEAA
>Mature_354_residues
MEGKRGRLISLTDRQKHAQWICTAVASGARQDKACDVIGLSSRTLQRWRIDGDISADKRPTATRPEPGNKLSQAERQAVI
DVCNSEEFASLPPSQIVPILADRGEYIASESSFYRVLHTENMLHHRGKAKPRNVHKKPTSYTAKKANEVWSWDISYLPTT
VIGKHYYLYMIEDIYSRKIVGWEVHDSETGEQAAALLERTVWSEKCLKKDVVLHSDNGAPMKSLTMRAKMYDLGVVTSRS
RPRVSNDNPYSESLFRTVKYHPRWPSEGFKSLEAARKWVNEFVYWYNNEHRHSRIKFVTPNQRHDGLDVGILAKRKALYQ
TKRNEHPKRWSKEERNWQPIGAVELNPEQHKEAA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788405, Length=179, Percent_Identity=27.3743016759777, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1787263, Length=179, Percent_Identity=27.3743016759777, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1786753, Length=179, Percent_Identity=27.3743016759777, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1786570, Length=179, Percent_Identity=27.3743016759777, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1786490, Length=179, Percent_Identity=27.3743016759777, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40879; Mature: 40879

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGKRGRLISLTDRQKHAQWICTAVASGARQDKACDVIGLSSRTLQRWRIDGDISADKRP
CCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHEECCCCCCCCCCC
TATRPEPGNKLSQAERQAVIDVCNSEEFASLPPSQIVPILADRGEYIASESSFYRVLHTE
CCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCCCCCEECCCHHEEHHHHH
NMLHHRGKAKPRNVHKKPTSYTAKKANEVWSWDISYLPTTVIGKHYYLYMIEDIYSRKIV
HHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHCCHHHHCCEEEEEEEHHHHCCCEE
GWEVHDSETGEQAAALLERTVWSEKCLKKDVVLHSDNGAPMKSLTMRAKMYDLGVVTSRS
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHCEEEECCC
RPRVSNDNPYSESLFRTVKYHPRWPSEGFKSLEAARKWVNEFVYWYNNEHRHSRIKFVTP
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
NQRHDGLDVGILAKRKALYQTKRNEHPKRWSKEERNWQPIGAVELNPEQHKEAA
CCCCCCCCEEHHHHHHHHHHHHCCCCCHHHCHHHCCCCCCCEEECCHHHHCCCC
>Mature Secondary Structure
MEGKRGRLISLTDRQKHAQWICTAVASGARQDKACDVIGLSSRTLQRWRIDGDISADKRP
CCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHEECCCCCCCCCCC
TATRPEPGNKLSQAERQAVIDVCNSEEFASLPPSQIVPILADRGEYIASESSFYRVLHTE
CCCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCCCCCEECCCHHEEHHHHH
NMLHHRGKAKPRNVHKKPTSYTAKKANEVWSWDISYLPTTVIGKHYYLYMIEDIYSRKIV
HHHHHCCCCCCCCCCCCCCCHHHHHCCCCEEEEHHHCCHHHHCCEEEEEEEHHHHCCCEE
GWEVHDSETGEQAAALLERTVWSEKCLKKDVVLHSDNGAPMKSLTMRAKMYDLGVVTSRS
EEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHCEEEECCC
RPRVSNDNPYSESLFRTVKYHPRWPSEGFKSLEAARKWVNEFVYWYNNEHRHSRIKFVTP
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
NQRHDGLDVGILAKRKALYQTKRNEHPKRWSKEERNWQPIGAVELNPEQHKEAA
CCCCCCCCEEHHHHHHHHHHHHCCCCCHHHCHHHCCCCCCCEEECCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA