Click here to switch to the map view.

The map label for this gene is qseC [H]

Identifier: 126174121

GI number: 126174121

Start: 2195475

End: 2196872

Strand: Direct

Name: qseC [H]

Synonym: Sbal_1895

Alternate gene names: 126174121

Gene position: 2195475-2196872 (Clockwise)

Preceding gene: 126174120

Following gene: 126174122

Centisome position: 42.82

GC content: 46.64

Gene sequence:

>1398_bases
GTGATTCGATTAAAGGGGCTGGATGTGTATTCACTGCGTTTGGTACTGACATTATTGATTTTGTCAGGTATTTCAGTGTC
CGTTGCTGTCTCTAGCTGGTTGAGTACTCGGGATTCTAAGCATCAAATTGAAGAACTCTTCGATGCGCAAATGCTGCAAA
CCGCGAAAATGCTGGAGCTGTTTTATCACACTGAGCCCGGTGCGACGTCCCAGAGTACCGCAAGACCGCAAGTGCTCCAC
GTTCCCGATAGCCAGATCAGTTCCTTTGCCGAGAAAGCCGATGCCCTGAAACTCGCCTATGAGCATAAATTGGCGTTTCA
AATTTGGAGTGAGGCGGGCGAAGCCTTAGTGCTGTCGGACAATATTGGCCATCAACCTATCACCCGATTCGTGCAGGGTT
ATCACAAGAAAGTGTTCGAAGGTGAACTCTGGCATGTGTTCAGTTTTTTCTCGGTCAAAAATCATGTTTGGATTGTCACC
GCTCAGCAGGATGAAGTGCGCCAAGAGCTCGTATCACAAATCATGCATAACGCGGTTATCGTGCCCTTGATTGTGGTGCC
TTTGACACTACTTATCGTTAGCTTATTGTTTTATCTATTGTTCCGGCCGTTAAAAACCTTCGAAAGGGAGTTGATTGGGC
GGGCGCCGAACGATCTCACGCCGCTGACTATGTCACTACCGAAAGAACTCGTACCTGTTCGACGCGCATTAAACTTATAT
ATCAATAGCATAGCTAGATTCATTGCCCGTGAACGCCGTTTTAGCGCCGATGCCGCCCATGAACTTAAAACACCATTATC
TGTGATTAAATTACATCAACACGGTTTAGAGAGCCTGATTGACGATGATCCACAGCAGAAATTTCATCTAGCTGCGATTG
ATGCCGGCGTGGTGCACATGAGTCATACCGTTGAACAGTTACTGGTGTTAGCAAGGGTGGATTCAATAAATGAGCTCAAT
GTGTCATCCCACGCTATCTTGCCTATGGTTGAAGATGCGCTTAATCAATTGATGCCACAAATCACCGATTATGAATGGAA
TATCGATATCGCGCCCCAGCTGACCGTGACTTGCGATCGGTTCTATCTGCTGCTGGTGCTAAAAAATATTATCGAAAATG
CCTGCAAATACAGCCCGCAGGAATCAGAAATCTCAGTGTCGGCCCATTCACTGGGTGATGAGATTAGTATCTGTATTGCG
GATCGTGGCCAAGGCATGACAGAAGAGCAGATTGCTAATGCCACAGAGCGTTTTTATCGTGTGAATGAAAATGAAGGCAT
AGGTGCGGGTTTAGGTTTGTCTATCTGCCATCACATCATTGAATTGCACCAAGGCCGTTTAGTGATAGCGCCAAGGGAGC
AGGGCGGATTATCTGTGACTCTTTTTTTGCCGCAATAG

Upstream 100 bases:

>100_bases
TGATTGAAATAAATTAATTCACTGAATTAAGTGACAATACTCACGTTTGTGGGTATTGATATCTCAGTCATTCGCTGAGG
GTAAACGTTAGGAAACTGAA

Downstream 100 bases:

>100_bases
TTCAGAAGTTAACATCTTAAAATAGATCCGCAGTTTAAGTGACATCACCTCAGTGGTTTTGATACATTTGGGTGAGTGTA
ATTGTGCGTTTGTCTGCTAT

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MIRLKGLDVYSLRLVLTLLILSGISVSVAVSSWLSTRDSKHQIEELFDAQMLQTAKMLELFYHTEPGATSQSTARPQVLH
VPDSQISSFAEKADALKLAYEHKLAFQIWSEAGEALVLSDNIGHQPITRFVQGYHKKVFEGELWHVFSFFSVKNHVWIVT
AQQDEVRQELVSQIMHNAVIVPLIVVPLTLLIVSLLFYLLFRPLKTFERELIGRAPNDLTPLTMSLPKELVPVRRALNLY
INSIARFIARERRFSADAAHELKTPLSVIKLHQHGLESLIDDDPQQKFHLAAIDAGVVHMSHTVEQLLVLARVDSINELN
VSSHAILPMVEDALNQLMPQITDYEWNIDIAPQLTVTCDRFYLLLVLKNIIENACKYSPQESEISVSAHSLGDEISICIA
DRGQGMTEEQIANATERFYRVNENEGIGAGLGLSICHHIIELHQGRLVIAPREQGGLSVTLFLPQ

Sequences:

>Translated_465_residues
MIRLKGLDVYSLRLVLTLLILSGISVSVAVSSWLSTRDSKHQIEELFDAQMLQTAKMLELFYHTEPGATSQSTARPQVLH
VPDSQISSFAEKADALKLAYEHKLAFQIWSEAGEALVLSDNIGHQPITRFVQGYHKKVFEGELWHVFSFFSVKNHVWIVT
AQQDEVRQELVSQIMHNAVIVPLIVVPLTLLIVSLLFYLLFRPLKTFERELIGRAPNDLTPLTMSLPKELVPVRRALNLY
INSIARFIARERRFSADAAHELKTPLSVIKLHQHGLESLIDDDPQQKFHLAAIDAGVVHMSHTVEQLLVLARVDSINELN
VSSHAILPMVEDALNQLMPQITDYEWNIDIAPQLTVTCDRFYLLLVLKNIIENACKYSPQESEISVSAHSLGDEISICIA
DRGQGMTEEQIANATERFYRVNENEGIGAGLGLSICHHIIELHQGRLVIAPREQGGLSVTLFLPQ
>Mature_465_residues
MIRLKGLDVYSLRLVLTLLILSGISVSVAVSSWLSTRDSKHQIEELFDAQMLQTAKMLELFYHTEPGATSQSTARPQVLH
VPDSQISSFAEKADALKLAYEHKLAFQIWSEAGEALVLSDNIGHQPITRFVQGYHKKVFEGELWHVFSFFSVKNHVWIVT
AQQDEVRQELVSQIMHNAVIVPLIVVPLTLLIVSLLFYLLFRPLKTFERELIGRAPNDLTPLTMSLPKELVPVRRALNLY
INSIARFIARERRFSADAAHELKTPLSVIKLHQHGLESLIDDDPQQKFHLAAIDAGVVHMSHTVEQLLVLARVDSINELN
VSSHAILPMVEDALNQLMPQITDYEWNIDIAPQLTVTCDRFYLLLVLKNIIENACKYSPQESEISVSAHSLGDEISICIA
DRGQGMTEEQIANATERFYRVNENEGIGAGLGLSICHHIIELHQGRLVIAPREQGGLSVTLFLPQ

Specific function: Member of a two-component regulatory system qseB/qseC. Activates the flagella regulon by activating transcription of flhDC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=463, Percent_Identity=30.8855291576674, Blast_Score=166, Evalue=4e-42,
Organism=Escherichia coli, GI1790551, Length=285, Percent_Identity=32.280701754386, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1788393, Length=255, Percent_Identity=28.2352941176471, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1788279, Length=293, Percent_Identity=27.3037542662116, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=27.3913043478261, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1786912, Length=212, Percent_Identity=29.2452830188679, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790346, Length=253, Percent_Identity=26.4822134387352, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1786783, Length=303, Percent_Identity=23.1023102310231, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787374, Length=277, Percent_Identity=24.5487364620939, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87082128, Length=295, Percent_Identity=25.4237288135593, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790436, Length=217, Percent_Identity=30.4147465437788, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789808, Length=323, Percent_Identity=22.9102167182663, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790861, Length=209, Percent_Identity=22.9665071770335, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 52274; Mature: 52274

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLKGLDVYSLRLVLTLLILSGISVSVAVSSWLSTRDSKHQIEELFDAQMLQTAKMLEL
CEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FYHTEPGATSQSTARPQVLHVPDSQISSFAEKADALKLAYEHKLAFQIWSEAGEALVLSD
HHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
NIGHQPITRFVQGYHKKVFEGELWHVFSFFSVKNHVWIVTAQQDEVRQELVSQIMHNAVI
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHH
VPLIVVPLTLLIVSLLFYLLFRPLKTFERELIGRAPNDLTPLTMSLPKELVPVRRALNLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHH
INSIARFIARERRFSADAAHELKTPLSVIKLHQHGLESLIDDDPQQKFHLAAIDAGVVHM
HHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHH
SHTVEQLLVLARVDSINELNVSSHAILPMVEDALNQLMPQITDYEWNIDIAPQLTVTCDR
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECEEECCCEEEHHHH
FYLLLVLKNIIENACKYSPQESEISVSAHSLGDEISICIADRGQGMTEEQIANATERFYR
HHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHEE
VNENEGIGAGLGLSICHHIIELHQGRLVIAPREQGGLSVTLFLPQ
CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MIRLKGLDVYSLRLVLTLLILSGISVSVAVSSWLSTRDSKHQIEELFDAQMLQTAKMLEL
CEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FYHTEPGATSQSTARPQVLHVPDSQISSFAEKADALKLAYEHKLAFQIWSEAGEALVLSD
HHCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
NIGHQPITRFVQGYHKKVFEGELWHVFSFFSVKNHVWIVTAQQDEVRQELVSQIMHNAVI
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHH
VPLIVVPLTLLIVSLLFYLLFRPLKTFERELIGRAPNDLTPLTMSLPKELVPVRRALNLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHH
INSIARFIARERRFSADAAHELKTPLSVIKLHQHGLESLIDDDPQQKFHLAAIDAGVVHM
HHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHH
SHTVEQLLVLARVDSINELNVSSHAILPMVEDALNQLMPQITDYEWNIDIAPQLTVTCDR
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECEEECCCEEEHHHH
FYLLLVLKNIIENACKYSPQESEISVSAHSLGDEISICIADRGQGMTEEQIANATERFYR
HHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHEE
VNENEGIGAGLGLSICHHIIELHQGRLVIAPREQGGLSVTLFLPQ
CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796; 11929534 [H]