| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174087
Identifier: 126174087
GI number: 126174087
Start: 2160591
End: 2161319
Strand: Direct
Name: 126174087
Synonym: Sbal_1861
Alternate gene names: NA
Gene position: 2160591-2161319 (Clockwise)
Preceding gene: 126174086
Following gene: 126174088
Centisome position: 42.14
GC content: 49.66
Gene sequence:
>729_bases ATGCTTGAACATCAACAAAAGCCTCCCCGTTCTACCTCGCGATTTTCCTCTTCTAAATTAACAGGTTTAGCTGCCAGCGG TGTACCAAGCCGTGGCTTGTTTATTATCGAGCTGGTGGTGGCGTTACTCATCACTCGCATTCCCTATTTAAGCGTGCCGT TTAAATGGCTTGAAAGCTATTTCCATGAATTGTCCCACGGCATTGCGACGATATTAAGCTCGGGTGTGGTCAGCCATATT CAATTGTTTCCTAACGGCGCAGGCTTTTGTTTTAGCCAAGGCGGCTCGCCGATGTTGATTGGTTTTGCTGGGTATTTTGG CGCGGCCTGTTGGGGATATTTAATCTACTTGCTCGCGACTTGGCCAAAAGGGATCCGCGTGAGCTTTGCCTTGCTGGGCG CTTTAGTGGTGCTAAGCGGCTTGCTTTGGGGAAGGGATATCCTCACGCTGGCGATTCTAGCCGTACTCACTATTATTTTG TTGTTACCGCTTAAACTCAGTCAAAACAAGATGTTGACCCAGTTTCTACGTATTGTTGGCTTGATGATTATGCTCAATGC GCTGGCAAGTCCAACTGTGTTGCTCGGGCTTGATGGCCAAGGTGATGCGGTGATGTTGGCCGAACGTTCTTGGATCCCCG CGTGGATTTGGGTGGGACTTTGGTTATTAACCAGTGCCTGCGCCTTGTATTTTGCGTGGCGCCGTGTCGATAACGCTGCG AGTCGCTAA
Upstream 100 bases:
>100_bases CAAGATACGCGTGGCCATCAGGGGGCGATAGCCCAATATTTACAAACTCAACATGCCGCCAAACGCGATGAAATTCAGCA AATGGTTGGCGTGGACTTGT
Downstream 100 bases:
>100_bases TCATCAAGGTCATTTAATACCTCAGGCGTATTGTGTTTCCTCTGGCTTTTATCCGCTTTGCTCTTGATTGGTTTAGATGA AGGTGAATTGACTCATCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MLEHQQKPPRSTSRFSSSKLTGLAASGVPSRGLFIIELVVALLITRIPYLSVPFKWLESYFHELSHGIATILSSGVVSHI QLFPNGAGFCFSQGGSPMLIGFAGYFGAACWGYLIYLLATWPKGIRVSFALLGALVVLSGLLWGRDILTLAILAVLTIIL LLPLKLSQNKMLTQFLRIVGLMIMLNALASPTVLLGLDGQGDAVMLAERSWIPAWIWVGLWLLTSACALYFAWRRVDNAA SR
Sequences:
>Translated_242_residues MLEHQQKPPRSTSRFSSSKLTGLAASGVPSRGLFIIELVVALLITRIPYLSVPFKWLESYFHELSHGIATILSSGVVSHI QLFPNGAGFCFSQGGSPMLIGFAGYFGAACWGYLIYLLATWPKGIRVSFALLGALVVLSGLLWGRDILTLAILAVLTIIL LLPLKLSQNKMLTQFLRIVGLMIMLNALASPTVLLGLDGQGDAVMLAERSWIPAWIWVGLWLLTSACALYFAWRRVDNAA SR >Mature_242_residues MLEHQQKPPRSTSRFSSSKLTGLAASGVPSRGLFIIELVVALLITRIPYLSVPFKWLESYFHELSHGIATILSSGVVSHI QLFPNGAGFCFSQGGSPMLIGFAGYFGAACWGYLIYLLATWPKGIRVSFALLGALVVLSGLLWGRDILTLAILAVLTIIL LLPLKLSQNKMLTQFLRIVGLMIMLNALASPTVLLGLDGQGDAVMLAERSWIPAWIWVGLWLLTSACALYFAWRRVDNAA SR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26419; Mature: 26419
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEHQQKPPRSTSRFSSSKLTGLAASGVPSRGLFIIELVVALLITRIPYLSVPFKWLESY CCCCCCCCCCCHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FHELSHGIATILSSGVVSHIQLFPNGAGFCFSQGGSPMLIGFAGYFGAACWGYLIYLLAT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH WPKGIRVSFALLGALVVLSGLLWGRDILTLAILAVLTIILLLPLKLSQNKMLTQFLRIVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LMIMLNALASPTVLLGLDGQGDAVMLAERSWIPAWIWVGLWLLTSACALYFAWRRVDNAA HHHHHHHHCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC SR CC >Mature Secondary Structure MLEHQQKPPRSTSRFSSSKLTGLAASGVPSRGLFIIELVVALLITRIPYLSVPFKWLESY CCCCCCCCCCCHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FHELSHGIATILSSGVVSHIQLFPNGAGFCFSQGGSPMLIGFAGYFGAACWGYLIYLLAT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH WPKGIRVSFALLGALVVLSGLLWGRDILTLAILAVLTIILLLPLKLSQNKMLTQFLRIVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LMIMLNALASPTVLLGLDGQGDAVMLAERSWIPAWIWVGLWLLTSACALYFAWRRVDNAA HHHHHHHHCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC SR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA