| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174079
Identifier: 126174079
GI number: 126174079
Start: 2152524
End: 2153594
Strand: Reverse
Name: 126174079
Synonym: Sbal_1853
Alternate gene names: NA
Gene position: 2153594-2152524 (Counterclockwise)
Preceding gene: 126174081
Following gene: 126174077
Centisome position: 42.0
GC content: 35.57
Gene sequence:
>1071_bases ATGGATTTTATTGAAAGGATTGATGTTCTCTCTAAACGTATCCCACAAATTGCTAGTAGCCTTCAAACCGAAGAAGCAAC AAAGAATGCCTTAATCATGCCCTTCCTGCATACAGTTTTGGGATATGACGTATTCAATCCCAATGAAGTTGTTCCGGAAT TTACTGCCGATACTGCCTGTAAGAAAGGTGAAAAAGTAGATTATGCTTTAATGAAAGATGGCGAAGTACAAATACTGATA GAATGTAAAAAGTACAACGAAAAACTATCAATAAAACATGCTGCTCAGCTATTTCGTTATTTTTCAGTAACGAACGCCCG TCTTGCCATTTTGACAAATGGCACTGAGTATCAGTTCTATACCGACCTAGATGCTCCAAATAAAATGGATGAAAAACCAT TTCTTACACTGGATCTGGAAAATATTGACGAGCATTTAATTCCTGAAGTAAAGAAACTCACCAAAAGTTCATTCGATGTA GATTCCATCGTAAGTGCAGCAGGTGAACTTAAGTACTTAAGCCAAATAAAACGTATCATAAGCGAGCAGTTTAAAGAACC TGAGGACGAATTCATCCGCTTTTTTGCTTCAAGAGCCTACGATGGTGTTCTCACACCCAAAGTGAAACACCAATTCGCAG AGATTACGCATAAAGCACTAAGACAATTTCTAAGCGACAGTATCAATGAACGATTAAAATCTGCTATTGGTGGGGATAAG CCAGTTGTTGAAGATAAAAACTCAAGCGAGTCTTTAATAATTTCCGATGACGAAAAAATTAAAGTCATTACAACAGATGA AGAAATAGAAGGTTTCAATATTATTAAAGCTATCTTGAGACAGAAATTAGAAGTAAATAGAATTATTGCGAGAGATACAC AAAGCTACTTTGGTGTGTTACTAGATGACAACAATCGTAAGCCTTTATGTCGATTGCACTTTAATGCTAAACAAAAATAC CTTGGATTAATGGATGCTAATAAAAATGAAACTCGTCATCCCATTAGTTCAGTAGACGATATTTTTAGTTATAGTGAACA ACTACTTACTACAGTCACTTTTTACGAGTAA
Upstream 100 bases:
>100_bases ATAACTGCACGTACGGTTTAAACGATTATGAACTTACAAACCGCTGCAAATTCACTGGAATAAAAAATAAGCAACAGAGT ACAACAAGAGGAAATGTGAA
Downstream 100 bases:
>100_bases TAATTTAAATACTAGCGGAGCAGTATTGCGGGCAGAACTGCCCGCTAGTTTCCTTCTTGCGATGAAATGACTTTATTACT CTCATCTAAATCGACGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MDFIERIDVLSKRIPQIASSLQTEEATKNALIMPFLHTVLGYDVFNPNEVVPEFTADTACKKGEKVDYALMKDGEVQILI ECKKYNEKLSIKHAAQLFRYFSVTNARLAILTNGTEYQFYTDLDAPNKMDEKPFLTLDLENIDEHLIPEVKKLTKSSFDV DSIVSAAGELKYLSQIKRIISEQFKEPEDEFIRFFASRAYDGVLTPKVKHQFAEITHKALRQFLSDSINERLKSAIGGDK PVVEDKNSSESLIISDDEKIKVITTDEEIEGFNIIKAILRQKLEVNRIIARDTQSYFGVLLDDNNRKPLCRLHFNAKQKY LGLMDANKNETRHPISSVDDIFSYSEQLLTTVTFYE
Sequences:
>Translated_356_residues MDFIERIDVLSKRIPQIASSLQTEEATKNALIMPFLHTVLGYDVFNPNEVVPEFTADTACKKGEKVDYALMKDGEVQILI ECKKYNEKLSIKHAAQLFRYFSVTNARLAILTNGTEYQFYTDLDAPNKMDEKPFLTLDLENIDEHLIPEVKKLTKSSFDV DSIVSAAGELKYLSQIKRIISEQFKEPEDEFIRFFASRAYDGVLTPKVKHQFAEITHKALRQFLSDSINERLKSAIGGDK PVVEDKNSSESLIISDDEKIKVITTDEEIEGFNIIKAILRQKLEVNRIIARDTQSYFGVLLDDNNRKPLCRLHFNAKQKY LGLMDANKNETRHPISSVDDIFSYSEQLLTTVTFYE >Mature_356_residues MDFIERIDVLSKRIPQIASSLQTEEATKNALIMPFLHTVLGYDVFNPNEVVPEFTADTACKKGEKVDYALMKDGEVQILI ECKKYNEKLSIKHAAQLFRYFSVTNARLAILTNGTEYQFYTDLDAPNKMDEKPFLTLDLENIDEHLIPEVKKLTKSSFDV DSIVSAAGELKYLSQIKRIISEQFKEPEDEFIRFFASRAYDGVLTPKVKHQFAEITHKALRQFLSDSINERLKSAIGGDK PVVEDKNSSESLIISDDEKIKVITTDEEIEGFNIIKAILRQKLEVNRIIARDTQSYFGVLLDDNNRKPLCRLHFNAKQKY LGLMDANKNETRHPISSVDDIFSYSEQLLTTVTFYE
Specific function: Unknown
COG id: COG4748
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40812; Mature: 40812
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFIERIDVLSKRIPQIASSLQTEEATKNALIMPFLHTVLGYDVFNPNEVVPEFTADTAC CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH KKGEKVDYALMKDGEVQILIECKKYNEKLSIKHAAQLFRYFSVTNARLAILTNGTEYQFY CCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEE TDLDAPNKMDEKPFLTLDLENIDEHLIPEVKKLTKSSFDVDSIVSAAGELKYLSQIKRII ECCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SEQFKEPEDEFIRFFASRAYDGVLTPKVKHQFAEITHKALRQFLSDSINERLKSAIGGDK HHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PVVEDKNSSESLIISDDEKIKVITTDEEIEGFNIIKAILRQKLEVNRIIARDTQSYFGVL CCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE LDDNNRKPLCRLHFNAKQKYLGLMDANKNETRHPISSVDDIFSYSEQLLTTVTFYE EECCCCCCEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDFIERIDVLSKRIPQIASSLQTEEATKNALIMPFLHTVLGYDVFNPNEVVPEFTADTAC CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH KKGEKVDYALMKDGEVQILIECKKYNEKLSIKHAAQLFRYFSVTNARLAILTNGTEYQFY CCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEE TDLDAPNKMDEKPFLTLDLENIDEHLIPEVKKLTKSSFDVDSIVSAAGELKYLSQIKRII ECCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SEQFKEPEDEFIRFFASRAYDGVLTPKVKHQFAEITHKALRQFLSDSINERLKSAIGGDK HHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PVVEDKNSSESLIISDDEKIKVITTDEEIEGFNIIKAILRQKLEVNRIIARDTQSYFGVL CCCCCCCCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEE LDDNNRKPLCRLHFNAKQKYLGLMDANKNETRHPISSVDDIFSYSEQLLTTVTFYE EECCCCCCEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA