| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174072
Identifier: 126174072
GI number: 126174072
Start: 2145417
End: 2147039
Strand: Direct
Name: 126174072
Synonym: Sbal_1846
Alternate gene names: NA
Gene position: 2145417-2147039 (Clockwise)
Preceding gene: 126174070
Following gene: 126174076
Centisome position: 41.84
GC content: 48.31
Gene sequence:
>1623_bases ATGATAATAACTTGGGAGAAAGTTGTGAAAAATATCATCTTAGCCACAAGTCTGATGGCCACTATCTCATTACCCGTCTT AGCTGAAACCGCATTTGTGCAAAGCCTCGATCTCGCGCAATACCGAACCGATGTTAAAACCTTAGCCAGTGACGCCTTCG GTGGACGTGCGCCTTTGTCTGAAGGTGAAACCTTAACTTTAGACTATTTAGTGAAAGCATTTAAAGATATGGGTCTCAAA CCCGGATTTGGCGACAGTTATCTGCAGGCTGTGCCTTTGGCGCAAATTAGCGCAGATCAAAATATGCAGCTTGATATCGG CGGACTTAAATTTGCCAATGGTAGTGAATTTACCGCGAGAACCCAAAGAATCGCTGAAACCGTGAGCCTGAATAAAAGCG ATGTGGTGTTTGTCGGCTACGGGATCAACGCGCCCGAATATGGCTGGAATGATTACCAAGGGTTAGATGTAAAAGGCAAA ACCGTTATCGTGCTTGTGAATGATCCTGGCTTTGCGACTCAAGACCCTGCGGTATTTAAAGGCAATGCCATGACCTATTA CGGTCGCTGGACTTATAAGTATGAGGAAGCCGCGCGTCAAGGCGCCGAGGCTGTGTTTATTGTTCACGAAACCGCGCCTG CCGCCTATGGCTGGGGTGTGGTGCAAAACTCCAACACGGGCACTAAGTTCACTCTGGTCGATGCCAATAATAACCAAGGC CAAGTTGGCGTCATGGGTTGGGTACAGCACGAAACCGCGCAAAAAATCTTTACTAAAGCAGGATTGGATTTTGATACCTT AAAGCAGCAAGCTGCCAAGCCAAACTTTAAGGCGATCCCACTTAAGTTGAGCGCCCAGCTCACGTTAAACAATAAAATTG AACGCGCCGAGTCCCATAACGTCGCGGCTTTACTGCCAGGTAAAACGCGCCCCGACGAAGTGGTGATGATGCATGCCCAT TGGGATCATCTTGGCACTGTGATTGAAGACGGTAAGTCAGAGATTTTGAACGGAGCGGTCGATAATGCCAGCGGTGTGGC GGGGGTTTTAGCCTTGGCGCGTTACTTCAAACAGCAAGCCAAGACGGCGCCACTGGATCGCTCGGTGCTCTTCAGTGCCT TTACGGCGGAAGAAACCGGTCTGATCGGTGCACAGCATTTTGCTCAGCATCCGAGTGTGCCAACGAAAAACATCGTCGCC TTTTTAAATATCGATGGCATGAATGTGAATAAGGGCGTGGATTACATTTTGCGTTATGGTGAAGACGTGTCTGAGTTGGA GCAATACTTAGATATCGCCGCGAAGGCCCAAGAGCGTTCAGTTAAAGCCGATCCAAGACCGCAGAATGGGTTGATGTTTA GATCGGACCACTTTGCGCTGGCACAACAAGGTGTACCTGGATTGCTATTTATGAGCCTTGGGGATACCGATCCTGATTAT ATCGCCCATAAATATCACAAGCCTGCCGATGATTATGATCCAAGCTGGAATTTAGGTGGTGTAAGCCAAGATCTAGATCT CATCGCCAGTATGATTACCAGCTTAGCCAATAGTACCGATTGGCCCCATTGGCTTGAGTCATCTGACTTTAAAGCCAAGC GCGAGCAAGATGGGCGTAAATAG
Upstream 100 bases:
>100_bases TGAACACCGTTTGTGCTTGGGCAGCAGCGACTCCGTTTGCGCTAAGACTTCCATCATAAACTAAAGATGATATGGTAAAG TCTATCCTTAAAATCAAATA
Downstream 100 bases:
>100_bases TGTTAATGAGTTGAATCATGAGGGCGCCAGTAGGTGCCCTTATTTTTGGACACTGATTTTAGCTGAGGATTGAGTGATAG TTTTAGCTAAGCGTGGGCAA
Product: peptidase M28
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; Glutamate Carboxypeptidase II; M20/M25/M40 Family Peptidase; Aminopeptidase Family; M28 Family Aminopeptidase; M23B Family Peptidase; LB Protein; Protein Containing Aminopeptidase Domain; Component Of l Biopolymer Transport System; WD40-Like Beta Propeller; PDZ Domain-Containing Protein
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MIITWEKVVKNIILATSLMATISLPVLAETAFVQSLDLAQYRTDVKTLASDAFGGRAPLSEGETLTLDYLVKAFKDMGLK PGFGDSYLQAVPLAQISADQNMQLDIGGLKFANGSEFTARTQRIAETVSLNKSDVVFVGYGINAPEYGWNDYQGLDVKGK TVIVLVNDPGFATQDPAVFKGNAMTYYGRWTYKYEEAARQGAEAVFIVHETAPAAYGWGVVQNSNTGTKFTLVDANNNQG QVGVMGWVQHETAQKIFTKAGLDFDTLKQQAAKPNFKAIPLKLSAQLTLNNKIERAESHNVAALLPGKTRPDEVVMMHAH WDHLGTVIEDGKSEILNGAVDNASGVAGVLALARYFKQQAKTAPLDRSVLFSAFTAEETGLIGAQHFAQHPSVPTKNIVA FLNIDGMNVNKGVDYILRYGEDVSELEQYLDIAAKAQERSVKADPRPQNGLMFRSDHFALAQQGVPGLLFMSLGDTDPDY IAHKYHKPADDYDPSWNLGGVSQDLDLIASMITSLANSTDWPHWLESSDFKAKREQDGRK
Sequences:
>Translated_540_residues MIITWEKVVKNIILATSLMATISLPVLAETAFVQSLDLAQYRTDVKTLASDAFGGRAPLSEGETLTLDYLVKAFKDMGLK PGFGDSYLQAVPLAQISADQNMQLDIGGLKFANGSEFTARTQRIAETVSLNKSDVVFVGYGINAPEYGWNDYQGLDVKGK TVIVLVNDPGFATQDPAVFKGNAMTYYGRWTYKYEEAARQGAEAVFIVHETAPAAYGWGVVQNSNTGTKFTLVDANNNQG QVGVMGWVQHETAQKIFTKAGLDFDTLKQQAAKPNFKAIPLKLSAQLTLNNKIERAESHNVAALLPGKTRPDEVVMMHAH WDHLGTVIEDGKSEILNGAVDNASGVAGVLALARYFKQQAKTAPLDRSVLFSAFTAEETGLIGAQHFAQHPSVPTKNIVA FLNIDGMNVNKGVDYILRYGEDVSELEQYLDIAAKAQERSVKADPRPQNGLMFRSDHFALAQQGVPGLLFMSLGDTDPDY IAHKYHKPADDYDPSWNLGGVSQDLDLIASMITSLANSTDWPHWLESSDFKAKREQDGRK >Mature_540_residues MIITWEKVVKNIILATSLMATISLPVLAETAFVQSLDLAQYRTDVKTLASDAFGGRAPLSEGETLTLDYLVKAFKDMGLK PGFGDSYLQAVPLAQISADQNMQLDIGGLKFANGSEFTARTQRIAETVSLNKSDVVFVGYGINAPEYGWNDYQGLDVKGK TVIVLVNDPGFATQDPAVFKGNAMTYYGRWTYKYEEAARQGAEAVFIVHETAPAAYGWGVVQNSNTGTKFTLVDANNNQG QVGVMGWVQHETAQKIFTKAGLDFDTLKQQAAKPNFKAIPLKLSAQLTLNNKIERAESHNVAALLPGKTRPDEVVMMHAH WDHLGTVIEDGKSEILNGAVDNASGVAGVLALARYFKQQAKTAPLDRSVLFSAFTAEETGLIGAQHFAQHPSVPTKNIVA FLNIDGMNVNKGVDYILRYGEDVSELEQYLDIAAKAQERSVKADPRPQNGLMFRSDHFALAQQGVPGLLFMSLGDTDPDY IAHKYHKPADDYDPSWNLGGVSQDLDLIASMITSLANSTDWPHWLESSDFKAKREQDGRK
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59090; Mature: 59090
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITWEKVVKNIILATSLMATISLPVLAETAFVQSLDLAQYRTDVKTLASDAFGGRAPLS CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EGETLTLDYLVKAFKDMGLKPGFGDSYLQAVPLAQISADQNMQLDIGGLKFANGSEFTAR CCCEEEHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCEEEECCEEECCCCCHHHH TQRIAETVSLNKSDVVFVGYGINAPEYGWNDYQGLDVKGKTVIVLVNDPGFATQDPAVFK HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE GNAMTYYGRWTYKYEEAARQGAEAVFIVHETAPAAYGWGVVQNSNTGTKFTLVDANNNQG CCEEEEEEEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCEEEEEECCCCCC QVGVMGWVQHETAQKIFTKAGLDFDTLKQQAAKPNFKAIPLKLSAQLTLNNKIERAESHN CEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCHHHHHCCCC VAALLPGKTRPDEVVMMHAHWDHLGTVIEDGKSEILNGAVDNASGVAGVLALARYFKQQA EEEEECCCCCCCCEEEEEECHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KTAPLDRSVLFSAFTAEETGLIGAQHFAQHPSVPTKNIVAFLNIDGMNVNKGVDYILRYG CCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCC EDVSELEQYLDIAAKAQERSVKADPRPQNGLMFRSDHFALAQQGVPGLLFMSLGDTDPDY CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHCCCCEEEEEECCCCCHHH IAHKYHKPADDYDPSWNLGGVSQDLDLIASMITSLANSTDWPHWLESSDFKAKREQDGRK HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure MIITWEKVVKNIILATSLMATISLPVLAETAFVQSLDLAQYRTDVKTLASDAFGGRAPLS CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EGETLTLDYLVKAFKDMGLKPGFGDSYLQAVPLAQISADQNMQLDIGGLKFANGSEFTAR CCCEEEHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCEEEECCEEECCCCCHHHH TQRIAETVSLNKSDVVFVGYGINAPEYGWNDYQGLDVKGKTVIVLVNDPGFATQDPAVFK HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE GNAMTYYGRWTYKYEEAARQGAEAVFIVHETAPAAYGWGVVQNSNTGTKFTLVDANNNQG CCEEEEEEEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCEEEEEECCCCCC QVGVMGWVQHETAQKIFTKAGLDFDTLKQQAAKPNFKAIPLKLSAQLTLNNKIERAESHN CEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCHHHHHCCCC VAALLPGKTRPDEVVMMHAHWDHLGTVIEDGKSEILNGAVDNASGVAGVLALARYFKQQA EEEEECCCCCCCCEEEEEECHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KTAPLDRSVLFSAFTAEETGLIGAQHFAQHPSVPTKNIVAFLNIDGMNVNKGVDYILRYG CCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCC EDVSELEQYLDIAAKAQERSVKADPRPQNGLMFRSDHFALAQQGVPGLLFMSLGDTDPDY CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHCCCCEEEEEECCCCCHHH IAHKYHKPADDYDPSWNLGGVSQDLDLIASMITSLANSTDWPHWLESSDFKAKREQDGRK HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA